RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 DCAF5Q96JK2 942 aa5.09□□□□□ -1.59
CD44-234ENST00000531873 TMEM229AB2RXF0 380 aa5.08□□□□□ -1.6
CD44-234ENST00000531873 M0R2N6 131 aa5.08□□□□□ -1.6
CD44-234ENST00000531873 ADAMTS2O95450 1211 aa5.08□□□□□ -1.6
CD44-234ENST00000531873 WEE1P30291 646 aa5.08□□□□□ -1.6
CD44-234ENST00000531873 RAB15P59190 212 aa5.08□□□□□ -1.6
CD44-234ENST00000531873 ERVK-9P63128 1117 aa5.08□□□□□ -1.6
CD44-234ENST00000531873 SRSF11Q05519 484 aaKnown RBP5.08□□□□□ -1.6
CD44-234ENST00000531873 PSME1Q06323 249 aa5.08□□□□□ -1.6
CD44-234ENST00000531873 TSEN2Q8NCE0 465 aaKnown RBP5.08□□□□□ -1.6
CD44-234ENST00000531873 SIRT1Q96EB6 747 aa5.08□□□□□ -1.6
CD44-234ENST00000531873 EMILIN1Q9Y6C2 1016 aa5.08□□□□□ -1.6
CD44-234ENST00000531873 UNCXA6NJT0 531 aa5.07□□□□□ -1.6
CD44-234ENST00000531873 PHF20L1A8MW92 1017 aa5.07□□□□□ -1.6
CD44-234ENST00000531873 SPINT1O43278 529 aa5.07□□□□□ -1.6
CD44-234ENST00000531873 STAU1O95793 577 aaKnown RBP5.07□□□□□ -1.6
CD44-234ENST00000531873 SCNN1DP51172 638 aa5.07□□□□□ -1.6
CD44-234ENST00000531873 ZNF211Q13398 564 aaPredicted RBP5.07□□□□□ -1.6
CD44-234ENST00000531873 FKBP5Q13451 457 aaPredicted RBP5.07□□□□□ -1.6
CD44-234ENST00000531873 CAPN12Q6ZSI9 719 aa5.07□□□□□ -1.6
CD44-234ENST00000531873 CCDC125Q86Z20 511 aa5.07□□□□□ -1.6
CD44-234ENST00000531873 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.07□□□□□ -1.6
CD44-234ENST00000531873 OSBPL3Q9H4L5 887 aa5.07□□□□□ -1.6
CD44-234ENST00000531873 ZNF358Q9NW07 568 aa5.07□□□□□ -1.6
CD44-234ENST00000531873 EGFL7Q9UHF1 273 aa5.07□□□□□ -1.6
CD44-234ENST00000531873 FIGNL2A6NMB9 653 aa5.06□□□□□ -1.6
CD44-234ENST00000531873 K7ELQ4 463 aaPredicted RBP5.06□□□□□ -1.6
CD44-234ENST00000531873 CELA2BP08218 269 aaPredicted RBP5.06□□□□□ -1.6
CD44-234ENST00000531873 FSHRP23945 695 aa5.06□□□□□ -1.6
CD44-234ENST00000531873 MAP3K10Q02779 954 aa5.06□□□□□ -1.6
CD44-234ENST00000531873 ECM1Q16610 540 aa5.06□□□□□ -1.6
CD44-234ENST00000531873 Q6ZVU0 165 aa5.06□□□□□ -1.6
CD44-234ENST00000531873 VASH1Q7L8A9 365 aaPredicted RBP5.06□□□□□ -1.6
CD44-234ENST00000531873 Q8N3U1 123 aa5.06□□□□□ -1.6
CD44-234ENST00000531873 GAS2L2Q8NHY3 880 aa5.06□□□□□ -1.6
CD44-234ENST00000531873 MKNK1Q9BUB5 465 aa5.06□□□□□ -1.6
CD44-234ENST00000531873 ENAMQ9NRM1 1142 aa5.06□□□□□ -1.6
CD44-234ENST00000531873 SEPT3Q9UH03 358 aa5.06□□□□□ -1.6
CD44-234ENST00000531873 RBM47A0AV96 593 aaKnown RBP5.05□□□□□ -1.6
CD44-234ENST00000531873 H3BRB1 525 aa5.05□□□□□ -1.6
CD44-234ENST00000531873 ICMTO60725 284 aa5.05□□□□□ -1.6
CD44-234ENST00000531873 MYCP01106 439 aaPredicted RBP5.05□□□□□ -1.6
CD44-234ENST00000531873 EPHA4P54764 986 aa5.05□□□□□ -1.6
CD44-234ENST00000531873 CC2D2BQ6DHV5 1058 aa5.05□□□□□ -1.6
CD44-234ENST00000531873 NPAS4Q8IUM7 802 aa5.05□□□□□ -1.6
CD44-234ENST00000531873 HINFPQ9BQA5 517 aa5.05□□□□□ -1.6
CD44-234ENST00000531873 TUT1Q9H6E5 874 aaKnown RBP5.05□□□□□ -1.6
CD44-234ENST00000531873 ANO2Q9NQ90 1003 aa5.05□□□□□ -1.6
CD44-234ENST00000531873 TMPRSS4Q9NRS4 437 aa5.05□□□□□ -1.6
CD44-234ENST00000531873 RBM19Q9Y4C8 960 aaKnown RBP5.05□□□□□ -1.6
CD44-234ENST00000531873 CDC14CA4D256 554 aa5.04□□□□□ -1.6
CD44-234ENST00000531873 WASLO00401 505 aaPredicted RBP5.04□□□□□ -1.6
CD44-234ENST00000531873 C21orf2O43822 256 aa5.04□□□□□ -1.6
CD44-234ENST00000531873 ABL1P00519 1130 aa5.04□□□□□ -1.6
CD44-234ENST00000531873 MTMR3Q13615 1198 aa5.04□□□□□ -1.6
CD44-234ENST00000531873 CCDC116Q8IYX3 515 aa5.04□□□□□ -1.6
CD44-234ENST00000531873 BEND7Q8N7W2 519 aaPredicted RBP5.04□□□□□ -1.6
CD44-234ENST00000531873 ZNF784Q8NCA9 323 aaPredicted RBP5.04□□□□□ -1.6
CD44-234ENST00000531873 CYLDQ9NQC7 956 aa5.04□□□□□ -1.6
CD44-234ENST00000531873 CNTNAP5Q8WYK1 1306 aa5.03□□□□□ -1.6
CD44-234ENST00000531873 E9PSI1 815 aa5.03□□□□□ -1.6
CD44-234ENST00000531873 LILRA1O75019 489 aa5.03□□□□□ -1.6
CD44-234ENST00000531873 ERCC3P19447 782 aa5.03□□□□□ -1.6
CD44-234ENST00000531873 IGFBP4P22692 258 aa5.03□□□□□ -1.6
CD44-234ENST00000531873 GDF10P55107 478 aa5.03□□□□□ -1.6
CD44-234ENST00000531873 GAS6Q14393 721 aa5.03□□□□□ -1.6
CD44-234ENST00000531873 KRTAP1-3Q8IUG1 177 aa5.03□□□□□ -1.6
CD44-234ENST00000531873 GTF3C2Q8WUA4 911 aaPredicted RBP5.03□□□□□ -1.6
CD44-234ENST00000531873 ETNK1Q9HBU6 452 aa5.03□□□□□ -1.6
CD44-234ENST00000531873 BIN2Q9UBW5 565 aaPredicted RBP5.03□□□□□ -1.6
CD44-234ENST00000531873 SENP3-EIF4A1A0A087X0R7 540 aa5.02□□□□□ -1.61
CD44-234ENST00000531873 FOXO3O43524 673 aa5.02□□□□□ -1.61
CD44-234ENST00000531873 INHAP05111 366 aa5.02□□□□□ -1.61
CD44-234ENST00000531873 ARHGAP4P98171 946 aa5.02□□□□□ -1.61
CD44-234ENST00000531873 GLYCTKQ8IVS8 523 aa5.02□□□□□ -1.61
CD44-234ENST00000531873 TNS4Q8IZW8 715 aa5.02□□□□□ -1.61
CD44-234ENST00000531873 GALNT6Q8NCL4 622 aa5.02□□□□□ -1.61
CD44-234ENST00000531873 COL26A1Q96A83 441 aa5.02□□□□□ -1.61
CD44-234ENST00000531873 KIAA1522Q9P206 1035 aaPredicted RBP5.02□□□□□ -1.61
CD44-234ENST00000531873 ANKRD33BA6NCL7 494 aa5.01□□□□□ -1.61
CD44-234ENST00000531873 ZNF16P17020 682 aaPredicted RBP5.01□□□□□ -1.61
CD44-234ENST00000531873 PPP1R26Q5T8A7 1209 aaPredicted RBP5.01□□□□□ -1.61
CD44-234ENST00000531873 HELQQ8TDG4 1101 aa5.01□□□□□ -1.61
CD44-234ENST00000531873 TSPAN10Q9H1Z9 355 aaPredicted RBP5.01□□□□□ -1.61
CD44-234ENST00000531873 IGSF5Q9NSI5 407 aa5.01□□□□□ -1.61
CD44-234ENST00000531873 LRRC4BQ9NT99 713 aa5.01□□□□□ -1.61
CD44-234ENST00000531873 PGPEP1Q9NXJ5 209 aa5.01□□□□□ -1.61
CD44-234ENST00000531873 PTCD1O75127 700 aaKnown RBP5□□□□□ -1.61
CD44-234ENST00000531873 ADD1P35611 737 aaKnown RBP5□□□□□ -1.61
CD44-234ENST00000531873 BAG6P46379 1132 aa5□□□□□ -1.61
CD44-234ENST00000531873 FKBP4Q02790 459 aaKnown RBP eCLIP5□□□□□ -1.61
CD44-234ENST00000531873 DHX9Q08211 1270 aaKnown RBP5□□□□□ -1.61
CD44-234ENST00000531873 CBLBQ13191 982 aa5□□□□□ -1.61
CD44-234ENST00000531873 SF3B2Q13435 895 aaKnown RBP5□□□□□ -1.61
CD44-234ENST00000531873 MTFR1Q15390 333 aa5□□□□□ -1.61
CD44-234ENST00000531873 PODNQ7Z5L7 613 aa5□□□□□ -1.61
CD44-234ENST00000531873 SCG3Q8WXD2 468 aaKnown RBP5□□□□□ -1.61
CD44-234ENST00000531873 SLC4A9Q96Q91 983 aa5□□□□□ -1.61
CD44-234ENST00000531873 SERTAD1Q9UHV2 236 aa5□□□□□ -1.61
CD44-234ENST00000531873 A0A1W2PRU2 124 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms