RNA–Protein interactions for RNA: ENST00000532268.1

SRPRA-207, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 829 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-207ENST00000532268 VSIG10Q8N0Z9 540 aa12.19□□□□□ -0.46
SRPRA-207ENST00000532268 CAMKK2Q96RR4 588 aa12.19□□□□□ -0.46
SRPRA-207ENST00000532268 CHPF2Q9P2E5 772 aa12.19□□□□□ -0.46
SRPRA-207ENST00000532268 CCNL1Q9UK58 526 aaPredicted RBP12.19□□□□□ -0.46
SRPRA-207ENST00000532268 ZNF330Q9Y3S2 320 aaPredicted RBP12.19□□□□□ -0.46
SRPRA-207ENST00000532268 USP16Q9Y5T5 823 aa12.19□□□□□ -0.46
SRPRA-207ENST00000532268 BTAF1O14981 1849 aa12.18□□□□□ -0.46
SRPRA-207ENST00000532268 PLSCR1O15162 318 aa12.18□□□□□ -0.46
SRPRA-207ENST00000532268 PLIN1O60240 522 aa12.18□□□□□ -0.46
SRPRA-207ENST00000532268 MYL6BP14649 208 aa12.18□□□□□ -0.46
SRPRA-207ENST00000532268 RRP1P56182 461 aaKnown RBP12.18□□□□□ -0.46
SRPRA-207ENST00000532268 NPM2Q86SE8 214 aaKnown RBP12.18□□□□□ -0.46
SRPRA-207ENST00000532268 MRPL50Q8N5N7 158 aaKnown RBP12.18□□□□□ -0.46
SRPRA-207ENST00000532268 DBF4Q9UBU7 674 aaPredicted RBP12.18□□□□□ -0.46
SRPRA-207ENST00000532268 KIF16BQ96L93 1317 aa12.17□□□□□ -0.46
SRPRA-207ENST00000532268 IPO8O15397 1037 aaKnown RBP12.17□□□□□ -0.46
SRPRA-207ENST00000532268 ANXA1P04083 346 aa12.17□□□□□ -0.46
SRPRA-207ENST00000532268 PIP4K2AP48426 406 aaPredicted RBP12.17□□□□□ -0.46
SRPRA-207ENST00000532268 KCNQ4P56696 695 aa12.17□□□□□ -0.46
SRPRA-207ENST00000532268 SLC4A9Q96Q91 983 aa12.17□□□□□ -0.46
SRPRA-207ENST00000532268 ARXQ96QS3 562 aa12.17□□□□□ -0.46
SRPRA-207ENST00000532268 NOB1Q9ULX3 412 aaKnown RBP12.17□□□□□ -0.46
SRPRA-207ENST00000532268 C5P01031 1676 aa12.16□□□□□ -0.46
SRPRA-207ENST00000532268 UBR2Q8IWV8 1755 aa12.16□□□□□ -0.46
SRPRA-207ENST00000532268 IRX6P78412 446 aaPredicted RBP12.16□□□□□ -0.46
SRPRA-207ENST00000532268 EZH2Q15910 746 aaKnown RBP12.16□□□□□ -0.46
SRPRA-207ENST00000532268 ZKSCAN2Q63HK3 967 aa12.16□□□□□ -0.46
SRPRA-207ENST00000532268 A1BGP04217 495 aa12.15□□□□□ -0.46
SRPRA-207ENST00000532268 AIMP1Q12904 312 aaKnown RBP12.15□□□□□ -0.46
SRPRA-207ENST00000532268 FKBP5Q13451 457 aaPredicted RBP12.15□□□□□ -0.46
SRPRA-207ENST00000532268 ITPK1Q13572 414 aa12.15□□□□□ -0.46
SRPRA-207ENST00000532268 PROSER3Q2NL68 480 aa12.15□□□□□ -0.46
SRPRA-207ENST00000532268 FTSJ3Q8IY81 847 aaKnown RBP12.15□□□□□ -0.46
SRPRA-207ENST00000532268 HYPKQ9NX55 129 aa12.15□□□□□ -0.46
SRPRA-207ENST00000532268 CYP19A1P11511 503 aaPredicted RBP12.14□□□□□ -0.47
SRPRA-207ENST00000532268 FLIIQ13045 1269 aa12.14□□□□□ -0.47
SRPRA-207ENST00000532268 G2E3Q7L622 706 aa12.14□□□□□ -0.47
SRPRA-207ENST00000532268 CLUAP1Q96AJ1 413 aa12.14□□□□□ -0.47
SRPRA-207ENST00000532268 PHAXQ9H814 394 aaKnown RBP12.14□□□□□ -0.47
SRPRA-207ENST00000532268 DDX21Q9NR30 783 aaKnown RBP eCLIP12.14□□□□□ -0.47
SRPRA-207ENST00000532268 CCDC87Q9NVE4 849 aa12.14□□□□□ -0.47
SRPRA-207ENST00000532268 ERBB4Q15303 1308 aa12.13□□□□□ -0.47
SRPRA-207ENST00000532268 LAMB4A4D0S4 1761 aa12.13□□□□□ -0.47
SRPRA-207ENST00000532268 DDX58O95786 925 aaKnown RBP12.13□□□□□ -0.47
SRPRA-207ENST00000532268 MS4A1P11836 297 aa12.13□□□□□ -0.47
SRPRA-207ENST00000532268 CRKLP46109 303 aaKnown RBP12.13□□□□□ -0.47
SRPRA-207ENST00000532268 ATF7IPQ6VMQ6 1270 aa12.13□□□□□ -0.47
SRPRA-207ENST00000532268 LINC00116Q8NCU8 138 aa12.13□□□□□ -0.47
SRPRA-207ENST00000532268 XAGE3Q8WTP9 111 aa12.13□□□□□ -0.47
SRPRA-207ENST00000532268 API5Q9BZZ5 524 aaKnown RBP12.13□□□□□ -0.47
SRPRA-207ENST00000532268 NBPF26B4DH59 902 aa12.12□□□□□ -0.47
SRPRA-207ENST00000532268 BRPF1P55201 1214 aaPredicted RBP12.12□□□□□ -0.47
SRPRA-207ENST00000532268 TXNRD1Q16881 649 aa12.12□□□□□ -0.47
SRPRA-207ENST00000532268 SLC27A3Q5K4L6 730 aa12.12□□□□□ -0.47
SRPRA-207ENST00000532268 NBPF14Q5TI25 921 aa12.12□□□□□ -0.47
SRPRA-207ENST00000532268 NBPF10Q6P3W6 841 aaKnown RBP12.12□□□□□ -0.47
SRPRA-207ENST00000532268 SLC4A10Q6U841 1118 aa12.12□□□□□ -0.47
SRPRA-207ENST00000532268 COPS6Q7L5N1 327 aa12.12□□□□□ -0.47
SRPRA-207ENST00000532268 DZIP1LQ8IYY4 767 aaKnown RBP12.12□□□□□ -0.47
SRPRA-207ENST00000532268 NBPF15Q8N660 670 aa12.12□□□□□ -0.47
SRPRA-207ENST00000532268 AK7Q96M32 723 aa12.12□□□□□ -0.47
SRPRA-207ENST00000532268 ZBTB1Q9Y2K1 713 aa12.12□□□□□ -0.47
SRPRA-207ENST00000532268 RGPD3A6NKT7 1758 aaPredicted RBP12.12□□□□□ -0.47
SRPRA-207ENST00000532268 RGPD4Q7Z3J3 1758 aa12.12□□□□□ -0.47
SRPRA-207ENST00000532268 PTPRCP08575 1304 aa12.11□□□□□ -0.47
SRPRA-207ENST00000532268 TRIM27P14373 513 aa12.11□□□□□ -0.47
SRPRA-207ENST00000532268 HMGB2P26583 209 aaKnown RBP12.11□□□□□ -0.47
SRPRA-207ENST00000532268 PDIA6Q15084 440 aa12.11□□□□□ -0.47
SRPRA-207ENST00000532268 KIF6Q6ZMV9 814 aa12.11□□□□□ -0.47
SRPRA-207ENST00000532268 PROM2Q8N271 834 aa12.11□□□□□ -0.47
SRPRA-207ENST00000532268 PANK1Q8TE04 598 aa12.11□□□□□ -0.47
SRPRA-207ENST00000532268 TNNQ9UQP3 1299 aa12.11□□□□□ -0.47
SRPRA-207ENST00000532268 TJP1Q07157 1748 aa12.11□□□□□ -0.47
SRPRA-207ENST00000532268 RREB1Q92766 1687 aa12.1□□□□□ -0.47
SRPRA-207ENST00000532268 F6X3S4 739 aa12.1□□□□□ -0.47
SRPRA-207ENST00000532268 GNPATO15228 680 aa12.1□□□□□ -0.47
SRPRA-207ENST00000532268 FKBP8Q14318 412 aa12.1□□□□□ -0.47
SRPRA-207ENST00000532268 C20orf194Q5TEA3 1177 aa12.1□□□□□ -0.47
SRPRA-207ENST00000532268 RIC3Q7Z5B4 369 aa12.1□□□□□ -0.47
SRPRA-207ENST00000532268 ARHGAP45Q92619 1136 aa12.1□□□□□ -0.47
SRPRA-207ENST00000532268 LRRC4BQ9NT99 713 aa12.1□□□□□ -0.47
SRPRA-207ENST00000532268 IL6STP40189 918 aaPredicted RBP12.09□□□□□ -0.47
SRPRA-207ENST00000532268 PDE3AQ14432 1141 aa12.09□□□□□ -0.47
SRPRA-207ENST00000532268 INTS5Q6P9B9 1019 aaKnown RBP12.09□□□□□ -0.47
SRPRA-207ENST00000532268 ANKRD13DQ6ZTN6 518 aa12.09□□□□□ -0.47
SRPRA-207ENST00000532268 ITPRIPQ8IWB1 547 aa12.09□□□□□ -0.47
SRPRA-207ENST00000532268 RTCBQ9Y3I0 505 aaKnown RBP12.09□□□□□ -0.47
SRPRA-207ENST00000532268 RNF123Q5XPI4 1314 aa12.09□□□□□ -0.47
SRPRA-207ENST00000532268 CNTNAP4Q9C0A0 1308 aa12.09□□□□□ -0.47
SRPRA-207ENST00000532268 LY75O60449 1722 aa12.08□□□□□ -0.47
SRPRA-207ENST00000532268 PI4KAP2A4QPH2 592 aa12.08□□□□□ -0.48
SRPRA-207ENST00000532268 PHF14O94880 888 aa12.08□□□□□ -0.48
SRPRA-207ENST00000532268 RC3H1Q5TC82 1133 aaKnown RBP12.08□□□□□ -0.48
SRPRA-207ENST00000532268 KSR2Q6VAB6 950 aa12.08□□□□□ -0.48
SRPRA-207ENST00000532268 TTLL7Q6ZT98 887 aa12.08□□□□□ -0.48
SRPRA-207ENST00000532268 DZIP3Q86Y13 1208 aaKnown RBP12.08□□□□□ -0.48
SRPRA-207ENST00000532268 PI4KAP1Q8N8J0 262 aa12.08□□□□□ -0.48
SRPRA-207ENST00000532268 ZBTB3Q9H5J0 574 aa12.08□□□□□ -0.48
SRPRA-207ENST00000532268 MAP3K2Q9Y2U5 619 aa12.08□□□□□ -0.48
SRPRA-207ENST00000532268 COG6Q9Y2V7 657 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 352.6 ms