RNA–Protein interactions for RNA: ENST00000532285.1

CAPN1-222, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-222ENST00000532285 MMP10P09238 476 aa30.32■■■□□ 2.44
CAPN1-222ENST00000532285 NLGN2Q8NFZ4 835 aa30.31■■■□□ 2.44
CAPN1-222ENST00000532285 RIPK4P57078 832 aa30.3■■■□□ 2.44
CAPN1-222ENST00000532285 PNISRQ8TF01 805 aaKnown RBP30.3■■■□□ 2.44
CAPN1-222ENST00000532285 SRP68Q9UHB9 627 aaKnown RBP30.3■■■□□ 2.44
CAPN1-222ENST00000532285 ADAMTS8Q9UP79 889 aa30.3■■■□□ 2.44
CAPN1-222ENST00000532285 KDM3BQ7LBC6 1761 aa30.3■■■□□ 2.44
CAPN1-222ENST00000532285 COL15A1P39059 1388 aa30.29■■■□□ 2.44
CAPN1-222ENST00000532285 ZPR1O75312 459 aa30.29■■■□□ 2.44
CAPN1-222ENST00000532285 CANXP27824 592 aaKnown RBP30.29■■■□□ 2.44
CAPN1-222ENST00000532285 TMPOP42166 694 aaKnown RBP30.28■■■□□ 2.44
CAPN1-222ENST00000532285 CCDC146Q8IYE0 955 aa30.28■■■□□ 2.44
CAPN1-222ENST00000532285 RUNDC1Q96C34 613 aa30.28■■■□□ 2.44
CAPN1-222ENST00000532285 SNRPA1P09661 255 aaKnown RBP30.27■■■□□ 2.44
CAPN1-222ENST00000532285 LMOD3Q0VAK6 560 aa30.26■■■□□ 2.43
CAPN1-222ENST00000532285 THUMPD2Q9BTF0 503 aaKnown RBP30.26■■■□□ 2.43
CAPN1-222ENST00000532285 MIS18AQ9NYP9 233 aa30.26■■■□□ 2.43
CAPN1-222ENST00000532285 NARFQ9UHQ1 456 aa30.26■■■□□ 2.43
CAPN1-222ENST00000532285 KIF13BQ9NQT8 1826 aa30.26■■■□□ 2.43
CAPN1-222ENST00000532285 EIF5P55010 431 aaKnown RBP30.25■■■□□ 2.43
CAPN1-222ENST00000532285 PARP3Q9Y6F1 533 aa30.25■■■□□ 2.43
CAPN1-222ENST00000532285 A0A087WZG4 1122 aa30.24■■■□□ 2.43
CAPN1-222ENST00000532285 FKBP8Q14318 412 aa30.24■■■□□ 2.43
CAPN1-222ENST00000532285 GPR162Q16538 588 aa30.24■■■□□ 2.43
CAPN1-222ENST00000532285 USPL1Q5W0Q7 1092 aa30.24■■■□□ 2.43
CAPN1-222ENST00000532285 USP16Q9Y5T5 823 aa30.24■■■□□ 2.43
CAPN1-222ENST00000532285 A1BGP04217 495 aa30.23■■■□□ 2.43
CAPN1-222ENST00000532285 IL6STP40189 918 aaPredicted RBP30.22■■■□□ 2.43
CAPN1-222ENST00000532285 CHD4Q14839 1912 aa30.22■■■□□ 2.43
CAPN1-222ENST00000532285 GOLGB1Q14789 3259 aaKnown RBP30.21■■■□□ 2.43
CAPN1-222ENST00000532285 LAMB4A4D0S4 1761 aa30.2■■■□□ 2.43
CAPN1-222ENST00000532285 UTRNP46939 3433 aa30.2■■■□□ 2.43
CAPN1-222ENST00000532285 PRAMEF22A3QJZ6 481 aa30.2■■■□□ 2.43
CAPN1-222ENST00000532285 ANP32CO43423 234 aa30.2■■■□□ 2.43
CAPN1-222ENST00000532285 NEUROD2Q15784 382 aa30.2■■■□□ 2.43
CAPN1-222ENST00000532285 RRP7AQ9Y3A4 280 aaKnown RBP30.2■■■□□ 2.43
CAPN1-222ENST00000532285 NPM2Q86SE8 214 aaKnown RBP30.19■■■□□ 2.42
CAPN1-222ENST00000532285 PELP1Q8IZL8 1130 aaKnown RBP30.19■■■□□ 2.42
CAPN1-222ENST00000532285 TM4SF1P30408 202 aa30.18■■■□□ 2.42
CAPN1-222ENST00000532285 EIF4A1P60842 406 aaKnown RBP30.17■■■□□ 2.42
CAPN1-222ENST00000532285 BABAM1Q9NWV8 329 aa30.17■■■□□ 2.42
CAPN1-222ENST00000532285 ZNF330Q9Y3S2 320 aaPredicted RBP30.17■■■□□ 2.42
CAPN1-222ENST00000532285 C10orf71Q711Q0 1435 aa30.15■■■□□ 2.42
CAPN1-222ENST00000532285 SCN7AQ01118 1682 aa30.15■■■□□ 2.42
CAPN1-222ENST00000532285 DDR1Q08345 913 aa30.15■■■□□ 2.42
CAPN1-222ENST00000532285 BCL2L12Q9HB09 334 aa30.15■■■□□ 2.42
CAPN1-222ENST00000532285 TSPYL4Q9UJ04 414 aa30.15■■■□□ 2.42
CAPN1-222ENST00000532285 AFDNP55196 1824 aaKnown RBP30.15■■■□□ 2.42
CAPN1-222ENST00000532285 N4BP2Q86UW6 1770 aaPredicted RBP30.14■■■□□ 2.42
CAPN1-222ENST00000532285 GIGYF1O75420 1035 aaPredicted RBP30.14■■■□□ 2.42
CAPN1-222ENST00000532285 TGFB2P61812 414 aa30.14■■■□□ 2.42
CAPN1-222ENST00000532285 TRIM35Q9UPQ4 493 aa30.14■■■□□ 2.42
CAPN1-222ENST00000532285 KIAA1551Q9HCM1 1747 aa30.13■■■□□ 2.41
CAPN1-222ENST00000532285 POLRMTO00411 1230 aaKnown RBP30.13■■■□□ 2.41
CAPN1-222ENST00000532285 YY1P25490 414 aa30.13■■■□□ 2.41
CAPN1-222ENST00000532285 CCDC184Q52MB2 194 aa30.13■■■□□ 2.41
CAPN1-222ENST00000532285 TBC1D2BQ9UPU7 963 aa30.13■■■□□ 2.41
CAPN1-222ENST00000532285 NFIXQ14938 502 aa30.12■■■□□ 2.41
CAPN1-222ENST00000532285 BCORQ6W2J9 1755 aa30.11■■■□□ 2.41
CAPN1-222ENST00000532285 GRIN3BO60391 1043 aa30.11■■■□□ 2.41
CAPN1-222ENST00000532285 YBX3P16989 372 aaKnown RBP eCLIP30.11■■■□□ 2.413e-6■□□□□ 8.1
CAPN1-222ENST00000532285 PIP4K2AP48426 406 aaPredicted RBP30.11■■■□□ 2.41
CAPN1-222ENST00000532285 NRXN2Q9P2S2 1712 aa30.1■■■□□ 2.41
CAPN1-222ENST00000532285 PXDNLA1KZ92 1463 aa30.09■■■□□ 2.41
CAPN1-222ENST00000532285 DZIP3Q86Y13 1208 aaKnown RBP30.09■■■□□ 2.41
CAPN1-222ENST00000532285 NBPF26B4DH59 902 aa30.08■■■□□ 2.41
CAPN1-222ENST00000532285 APAF1O14727 1248 aa30.08■■■□□ 2.41
CAPN1-222ENST00000532285 NBPF10Q6P3W6 841 aaKnown RBP30.08■■■□□ 2.41
CAPN1-222ENST00000532285 NBPF15Q8N660 670 aa30.08■■■□□ 2.41
CAPN1-222ENST00000532285 CAMTA2O94983 1202 aa30.07■■■□□ 2.4
CAPN1-222ENST00000532285 MRS2Q9HD23 443 aa30.06■■■□□ 2.4
CAPN1-222ENST00000532285 BRCA1P38398 1863 aaKnown RBP30.06■■■□□ 2.4
CAPN1-222ENST00000532285 A0A0G2JLW4 131 aa30.05■■■□□ 2.4
CAPN1-222ENST00000532285 CHL1O00533 1208 aa30.05■■■□□ 2.4
CAPN1-222ENST00000532285 SERPINB2P05120 415 aa30.05■■■□□ 2.4
CAPN1-222ENST00000532285 TBC1D9BQ66K14 1250 aa30.04■■■□□ 2.4
CAPN1-222ENST00000532285 BICDL1Q6ZP65 573 aa30.04■■■□□ 2.4
CAPN1-222ENST00000532285 LAS1LQ9Y4W2 734 aaKnown RBP30.03■■■□□ 2.4
CAPN1-222ENST00000532285 DPEP1P16444 411 aa30.02■■■□□ 2.4
CAPN1-222ENST00000532285 CLEC4GQ6UXB4 293 aa30.02■■■□□ 2.4
CAPN1-222ENST00000532285 WWC3Q9ULE0 1092 aa30.01■■■□□ 2.39
CAPN1-222ENST00000532285 ZNF652Q9Y2D9 606 aa30.01■■■□□ 2.39
CAPN1-222ENST00000532285 RGL2O15211 777 aa30■■■□□ 2.39
CAPN1-222ENST00000532285 SETDB2Q96T68 719 aa30■■■□□ 2.39
CAPN1-222ENST00000532285 CARMIL3Q8ND23 1372 aa30■■■□□ 2.39
CAPN1-222ENST00000532285 ERBB4Q15303 1308 aa29.99■■■□□ 2.39
CAPN1-222ENST00000532285 CFAP44Q96MT7 982 aa29.99■■■□□ 2.39
CAPN1-222ENST00000532285 KCNA3P22001 575 aa29.98■■■□□ 2.39
CAPN1-222ENST00000532285 CALD1Q05682 793 aaKnown RBP29.98■■■□□ 2.39
CAPN1-222ENST00000532285 NUP98P52948 1817 aa29.96■■■□□ 2.39
CAPN1-222ENST00000532285 NGEFQ8N5V2 710 aa29.96■■■□□ 2.39
CAPN1-222ENST00000532285 PIM2Q9P1W9 311 aa29.96■■■□□ 2.39
CAPN1-222ENST00000532285 ARFGEF1Q9Y6D6 1849 aa29.96■■■□□ 2.39
CAPN1-222ENST00000532285 MYL6BP14649 208 aa29.95■■■□□ 2.39
CAPN1-222ENST00000532285 EIF2S2P20042 333 aaKnown RBP29.95■■■□□ 2.39
CAPN1-222ENST00000532285 BCS1LQ9Y276 419 aa29.95■■■□□ 2.39
CAPN1-222ENST00000532285 DLEC1Q9Y238 1755 aa29.94■■■□□ 2.38
CAPN1-222ENST00000532285 ANKRD31Q8N7Z5 1873 aa29.93■■■□□ 2.38
CAPN1-222ENST00000532285 ZNF853P0CG23 659 aa29.93■■■□□ 2.38
CAPN1-222ENST00000532285 CHRNA5P30532 468 aa29.93■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms