RNA–Protein interactions for RNA: ENST00000530746.1

PPFIA1-216, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-216ENST00000530746 THUMPD2Q9BTF0 503 aaKnown RBP19.69■□□□□ 0.74
PPFIA1-216ENST00000530746 ZBTB1Q9Y2K1 713 aa19.69■□□□□ 0.74
PPFIA1-216ENST00000530746 SOS1Q07889 1333 aaPredicted RBP19.69■□□□□ 0.74
PPFIA1-216ENST00000530746 LMOD3Q0VAK6 560 aa19.68■□□□□ 0.74
PPFIA1-216ENST00000530746 NLGN1Q8N2Q7 840 aa19.68■□□□□ 0.74
PPFIA1-216ENST00000530746 PNISRQ8TF01 805 aaKnown RBP19.68■□□□□ 0.74
PPFIA1-216ENST00000530746 GYS1P13807 737 aa19.67■□□□□ 0.74
PPFIA1-216ENST00000530746 MIS18AQ9NYP9 233 aa19.67■□□□□ 0.74
PPFIA1-216ENST00000530746 RRP7AQ9Y3A4 280 aaKnown RBP19.67■□□□□ 0.74
PPFIA1-216ENST00000530746 USP42Q9H9J4 1324 aaKnown RBP19.67■□□□□ 0.74
PPFIA1-216ENST00000530746 COL15A1P39059 1388 aa19.67■□□□□ 0.74
PPFIA1-216ENST00000530746 SNRPA1P09661 255 aaKnown RBP19.66■□□□□ 0.74
PPFIA1-216ENST00000530746 CANXP27824 592 aaKnown RBP19.66■□□□□ 0.74
PPFIA1-216ENST00000530746 CCDC184Q52MB2 194 aa19.66■□□□□ 0.74
PPFIA1-216ENST00000530746 DCAF8L1A6NGE4 600 aa19.65■□□□□ 0.74
PPFIA1-216ENST00000530746 MMP10P09238 476 aa19.65■□□□□ 0.74
PPFIA1-216ENST00000530746 NEUROD2Q15784 382 aa19.65■□□□□ 0.74
PPFIA1-216ENST00000530746 SRP68Q9UHB9 627 aaKnown RBP19.65■□□□□ 0.74
PPFIA1-216ENST00000530746 LAMB4A4D0S4 1761 aa19.65■□□□□ 0.74
PPFIA1-216ENST00000530746 ZPR1O75312 459 aa19.64■□□□□ 0.73
PPFIA1-216ENST00000530746 USP16Q9Y5T5 823 aa19.64■□□□□ 0.73
PPFIA1-216ENST00000530746 PRAMEF22A3QJZ6 481 aa19.63■□□□□ 0.73
PPFIA1-216ENST00000530746 EIF5P55010 431 aaKnown RBP19.63■□□□□ 0.73
PPFIA1-216ENST00000530746 NARFQ9UHQ1 456 aa19.63■□□□□ 0.73
PPFIA1-216ENST00000530746 CD2APQ9Y5K6 639 aa19.63■□□□□ 0.73
PPFIA1-216ENST00000530746 GOLGB1Q14789 3259 aaKnown RBP19.63■□□□□ 0.73
PPFIA1-216ENST00000530746 IL6STP40189 918 aaPredicted RBP19.62■□□□□ 0.73
PPFIA1-216ENST00000530746 NLGN2Q8NFZ4 835 aa19.62■□□□□ 0.73
PPFIA1-216ENST00000530746 TRIM35Q9UPQ4 493 aa19.62■□□□□ 0.73
PPFIA1-216ENST00000530746 UTRNP46939 3433 aa19.62■□□□□ 0.73
PPFIA1-216ENST00000530746 KIF13BQ9NQT8 1826 aa19.62■□□□□ 0.73
PPFIA1-216ENST00000530746 A1BGP04217 495 aa19.61■□□□□ 0.73
PPFIA1-216ENST00000530746 EIF4A1P60842 406 aaKnown RBP19.61■□□□□ 0.73
PPFIA1-216ENST00000530746 FKBP8Q14318 412 aa19.61■□□□□ 0.73
PPFIA1-216ENST00000530746 USPL1Q5W0Q7 1092 aa19.61■□□□□ 0.73
PPFIA1-216ENST00000530746 BABAM1Q9NWV8 329 aa19.61■□□□□ 0.73
PPFIA1-216ENST00000530746 A0A087WZG4 1122 aa19.6■□□□□ 0.73
PPFIA1-216ENST00000530746 MRS2Q9HD23 443 aa19.6■□□□□ 0.73
PPFIA1-216ENST00000530746 TSPYL4Q9UJ04 414 aa19.6■□□□□ 0.73
PPFIA1-216ENST00000530746 SCN7AQ01118 1682 aa19.59■□□□□ 0.73
PPFIA1-216ENST00000530746 APAF1O14727 1248 aa19.59■□□□□ 0.73
PPFIA1-216ENST00000530746 GIGYF1O75420 1035 aaPredicted RBP19.59■□□□□ 0.73
PPFIA1-216ENST00000530746 ZNF330Q9Y3S2 320 aaPredicted RBP19.59■□□□□ 0.73
PPFIA1-216ENST00000530746 PARP3Q9Y6F1 533 aa19.59■□□□□ 0.73
PPFIA1-216ENST00000530746 NPM2Q86SE8 214 aaKnown RBP19.58■□□□□ 0.72
PPFIA1-216ENST00000530746 BCL2L12Q9HB09 334 aa19.57■□□□□ 0.72
PPFIA1-216ENST00000530746 AFDNP55196 1824 aaKnown RBP19.57■□□□□ 0.72
PPFIA1-216ENST00000530746 BCORQ6W2J9 1755 aa19.57■□□□□ 0.72
PPFIA1-216ENST00000530746 TM4SF1P30408 202 aa19.56■□□□□ 0.72
PPFIA1-216ENST00000530746 PIP4K2AP48426 406 aaPredicted RBP19.56■□□□□ 0.72
PPFIA1-216ENST00000530746 DDR1Q08345 913 aa19.56■□□□□ 0.72
PPFIA1-216ENST00000530746 TBC1D2BQ9UPU7 963 aa19.56■□□□□ 0.72
PPFIA1-216ENST00000530746 NBPF26B4DH59 902 aa19.55■□□□□ 0.72
PPFIA1-216ENST00000530746 NBPF10Q6P3W6 841 aaKnown RBP19.55■□□□□ 0.72
PPFIA1-216ENST00000530746 C10orf71Q711Q0 1435 aa19.55■□□□□ 0.72
PPFIA1-216ENST00000530746 NBPF15Q8N660 670 aa19.55■□□□□ 0.72
PPFIA1-216ENST00000530746 KIAA1551Q9HCM1 1747 aa19.55■□□□□ 0.72
PPFIA1-216ENST00000530746 POLRMTO00411 1230 aaKnown RBP19.54■□□□□ 0.72
PPFIA1-216ENST00000530746 CHL1O00533 1208 aa19.54■□□□□ 0.72
PPFIA1-216ENST00000530746 NFIXQ14938 502 aa19.54■□□□□ 0.72
PPFIA1-216ENST00000530746 GPR162Q16538 588 aa19.54■□□□□ 0.72
PPFIA1-216ENST00000530746 CHD4Q14839 1912 aa19.54■□□□□ 0.72
PPFIA1-216ENST00000530746 N4BP2Q86UW6 1770 aaPredicted RBP19.54■□□□□ 0.72
PPFIA1-216ENST00000530746 NRXN2Q9P2S2 1712 aa19.54■□□□□ 0.72
PPFIA1-216ENST00000530746 DZIP3Q86Y13 1208 aaKnown RBP19.53■□□□□ 0.72
PPFIA1-216ENST00000530746 LAS1LQ9Y4W2 734 aaKnown RBP19.53■□□□□ 0.72
PPFIA1-216ENST00000530746 CAMTA2O94983 1202 aa19.52■□□□□ 0.72
PPFIA1-216ENST00000530746 PELP1Q8IZL8 1130 aaKnown RBP19.52■□□□□ 0.72
PPFIA1-216ENST00000530746 TGFB2P61812 414 aa19.51■□□□□ 0.71
PPFIA1-216ENST00000530746 CFAP44Q96MT7 982 aa19.51■□□□□ 0.71
PPFIA1-216ENST00000530746 PXDNLA1KZ92 1463 aa19.5■□□□□ 0.71
PPFIA1-216ENST00000530746 CALD1Q05682 793 aaKnown RBP19.5■□□□□ 0.71
PPFIA1-216ENST00000530746 BRCA1P38398 1863 aaKnown RBP19.5■□□□□ 0.71
PPFIA1-216ENST00000530746 YBX3P16989 372 aaKnown RBP eCLIP19.49■□□□□ 0.71
PPFIA1-216ENST00000530746 TBC1D9BQ66K14 1250 aa19.49■□□□□ 0.71
PPFIA1-216ENST00000530746 BICDL1Q6ZP65 573 aa19.49■□□□□ 0.71
PPFIA1-216ENST00000530746 ERBB4Q15303 1308 aa19.49■□□□□ 0.71
PPFIA1-216ENST00000530746 SERPINB2P05120 415 aa19.48■□□□□ 0.71
PPFIA1-216ENST00000530746 CLEC4GQ6UXB4 293 aa19.48■□□□□ 0.71
PPFIA1-216ENST00000530746 NUP98P52948 1817 aa19.48■□□□□ 0.71
PPFIA1-216ENST00000530746 ZNF853P0CG23 659 aa19.47■□□□□ 0.71
PPFIA1-216ENST00000530746 CCDC27Q2M243 656 aa19.47■□□□□ 0.71
PPFIA1-216ENST00000530746 MBIPQ9NS73 344 aa19.47■□□□□ 0.71
PPFIA1-216ENST00000530746 IFT57Q9NWB7 429 aa19.47■□□□□ 0.71
PPFIA1-216ENST00000530746 CARMIL3Q8ND23 1372 aa19.46■□□□□ 0.71
PPFIA1-216ENST00000530746 A0A0G2JLW4 131 aa19.46■□□□□ 0.71
PPFIA1-216ENST00000530746 RGL2O15211 777 aa19.46■□□□□ 0.71
PPFIA1-216ENST00000530746 GRIN3BO60391 1043 aa19.46■□□□□ 0.71
PPFIA1-216ENST00000530746 MYL6BP14649 208 aa19.46■□□□□ 0.71
PPFIA1-216ENST00000530746 EIF2S2P20042 333 aaKnown RBP19.46■□□□□ 0.71
PPFIA1-216ENST00000530746 GNAI1P63096 354 aa19.46■□□□□ 0.71
PPFIA1-216ENST00000530746 KRT24Q2M2I5 525 aa19.46■□□□□ 0.71
PPFIA1-216ENST00000530746 NCBP3Q53F19 620 aaKnown RBP19.46■□□□□ 0.71
PPFIA1-216ENST00000530746 NGEFQ8N5V2 710 aa19.46■□□□□ 0.71
PPFIA1-216ENST00000530746 ZNF652Q9Y2D9 606 aa19.46■□□□□ 0.71
PPFIA1-216ENST00000530746 DPEP1P16444 411 aa19.45■□□□□ 0.7
PPFIA1-216ENST00000530746 SETDB2Q96T68 719 aa19.45■□□□□ 0.7
PPFIA1-216ENST00000530746 WWC3Q9ULE0 1092 aa19.45■□□□□ 0.7
PPFIA1-216ENST00000530746 SENP3-EIF4A1A0A087X0R7 540 aa19.44■□□□□ 0.7
PPFIA1-216ENST00000530746 PDIA6Q15084 440 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms