RNA–Protein interactions for RNA: ENST00000533683.6

SAMD1-202, Transcript of sterile alpha motif domain containing 1, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene SAMD1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD1-202ENST00000533683 MAP3K2Q9Y2U5 619 aa35.23■■■■□ 3.23
SAMD1-202ENST00000533683 IBTKQ9P2D0 1353 aaPredicted RBP35.23■■■■□ 3.23
SAMD1-202ENST00000533683 ABCA3Q99758 1704 aa35.23■■■■□ 3.23
SAMD1-202ENST00000533683 HSP90AB1P08238 724 aaKnown RBP35.23■■■■□ 3.23
SAMD1-202ENST00000533683 KSR2Q6VAB6 950 aa35.23■■■■□ 3.23
SAMD1-202ENST00000533683 SSH3Q8TE77 659 aa35.23■■■■□ 3.23
SAMD1-202ENST00000533683 LRRCC1Q9C099 1032 aa35.23■■■■□ 3.23
SAMD1-202ENST00000533683 TOM1L2Q6ZVM7 507 aa35.22■■■■□ 3.23
SAMD1-202ENST00000533683 COL5A2P05997 1499 aaPredicted RBP35.22■■■■□ 3.23
SAMD1-202ENST00000533683 PDIA6Q15084 440 aa35.21■■■■□ 3.23
SAMD1-202ENST00000533683 C5P01031 1676 aa35.21■■■■□ 3.23
SAMD1-202ENST00000533683 OSBPL3Q9H4L5 887 aa35.21■■■■□ 3.23
SAMD1-202ENST00000533683 RTL5Q5HYW3 569 aaPredicted RBP35.2■■■■□ 3.23
SAMD1-202ENST00000533683 ZNF496Q96IT1 587 aaPredicted RBP35.2■■■■□ 3.22
SAMD1-202ENST00000533683 NHSL1Q5SYE7 1610 aa35.19■■■■□ 3.22
SAMD1-202ENST00000533683 SDSP20132 328 aa35.19■■■■□ 3.22
SAMD1-202ENST00000533683 PPP1R42Q7Z4L9 355 aa35.19■■■■□ 3.22
SAMD1-202ENST00000533683 PDE1AP54750 535 aa35.18■■■■□ 3.22
SAMD1-202ENST00000533683 POLA2Q14181 598 aa35.18■■■■□ 3.22
SAMD1-202ENST00000533683 PARP4Q9UKK3 1724 aaKnown RBP35.17■■■■□ 3.22
SAMD1-202ENST00000533683 SALL3Q9BXA9 1300 aa35.17■■■■□ 3.22
SAMD1-202ENST00000533683 ALDH1L1O75891 902 aa35.16■■■■□ 3.22
SAMD1-202ENST00000533683 CABP4P57796 275 aa35.15■■■■□ 3.22
SAMD1-202ENST00000533683 TTC5Q8N0Z6 440 aa35.15■■■■□ 3.22
SAMD1-202ENST00000533683 USP35Q9P2H5 1018 aa35.15■■■■□ 3.22
SAMD1-202ENST00000533683 ZCRB1Q8TBF4 217 aaKnown RBP35.14■■■■□ 3.22
SAMD1-202ENST00000533683 DDX58O95786 925 aaKnown RBP35.13■■■■□ 3.21
SAMD1-202ENST00000533683 SRGAP3O43295 1099 aa35.13■■■■□ 3.21
SAMD1-202ENST00000533683 AIMP1Q12904 312 aaKnown RBP35.13■■■■□ 3.21
SAMD1-202ENST00000533683 PCDH11XQ9BZA7 1347 aa35.12■■■■□ 3.21
SAMD1-202ENST00000533683 PCDH11YQ9BZA8 1340 aa35.12■■■■□ 3.21
SAMD1-202ENST00000533683 CARD10Q9BWT7 1032 aa35.12■■■■□ 3.21
SAMD1-202ENST00000533683 SNRPA1P09661 255 aaKnown RBP35.11■■■■□ 3.21
SAMD1-202ENST00000533683 CWF19L2Q2TBE0 894 aaKnown RBP35.11■■■■□ 3.21
SAMD1-202ENST00000533683 KIF2CQ99661 725 aa35.11■■■■□ 3.21
SAMD1-202ENST00000533683 NFKBIBQ15653 356 aa35.1■■■■□ 3.21
SAMD1-202ENST00000533683 FMNL2Q96PY5 1086 aa35.1■■■■□ 3.21
SAMD1-202ENST00000533683 C9orf78Q9NZ63 289 aaPredicted RBP35.1■■■■□ 3.21
SAMD1-202ENST00000533683 EIF5BO60841 1220 aaKnown RBP35.1■■■■□ 3.21
SAMD1-202ENST00000533683 LINS1Q8NG48 757 aa35.1■■■■□ 3.21
SAMD1-202ENST00000533683 USP16Q9Y5T5 823 aa35.1■■■■□ 3.21
SAMD1-202ENST00000533683 SURF6O75683 361 aaKnown RBP35.09■■■■□ 3.21
SAMD1-202ENST00000533683 MYL6BP14649 208 aa35.09■■■■□ 3.21
SAMD1-202ENST00000533683 MX1P20591 662 aa35.09■■■■□ 3.21
SAMD1-202ENST00000533683 SLKQ9H2G2 1235 aaPredicted RBP35.09■■■■□ 3.21
SAMD1-202ENST00000533683 STRN4Q9NRL3 753 aa35.09■■■■□ 3.21
SAMD1-202ENST00000533683 RAB11FIP3O75154 756 aa35.08■■■■□ 3.21
SAMD1-202ENST00000533683 IL2RBP14784 551 aa35.08■■■■□ 3.21
SAMD1-202ENST00000533683 TSHZ3Q63HK5 1081 aa35.08■■■■□ 3.21
SAMD1-202ENST00000533683 LARP1Q6PKG0 1096 aaKnown RBP35.08■■■■□ 3.21
SAMD1-202ENST00000533683 ANTXR1Q9H6X2 564 aa35.07■■■■□ 3.21
SAMD1-202ENST00000533683 EVA1CP58658 441 aa35.06■■■■□ 3.2
SAMD1-202ENST00000533683 MTX1Q13505 466 aa35.06■■■■□ 3.2
SAMD1-202ENST00000533683 STAP2Q9UGK3 403 aa35.06■■■■□ 3.2
SAMD1-202ENST00000533683 CASC1Q6TDU7 716 aa35.05■■■■□ 3.2
SAMD1-202ENST00000533683 XAGE3Q8WTP9 111 aa35.05■■■■□ 3.2
SAMD1-202ENST00000533683 IL1RAPL2Q9NP60 686 aa35.05■■■■□ 3.2
SAMD1-202ENST00000533683 LRP10Q7Z4F1 713 aa35.04■■■■□ 3.2
SAMD1-202ENST00000533683 RIC3Q7Z5B4 369 aa35.04■■■■□ 3.2
SAMD1-202ENST00000533683 COPS6Q7L5N1 327 aa35.04■■■■□ 3.2
SAMD1-202ENST00000533683 TUBGCP6Q96RT7 1819 aa35.03■■■■□ 3.2
SAMD1-202ENST00000533683 HSCBQ8IWL3 235 aa35.03■■■■□ 3.2
SAMD1-202ENST00000533683 RHPN1Q8TCX5 695 aa35.03■■■■□ 3.2
SAMD1-202ENST00000533683 SNX21Q969T3 373 aa35.03■■■■□ 3.2
SAMD1-202ENST00000533683 GLI3P10071 1580 aa35.02■■■■□ 3.2
SAMD1-202ENST00000533683 GRM8O00222 908 aa35.02■■■■□ 3.2
SAMD1-202ENST00000533683 NKX1-1Q15270 411 aaPredicted RBP35.02■■■■□ 3.2
SAMD1-202ENST00000533683 UTYO14607 1347 aa35.02■■■■□ 3.2
SAMD1-202ENST00000533683 IGKV5-2P06315 115 aa35.01■■■■□ 3.2
SAMD1-202ENST00000533683 HDAC5Q9UQL6 1122 aa35.01■■■■□ 3.2
SAMD1-202ENST00000533683 ERVV-2B6SEH9 535 aa35.01■■■■□ 3.19
SAMD1-202ENST00000533683 USP26Q9BXU7 913 aa35■■■■□ 3.19
SAMD1-202ENST00000533683 KIF1BPQ96EK5 621 aa35■■■■□ 3.19
SAMD1-202ENST00000533683 SHANK3Q9BYB0 1731 aa35■■■■□ 3.19
SAMD1-202ENST00000533683 PIP4K2AP48426 406 aaPredicted RBP34.99■■■■□ 3.19
SAMD1-202ENST00000533683 SPRYD3Q8NCJ5 442 aa34.98■■■■□ 3.19
SAMD1-202ENST00000533683 DDX54Q8TDD1 881 aaKnown RBP34.98■■■■□ 3.19
SAMD1-202ENST00000533683 HSP90AB4PQ58FF6 505 aa34.97■■■■□ 3.19
SAMD1-202ENST00000533683 AOX1Q06278 1338 aa34.97■■■■□ 3.19
SAMD1-202ENST00000533683 NEXNQ0ZGT2 675 aa34.97■■■■□ 3.19
SAMD1-202ENST00000533683 ANKRD13DQ6ZTN6 518 aa34.97■■■■□ 3.19
SAMD1-202ENST00000533683 METTL22Q9BUU2 404 aaPredicted RBP34.97■■■■□ 3.19
SAMD1-202ENST00000533683 NUTM1Q86Y26 1132 aa34.96■■■■□ 3.19
SAMD1-202ENST00000533683 KAZALD1Q96I82 304 aa34.96■■■■□ 3.19
SAMD1-202ENST00000533683 SUCLG2Q96I99 432 aa34.96■■■■□ 3.19
SAMD1-202ENST00000533683 LAMB4A4D0S4 1761 aa34.95■■■■□ 3.19
SAMD1-202ENST00000533683 NEURL1BA8MQ27 555 aa34.95■■■■□ 3.19
SAMD1-202ENST00000533683 FRAT2O75474 233 aaPredicted RBP34.94■■■■□ 3.18
SAMD1-202ENST00000533683 MYD88Q99836 296 aa34.94■■■■□ 3.18
SAMD1-202ENST00000533683 RBM42Q9BTD8 480 aaKnown RBP34.94■■■■□ 3.18
SAMD1-202ENST00000533683 ERC2O15083 957 aa34.93■■■■□ 3.18
SAMD1-202ENST00000533683 BTG4Q9NY30 223 aa34.93■■■■□ 3.18
SAMD1-202ENST00000533683 UBR2Q8IWV8 1755 aa34.92■■■■□ 3.18
SAMD1-202ENST00000533683 REC8O95072 547 aa34.92■■■■□ 3.18
SAMD1-202ENST00000533683 GCKRQ14397 625 aa34.92■■■■□ 3.18
SAMD1-202ENST00000533683 BICC1Q9H694 974 aaKnown RBP34.92■■■■□ 3.18
SAMD1-202ENST00000533683 TRIM6-TRIM34B2RNG4 842 aa34.91■■■■□ 3.18
SAMD1-202ENST00000533683 ROBO1Q9Y6N7 1651 aa34.9■■■■□ 3.18
SAMD1-202ENST00000533683 CD2BP2O95400 341 aaKnown RBP34.9■■■■□ 3.18
SAMD1-202ENST00000533683 OS9Q13438 667 aaPredicted RBP34.9■■■■□ 3.18
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms