RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 VEGFAP15692 232 aaPredicted RBP17.74■□□□□ 0.43
COPB1-209ENST00000533096 LMNB1P20700 586 aa17.74■□□□□ 0.43
COPB1-209ENST00000533096 TTLL6Q8N841 843 aa17.74■□□□□ 0.43
COPB1-209ENST00000533096 NARFQ9UHQ1 456 aa17.74■□□□□ 0.43
COPB1-209ENST00000533096 SOS1Q07889 1333 aaPredicted RBP17.73■□□□□ 0.43
COPB1-209ENST00000533096 H0YIN7 160 aa17.73■□□□□ 0.43
COPB1-209ENST00000533096 TNS4Q8IZW8 715 aa17.73■□□□□ 0.43
COPB1-209ENST00000533096 CCDC24Q8N4L8 307 aa17.73■□□□□ 0.43
COPB1-209ENST00000533096 JMYQ8N9B5 988 aa17.73■□□□□ 0.43
COPB1-209ENST00000533096 ZBTB1Q9Y2K1 713 aa17.73■□□□□ 0.43
COPB1-209ENST00000533096 C4AP0C0L4 1744 aa17.72■□□□□ 0.43
COPB1-209ENST00000533096 PRELPP51888 382 aa17.72■□□□□ 0.43
COPB1-209ENST00000533096 ZNF622Q969S3 477 aaKnown RBP eCLIP17.72■□□□□ 0.436e-21■□□□□ 8.9
COPB1-209ENST00000533096 ZNF330Q9Y3S2 320 aaPredicted RBP17.72■□□□□ 0.43
COPB1-209ENST00000533096 GLTPD2A6NH11 291 aa17.71■□□□□ 0.43
COPB1-209ENST00000533096 MTHFSDQ2M296 383 aaKnown RBP17.71■□□□□ 0.43
COPB1-209ENST00000533096 BCL2L12Q9HB09 334 aa17.71■□□□□ 0.43
COPB1-209ENST00000533096 DPY19L2Q6NUT2 758 aa17.69■□□□□ 0.42
COPB1-209ENST00000533096 C21orf2O43822 256 aa17.68■□□□□ 0.42
COPB1-209ENST00000533096 STARD3NLO95772 234 aa17.68■□□□□ 0.42
COPB1-209ENST00000533096 TTC5Q8N0Z6 440 aa17.68■□□□□ 0.42
COPB1-209ENST00000533096 TBC1D2BQ9UPU7 963 aa17.68■□□□□ 0.42
COPB1-209ENST00000533096 KIAA1551Q9HCM1 1747 aa17.67■□□□□ 0.42
COPB1-209ENST00000533096 NPHP1O15259 732 aa17.67■□□□□ 0.42
COPB1-209ENST00000533096 COL15A1P39059 1388 aa17.66■□□□□ 0.42
COPB1-209ENST00000533096 NFKBIEO00221 500 aa17.66■□□□□ 0.42
COPB1-209ENST00000533096 TBC1D9BQ66K14 1250 aa17.66■□□□□ 0.42
COPB1-209ENST00000533096 ANKRD26Q9UPS8 1709 aa17.65■□□□□ 0.42
COPB1-209ENST00000533096 DIAPH1O60610 1272 aaKnown RBP17.65■□□□□ 0.42
COPB1-209ENST00000533096 HSPA1AP0DMV8 641 aaKnown RBP17.65■□□□□ 0.42
COPB1-209ENST00000533096 HSPA1BP0DMV9 641 aaKnown RBP17.65■□□□□ 0.42
COPB1-209ENST00000533096 ERFEQ4G0M1 354 aa17.65■□□□□ 0.42
COPB1-209ENST00000533096 CC2D1BQ5T0F9 858 aaKnown RBP17.65■□□□□ 0.42
COPB1-209ENST00000533096 KIF13BQ9NQT8 1826 aa17.64■□□□□ 0.41
COPB1-209ENST00000533096 A0A087WZG4 1122 aa17.64■□□□□ 0.41
COPB1-209ENST00000533096 POTECB2RU33 542 aa17.64■□□□□ 0.41
COPB1-209ENST00000533096 U2SURPO15042 1029 aaKnown RBP17.64■□□□□ 0.41
COPB1-209ENST00000533096 NPM2Q86SE8 214 aaKnown RBP17.64■□□□□ 0.41
COPB1-209ENST00000533096 VSIG10Q8N0Z9 540 aa17.64■□□□□ 0.41
COPB1-209ENST00000533096 MYH14Q7Z406 1995 aaKnown RBP17.63■□□□□ 0.41
COPB1-209ENST00000533096 PDE6BP35913 854 aa17.63■□□□□ 0.41
COPB1-209ENST00000533096 EIF5P55010 431 aaKnown RBP17.63■□□□□ 0.41
COPB1-209ENST00000533096 AMER1Q5JTC6 1135 aaPredicted RBP17.63■□□□□ 0.41
COPB1-209ENST00000533096 A1BGP04217 495 aa17.62■□□□□ 0.41
COPB1-209ENST00000533096 TEFQ10587 303 aa17.62■□□□□ 0.41
COPB1-209ENST00000533096 ZNF496Q96IT1 587 aaPredicted RBP17.62■□□□□ 0.41
COPB1-209ENST00000533096 BRIP1Q9BX63 1249 aa17.62■□□□□ 0.41
COPB1-209ENST00000533096 ZC3H4Q9UPT8 1303 aaKnown RBP17.62■□□□□ 0.41
COPB1-209ENST00000533096 CARMIL3Q8ND23 1372 aa17.62■□□□□ 0.41
COPB1-209ENST00000533096 IL17REQ8NFR9 667 aa17.61■□□□□ 0.41
COPB1-209ENST00000533096 MKRN1Q9UHC7 482 aaKnown RBP17.61■□□□□ 0.41
COPB1-209ENST00000533096 DDNO94850 711 aaPredicted RBP17.6■□□□□ 0.41
COPB1-209ENST00000533096 PRR5LQ6MZQ0 368 aa17.6■□□□□ 0.41
COPB1-209ENST00000533096 SETDB2Q96T68 719 aa17.6■□□□□ 0.41
COPB1-209ENST00000533096 COL5A3P25940 1745 aaPredicted RBP17.59■□□□□ 0.41
COPB1-209ENST00000533096 ZNF831Q5JPB2 1677 aa17.59■□□□□ 0.41
COPB1-209ENST00000533096 CCER1Q8TC90 406 aaPredicted RBP17.59■□□□□ 0.41
COPB1-209ENST00000533096 TEX13AQ9BXU3 409 aaPredicted RBP17.59■□□□□ 0.41
COPB1-209ENST00000533096 GNAT3A8MTJ3 354 aa17.58■□□□□ 0.4
COPB1-209ENST00000533096 PIP4K2AP48426 406 aaPredicted RBP17.58■□□□□ 0.4
COPB1-209ENST00000533096 ZNF790Q6PG37 636 aa17.58■□□□□ 0.4
COPB1-209ENST00000533096 WDR90Q96KV7 1748 aa17.58■□□□□ 0.4
COPB1-209ENST00000533096 CLSPNQ9HAW4 1339 aa17.57■□□□□ 0.4
COPB1-209ENST00000533096 KCNQ3O43525 872 aa17.57■□□□□ 0.4
COPB1-209ENST00000533096 POTEIP0CG38 1075 aa17.57■□□□□ 0.4
COPB1-209ENST00000533096 POTEJP0CG39 1038 aa17.57■□□□□ 0.4
COPB1-209ENST00000533096 CHADLQ6NUI6 762 aa17.57■□□□□ 0.4
COPB1-209ENST00000533096 PDZRN3Q9UPQ7 1066 aa17.57■□□□□ 0.4
COPB1-209ENST00000533096 CNBD1Q8NA66 436 aa17.56■□□□□ 0.4
COPB1-209ENST00000533096 CNKSR1Q969H4 720 aa17.56■□□□□ 0.4
COPB1-209ENST00000533096 FMNL2Q96PY5 1086 aa17.56■□□□□ 0.4
COPB1-209ENST00000533096 TAOK3Q9H2K8 898 aa17.56■□□□□ 0.4
COPB1-209ENST00000533096 FAM177BA6PVY3 158 aa17.55■□□□□ 0.4
COPB1-209ENST00000533096 IL6STP40189 918 aaPredicted RBP17.55■□□□□ 0.4
COPB1-209ENST00000533096 ST5P78524 1137 aa17.55■□□□□ 0.4
COPB1-209ENST00000533096 TJP1Q07157 1748 aa17.55■□□□□ 0.4
COPB1-209ENST00000533096 HEG1Q9ULI3 1381 aa17.54■□□□□ 0.4
COPB1-209ENST00000533096 BTBD11A6QL63 1104 aa17.54■□□□□ 0.4
COPB1-209ENST00000533096 PRPF40BQ6NWY9 871 aaKnown RBP17.54■□□□□ 0.4
COPB1-209ENST00000533096 DZIP3Q86Y13 1208 aaKnown RBP17.54■□□□□ 0.4
COPB1-209ENST00000533096 GAS2L2Q8NHY3 880 aa17.54■□□□□ 0.4
COPB1-209ENST00000533096 CLEC11AQ9Y240 323 aa17.54■□□□□ 0.4
COPB1-209ENST00000533096 USP16Q9Y5T5 823 aa17.54■□□□□ 0.4
COPB1-209ENST00000533096 KIF7Q2M1P5 1343 aa17.53■□□□□ 0.4
COPB1-209ENST00000533096 CAMTA2O94983 1202 aa17.53■□□□□ 0.4
COPB1-209ENST00000533096 SRGNP10124 158 aa17.53■□□□□ 0.4
COPB1-209ENST00000533096 EAPPQ56P03 285 aaPredicted RBP17.53■□□□□ 0.4
COPB1-209ENST00000533096 STYK1Q6J9G0 422 aa17.53■□□□□ 0.4
COPB1-209ENST00000533096 NBPF5PQ86XG9 351 aaPredicted RBP17.53■□□□□ 0.4
COPB1-209ENST00000533096 MASTLQ96GX5 879 aa17.53■□□□□ 0.4
COPB1-209ENST00000533096 ARFGEF1Q9Y6D6 1849 aa17.52■□□□□ 0.4
COPB1-209ENST00000533096 PER1O15534 1290 aaPredicted RBP17.52■□□□□ 0.4
COPB1-209ENST00000533096 CREBZFQ9NS37 354 aa17.52■□□□□ 0.4
COPB1-209ENST00000533096 BRCA1P38398 1863 aaKnown RBP17.52■□□□□ 0.39
COPB1-209ENST00000533096 PRAMEF22A3QJZ6 481 aa17.51■□□□□ 0.39
COPB1-209ENST00000533096 PHACTR3Q96KR7 559 aa17.51■□□□□ 0.39
COPB1-209ENST00000533096 ZNF277Q9NRM2 450 aaPredicted RBP17.5■□□□□ 0.39
COPB1-209ENST00000533096 SOGA3Q5TF21 947 aa17.49■□□□□ 0.39
COPB1-209ENST00000533096 OLFM4Q6UX06 510 aa17.49■□□□□ 0.39
COPB1-209ENST00000533096 ADAMTS7Q9UKP4 1686 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms