RNA–Protein interactions for RNA: ENST00000532787.5

CTNND1-233, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-233ENST00000532787 SMARCC1Q92922 1105 aaPredicted RBP8.8□□□□□ -1
CTNND1-233ENST00000532787 NCAPD3P42695 1498 aa8.8□□□□□ -1
CTNND1-233ENST00000532787 LRPPRCP42704 1394 aaKnown RBP8.8□□□□□ -1
CTNND1-233ENST00000532787 MPHOSPH10O00566 681 aaKnown RBP8.8□□□□□ -1
CTNND1-233ENST00000532787 CCDC175P0C221 793 aa8.8□□□□□ -1
CTNND1-233ENST00000532787 NUTM2GQ5VZR2 741 aa8.8□□□□□ -1
CTNND1-233ENST00000532787 CCDC12Q8WUD4 166 aaPredicted RBP8.8□□□□□ -1
CTNND1-233ENST00000532787 HMG20BQ9P0W2 317 aa8.8□□□□□ -1
CTNND1-233ENST00000532787 CKAP4Q07065 602 aaKnown RBP8.79□□□□□ -1
CTNND1-233ENST00000532787 CETN1Q12798 172 aa8.79□□□□□ -1
CTNND1-233ENST00000532787 NBPF1Q3BBV0 1214 aa8.79□□□□□ -1
CTNND1-233ENST00000532787 SSRP1Q08945 709 aaKnown RBP8.79□□□□□ -1
CTNND1-233ENST00000532787 CTCFLQ8NI51 663 aaPredicted RBP8.79□□□□□ -1
CTNND1-233ENST00000532787 STARD3NLO95772 234 aa8.79□□□□□ -1
CTNND1-233ENST00000532787 AMOTQ4VCS5 1084 aa8.79□□□□□ -1
CTNND1-233ENST00000532787 STXBP4Q6ZWJ1 553 aa8.79□□□□□ -1
CTNND1-233ENST00000532787 HOOK3Q86VS8 718 aa8.79□□□□□ -1
CTNND1-233ENST00000532787 ZNF652Q9Y2D9 606 aa8.79□□□□□ -1
CTNND1-233ENST00000532787 IFIT1P09914 478 aaKnown RBP8.79□□□□□ -1
CTNND1-233ENST00000532787 NBPF8Q3BBV2 869 aa8.79□□□□□ -1
CTNND1-233ENST00000532787 RARSP54136 660 aaKnown RBP8.78□□□□□ -1
CTNND1-233ENST00000532787 KLHL40Q2TBA0 621 aa8.78□□□□□ -1
CTNND1-233ENST00000532787 PRPF40BQ6NWY9 871 aaKnown RBP8.78□□□□□ -1
CTNND1-233ENST00000532787 SLF2Q8IX21 1173 aa8.78□□□□□ -1
CTNND1-233ENST00000532787 EVI5LQ96CN4 794 aa8.78□□□□□ -1
CTNND1-233ENST00000532787 ZSCAN16Q9H4T2 348 aaPredicted RBP8.78□□□□□ -1
CTNND1-233ENST00000532787 BMP15O95972 392 aa8.78□□□□□ -1
CTNND1-233ENST00000532787 ANAPC15P60006 121 aa8.78□□□□□ -1
CTNND1-233ENST00000532787 UBE2HP62256 183 aa8.78□□□□□ -1
CTNND1-233ENST00000532787 SPATA24Q86W54 205 aa8.78□□□□□ -1
CTNND1-233ENST00000532787 CNNM3Q8NE01 707 aa8.78□□□□□ -1
CTNND1-233ENST00000532787 NUP88Q99567 741 aaPredicted RBP8.78□□□□□ -1
CTNND1-233ENST00000532787 TMOD2Q9NZR1 351 aa8.78□□□□□ -1
CTNND1-233ENST00000532787 IVLP07476 585 aa8.78□□□□□ -1
CTNND1-233ENST00000532787 CCDC172P0C7W6 258 aa8.78□□□□□ -1
CTNND1-233ENST00000532787 MATR3P43243 847 aaKnown RBP eCLIP8.78□□□□□ -16e-7■■■■□ 22.1
CTNND1-233ENST00000532787 CCDC178Q5BJE1 867 aa8.78□□□□□ -1
CTNND1-233ENST00000532787 BMP2KLQ5H9B9 411 aa8.78□□□□□ -1
CTNND1-233ENST00000532787 C6orf163Q5TEZ5 329 aa8.78□□□□□ -1
CTNND1-233ENST00000532787 IL16Q14005 1332 aa8.78□□□□□ -1
CTNND1-233ENST00000532787 IRX3P78415 501 aaPredicted RBP8.78□□□□□ -1
CTNND1-233ENST00000532787 MAP3K12Q12852 859 aa8.78□□□□□ -1
CTNND1-233ENST00000532787 CAMK4Q16566 473 aa8.78□□□□□ -1
CTNND1-233ENST00000532787 PROSER2Q86WR7 435 aaPredicted RBP8.78□□□□□ -1
CTNND1-233ENST00000532787 IQCA1Q86XH1 822 aa8.78□□□□□ -1
CTNND1-233ENST00000532787 SRRTQ9BXP5 876 aaKnown RBP8.78□□□□□ -1
CTNND1-233ENST00000532787 GTPBP4Q9BZE4 634 aaKnown RBP8.78□□□□□ -1
CTNND1-233ENST00000532787 PRDM10Q9NQV6 1147 aa8.78□□□□□ -1
CTNND1-233ENST00000532787 SNW1Q13573 536 aaKnown RBP8.78□□□□□ -1
CTNND1-233ENST00000532787 CAVIN4Q5BKX8 364 aa8.78□□□□□ -1
CTNND1-233ENST00000532787 TNPO1Q92973 898 aaKnown RBP8.78□□□□□ -1
CTNND1-233ENST00000532787 RMND1Q9NWS8 449 aa8.78□□□□□ -1
CTNND1-233ENST00000532787 BAG4O95429 457 aaKnown RBP8.77□□□□□ -1
CTNND1-233ENST00000532787 TTF1Q15361 905 aaPredicted RBP8.77□□□□□ -1
CTNND1-233ENST00000532787 DUSP27Q5VZP5 1158 aa8.77□□□□□ -1
CTNND1-233ENST00000532787 CTAGE1Q96RT6 745 aa8.77□□□□□ -1
CTNND1-233ENST00000532787 IL1RAPL2Q9NP60 686 aa8.77□□□□□ -1
CTNND1-233ENST00000532787 TTC21AQ8NDW8 1320 aa8.77□□□□□ -1.01
CTNND1-233ENST00000532787 SSR1P43307 286 aaKnown RBP8.77□□□□□ -1.01
CTNND1-233ENST00000532787 CTR9Q6PD62 1173 aa8.77□□□□□ -1.01
CTNND1-233ENST00000532787 TICAM2Q86XR7 235 aa8.77□□□□□ -1.01
CTNND1-233ENST00000532787 NAPBQ9H115 298 aa8.77□□□□□ -1.01
CTNND1-233ENST00000532787 SLC12A7Q9Y666 1083 aa8.77□□□□□ -1.01
CTNND1-233ENST00000532787 GSTTP1A0A1W2PQM5 241 aa8.77□□□□□ -1.01
CTNND1-233ENST00000532787 METTL24Q5JXM2 366 aa8.77□□□□□ -1.01
CTNND1-233ENST00000532787 TOM1L2Q6ZVM7 507 aa8.77□□□□□ -1.01
CTNND1-233ENST00000532787 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.77□□□□□ -1.014e-9■□□□□ 9.9
CTNND1-233ENST00000532787 POGZQ7Z3K3 1410 aa8.77□□□□□ -1.01
CTNND1-233ENST00000532787 FAM177BA6PVY3 158 aa8.77□□□□□ -1.01
CTNND1-233ENST00000532787 IDH1O75874 414 aaKnown RBP8.77□□□□□ -1.01
CTNND1-233ENST00000532787 MYL6BP14649 208 aa8.77□□□□□ -1.01
CTNND1-233ENST00000532787 CUL5Q93034 780 aa8.77□□□□□ -1.01
CTNND1-233ENST00000532787 ZNF213O14771 459 aa8.76□□□□□ -1.01
CTNND1-233ENST00000532787 CBX1P83916 185 aa8.76□□□□□ -1.01
CTNND1-233ENST00000532787 NUTM1Q86Y26 1132 aa8.76□□□□□ -1.01
CTNND1-233ENST00000532787 CEP112Q8N8E3 955 aa8.76□□□□□ -1.01
CTNND1-233ENST00000532787 FSIP1Q8NA03 581 aa8.76□□□□□ -1.01
CTNND1-233ENST00000532787 CALML4Q96GE6 196 aa8.76□□□□□ -1.01
CTNND1-233ENST00000532787 NSRP1Q9H0G5 558 aaKnown RBP8.76□□□□□ -1.01
CTNND1-233ENST00000532787 CYB5RLQ6IPT4 315 aa8.76□□□□□ -1.01
CTNND1-233ENST00000532787 FERMT1Q9BQL6 677 aa8.76□□□□□ -1.01
CTNND1-233ENST00000532787 PLVAPQ9BX97 442 aa8.76□□□□□ -1.01
CTNND1-233ENST00000532787 HYPKQ9NX55 129 aa8.76□□□□□ -1.01
CTNND1-233ENST00000532787 WDR97A6NE52 1622 aa8.76□□□□□ -1.01
CTNND1-233ENST00000532787 IFT140Q96RY7 1462 aa8.76□□□□□ -1.01
CTNND1-233ENST00000532787 STX6O43752 255 aa8.76□□□□□ -1.01
CTNND1-233ENST00000532787 SLC5A1P13866 664 aa8.76□□□□□ -1.01
CTNND1-233ENST00000532787 TAF7Q15545 349 aaPredicted RBP8.76□□□□□ -1.01
CTNND1-233ENST00000532787 CEP135Q66GS9 1140 aa8.76□□□□□ -1.01
CTNND1-233ENST00000532787 CCDC113Q9H0I3 377 aa8.76□□□□□ -1.01
CTNND1-233ENST00000532787 PRXQ9BXM0 1461 aa8.76□□□□□ -1.01
CTNND1-233ENST00000532787 CCDC194A0A1B0GVG4 234 aa8.76□□□□□ -1.01
CTNND1-233ENST00000532787 HSF2BPO75031 334 aa8.76□□□□□ -1.01
CTNND1-233ENST00000532787 KIF5BP33176 963 aa8.76□□□□□ -1.01
CTNND1-233ENST00000532787 RNF187Q5TA31 235 aaPredicted RBP8.76□□□□□ -1.01
CTNND1-233ENST00000532787 TBC1D2Q9BYX2 928 aa8.76□□□□□ -1.01
CTNND1-233ENST00000532787 STMN4Q9H169 189 aaPredicted RBP8.76□□□□□ -1.01
CTNND1-233ENST00000532787 TUBBP07437 444 aa8.75□□□□□ -1.01
CTNND1-233ENST00000532787 SPAG1Q07617 926 aa8.75□□□□□ -1.01
CTNND1-233ENST00000532787 CATIPQ7Z7H3 387 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 258.2 ms