RNA–Protein interactions for RNA: ENST00000533657.5

CAPRIN1-215, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 2,774 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-215ENST00000533657 ZNF496Q96IT1 587 aaPredicted RBP13.18□□□□□ -0.3
CAPRIN1-215ENST00000533657 NUP188Q5SRE5 1749 aa13.17□□□□□ -0.3
CAPRIN1-215ENST00000533657 TSPYL6Q8N831 410 aa13.17□□□□□ -0.3
CAPRIN1-215ENST00000533657 IBTKQ9P2D0 1353 aaPredicted RBP13.16□□□□□ -0.3
CAPRIN1-215ENST00000533657 SLC39A6Q13433 755 aa13.16□□□□□ -0.3
CAPRIN1-215ENST00000533657 CCDC30Q5VVM6 783 aa13.16□□□□□ -0.3
CAPRIN1-215ENST00000533657 ASAP1Q9ULH1 1129 aa13.16□□□□□ -0.3
CAPRIN1-215ENST00000533657 BCORQ6W2J9 1755 aa13.16□□□□□ -0.3
CAPRIN1-215ENST00000533657 PXDNLA1KZ92 1463 aa13.16□□□□□ -0.3
CAPRIN1-215ENST00000533657 C4BP0C0L5 1744 aa13.16□□□□□ -0.3
CAPRIN1-215ENST00000533657 ACSBG1Q96GR2 724 aa13.15□□□□□ -0.3
CAPRIN1-215ENST00000533657 KIF16BQ96L93 1317 aa13.15□□□□□ -0.3
CAPRIN1-215ENST00000533657 KCNQ2O43526 872 aa13.15□□□□□ -0.3
CAPRIN1-215ENST00000533657 MRPL50Q8N5N7 158 aaKnown RBP13.15□□□□□ -0.31
CAPRIN1-215ENST00000533657 ARHGAP45Q92619 1136 aa13.15□□□□□ -0.31
CAPRIN1-215ENST00000533657 PLSCR1O15162 318 aa13.14□□□□□ -0.31
CAPRIN1-215ENST00000533657 KRT24Q2M2I5 525 aa13.14□□□□□ -0.31
CAPRIN1-215ENST00000533657 ARFGEF2Q9Y6D5 1785 aa13.14□□□□□ -0.31
CAPRIN1-215ENST00000533657 SCN7AQ01118 1682 aa13.13□□□□□ -0.31
CAPRIN1-215ENST00000533657 SSH1Q8WYL5 1049 aa13.13□□□□□ -0.31
CAPRIN1-215ENST00000533657 ANKRD36CQ5JPF3 1778 aa13.13□□□□□ -0.31
CAPRIN1-215ENST00000533657 SLC27A3Q5K4L6 730 aa13.13□□□□□ -0.31
CAPRIN1-215ENST00000533657 HDGFL1Q5TGJ6 251 aa13.13□□□□□ -0.31
CAPRIN1-215ENST00000533657 SYTL4Q96C24 671 aaPredicted RBP13.13□□□□□ -0.31
CAPRIN1-215ENST00000533657 SLC4A9Q96Q91 983 aa13.13□□□□□ -0.31
CAPRIN1-215ENST00000533657 PTPRCP08575 1304 aa13.13□□□□□ -0.31
CAPRIN1-215ENST00000533657 UBR3Q6ZT12 1888 aa13.13□□□□□ -0.31
CAPRIN1-215ENST00000533657 LOC102724428A0A0B4J2F2 783 aa13.12□□□□□ -0.31
CAPRIN1-215ENST00000533657 SIK1P57059 783 aa13.12□□□□□ -0.31
CAPRIN1-215ENST00000533657 CNTNAP4Q9C0A0 1308 aa13.12□□□□□ -0.31
CAPRIN1-215ENST00000533657 DBF4Q9UBU7 674 aaPredicted RBP13.12□□□□□ -0.31
CAPRIN1-215ENST00000533657 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.12□□□□□ -0.31
CAPRIN1-215ENST00000533657 DDX21Q9NR30 783 aaKnown RBP eCLIP13.12□□□□□ -0.31
CAPRIN1-215ENST00000533657 MYH14Q7Z406 1995 aaKnown RBP13.11□□□□□ -0.31
CAPRIN1-215ENST00000533657 RC3H1Q5TC82 1133 aaKnown RBP13.11□□□□□ -0.31
CAPRIN1-215ENST00000533657 LRP10Q7Z4F1 713 aa13.11□□□□□ -0.31
CAPRIN1-215ENST00000533657 CCDC125Q86Z20 511 aa13.11□□□□□ -0.31
CAPRIN1-215ENST00000533657 RGL2O15211 777 aa13.11□□□□□ -0.31
CAPRIN1-215ENST00000533657 CYP19A1P11511 503 aaPredicted RBP13.11□□□□□ -0.31
CAPRIN1-215ENST00000533657 RRP1P56182 461 aaKnown RBP13.11□□□□□ -0.31
CAPRIN1-215ENST00000533657 PDIA6Q15084 440 aa13.11□□□□□ -0.31
CAPRIN1-215ENST00000533657 STK31Q9BXU1 1019 aa13.11□□□□□ -0.31
CAPRIN1-215ENST00000533657 HYPKQ9NX55 129 aa13.11□□□□□ -0.31
CAPRIN1-215ENST00000533657 C4AP0C0L4 1744 aa13.11□□□□□ -0.31
CAPRIN1-215ENST00000533657 STARD3NLO95772 234 aa13.1□□□□□ -0.31
CAPRIN1-215ENST00000533657 SMC4Q9NTJ3 1288 aa13.1□□□□□ -0.31
CAPRIN1-215ENST00000533657 MS4A1P11836 297 aa13.1□□□□□ -0.31
CAPRIN1-215ENST00000533657 FAM182BQ5T319 152 aa13.1□□□□□ -0.31
CAPRIN1-215ENST00000533657 TUBGCP6Q96RT7 1819 aa13.1□□□□□ -0.31
CAPRIN1-215ENST00000533657 PTF1AQ7RTS3 328 aa13.09□□□□□ -0.31
CAPRIN1-215ENST00000533657 KAT6BQ8WYB5 2073 aa13.09□□□□□ -0.31
CAPRIN1-215ENST00000533657 IPO8O15397 1037 aaKnown RBP13.09□□□□□ -0.31
CAPRIN1-215ENST00000533657 ATP10DQ9P241 1426 aa13.09□□□□□ -0.31
CAPRIN1-215ENST00000533657 TRIM37O94972 964 aa13.09□□□□□ -0.31
CAPRIN1-215ENST00000533657 PDE3AQ14432 1141 aa13.09□□□□□ -0.31
CAPRIN1-215ENST00000533657 USP16Q9Y5T5 823 aa13.09□□□□□ -0.31
CAPRIN1-215ENST00000533657 PRAMEF22A3QJZ6 481 aa13.08□□□□□ -0.32
CAPRIN1-215ENST00000533657 ELL2O00472 640 aaPredicted RBP13.08□□□□□ -0.32
CAPRIN1-215ENST00000533657 PTCD1O75127 700 aaKnown RBP13.08□□□□□ -0.32
CAPRIN1-215ENST00000533657 DNAJC10Q8IXB1 793 aa13.08□□□□□ -0.32
CAPRIN1-215ENST00000533657 BCAR3O75815 825 aa13.08□□□□□ -0.32
CAPRIN1-215ENST00000533657 ITPK1Q13572 414 aa13.08□□□□□ -0.32
CAPRIN1-215ENST00000533657 RBM42Q9BTD8 480 aaKnown RBP13.08□□□□□ -0.32
CAPRIN1-215ENST00000533657 API5Q9BZZ5 524 aaKnown RBP13.08□□□□□ -0.32
CAPRIN1-215ENST00000533657 CHPF2Q9P2E5 772 aa13.08□□□□□ -0.32
CAPRIN1-215ENST00000533657 ABCC4O15439 1325 aa13.07□□□□□ -0.32
CAPRIN1-215ENST00000533657 ATP6V1AP38606 617 aa13.07□□□□□ -0.32
CAPRIN1-215ENST00000533657 IL6STP40189 918 aaPredicted RBP13.07□□□□□ -0.32
CAPRIN1-215ENST00000533657 ZKSCAN2Q63HK3 967 aa13.07□□□□□ -0.32
CAPRIN1-215ENST00000533657 ZMYND15Q9H091 742 aa13.07□□□□□ -0.32
CAPRIN1-215ENST00000533657 SLC4A2P04920 1241 aa13.06□□□□□ -0.32
CAPRIN1-215ENST00000533657 INTS5Q6P9B9 1019 aaKnown RBP13.06□□□□□ -0.32
CAPRIN1-215ENST00000533657 CCDC87Q9NVE4 849 aa13.06□□□□□ -0.32
CAPRIN1-215ENST00000533657 NBPF26B4DH59 902 aa13.06□□□□□ -0.32
CAPRIN1-215ENST00000533657 NBPF14Q5TI25 921 aa13.06□□□□□ -0.32
CAPRIN1-215ENST00000533657 NBPF10Q6P3W6 841 aaKnown RBP13.06□□□□□ -0.32
CAPRIN1-215ENST00000533657 ATF7IPQ6VMQ6 1270 aa13.06□□□□□ -0.32
CAPRIN1-215ENST00000533657 NBPF15Q8N660 670 aa13.06□□□□□ -0.32
CAPRIN1-215ENST00000533657 CCNL1Q9UK58 526 aaPredicted RBP13.06□□□□□ -0.32
CAPRIN1-215ENST00000533657 COL24A1Q17RW2 1714 aa13.06□□□□□ -0.32
CAPRIN1-215ENST00000533657 FLIIQ13045 1269 aa13.05□□□□□ -0.32
CAPRIN1-215ENST00000533657 LINC00116Q8NCU8 138 aa13.05□□□□□ -0.32
CAPRIN1-215ENST00000533657 NUP98P52948 1817 aa13.05□□□□□ -0.32
CAPRIN1-215ENST00000533657 NOB1Q9ULX3 412 aaKnown RBP13.05□□□□□ -0.32
CAPRIN1-215ENST00000533657 AFDNP55196 1824 aaKnown RBP13.05□□□□□ -0.32
CAPRIN1-215ENST00000533657 EIF2S2P20042 333 aaKnown RBP13.04□□□□□ -0.32
CAPRIN1-215ENST00000533657 CRKLP46109 303 aaKnown RBP13.04□□□□□ -0.32
CAPRIN1-215ENST00000533657 ADCY9O60503 1353 aa13.04□□□□□ -0.32
CAPRIN1-215ENST00000533657 EIF5P55010 431 aaKnown RBP13.03□□□□□ -0.32
CAPRIN1-215ENST00000533657 AAMPQ13685 434 aa13.03□□□□□ -0.32
CAPRIN1-215ENST00000533657 TXNRD1Q16881 649 aa13.03□□□□□ -0.32
CAPRIN1-215ENST00000533657 CAMKK2Q96RR4 588 aa13.03□□□□□ -0.32
CAPRIN1-215ENST00000533657 LAMB2P55268 1798 aa13.03□□□□□ -0.32
CAPRIN1-215ENST00000533657 A0A087WZG4 1122 aa13.03□□□□□ -0.32
CAPRIN1-215ENST00000533657 DDX58O95786 925 aaKnown RBP13.03□□□□□ -0.32
CAPRIN1-215ENST00000533657 APBA3O96018 575 aa13.03□□□□□ -0.32
CAPRIN1-215ENST00000533657 TRIM27P14373 513 aa13.03□□□□□ -0.32
CAPRIN1-215ENST00000533657 ADRA2BP18089 450 aa13.03□□□□□ -0.32
CAPRIN1-215ENST00000533657 PROSER3Q2NL68 480 aa13.03□□□□□ -0.32
CAPRIN1-215ENST00000533657 G2E3Q7L622 706 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms