RNA–Protein interactions for RNA: ENST00000530721.5

RPS3-216, Transcript of ribosomal protein S3, humanhuman

TSL 3

Gene RPS3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-216ENST00000530721 ADCY9O60503 1353 aa17.15■□□□□ 0.34
RPS3-216ENST00000530721 CEMIPQ8WUJ3 1361 aa17.15■□□□□ 0.34
RPS3-216ENST00000530721 STARD3NLO95772 234 aa17.14■□□□□ 0.33
RPS3-216ENST00000530721 DPEP1P16444 411 aa17.14■□□□□ 0.33
RPS3-216ENST00000530721 DDR1Q08345 913 aa17.14■□□□□ 0.33
RPS3-216ENST00000530721 NARFQ9UHQ1 456 aa17.14■□□□□ 0.33
RPS3-216ENST00000530721 SIPA1L3O60292 1781 aaPredicted RBP17.14■□□□□ 0.33
RPS3-216ENST00000530721 FCHSD2O94868 740 aa17.13■□□□□ 0.33
RPS3-216ENST00000530721 TM4SF1P30408 202 aa17.13■□□□□ 0.33
RPS3-216ENST00000530721 ZNF496Q96IT1 587 aaPredicted RBP17.13■□□□□ 0.33
RPS3-216ENST00000530721 BCS1LQ9Y276 419 aa17.13■□□□□ 0.33
RPS3-216ENST00000530721 HEG1Q9ULI3 1381 aa17.13■□□□□ 0.33
RPS3-216ENST00000530721 POLRMTO00411 1230 aaKnown RBP17.12■□□□□ 0.33
RPS3-216ENST00000530721 TEX13AQ9BXU3 409 aaPredicted RBP17.12■□□□□ 0.33
RPS3-216ENST00000530721 CANXP27824 592 aaKnown RBP17.11■□□□□ 0.33
RPS3-216ENST00000530721 FMNL2Q96PY5 1086 aa17.11■□□□□ 0.33
RPS3-216ENST00000530721 BRCA1P38398 1863 aaKnown RBP17.11■□□□□ 0.33
RPS3-216ENST00000530721 BTBD11A6QL63 1104 aa17.1■□□□□ 0.33
RPS3-216ENST00000530721 KCNA3P22001 575 aa17.1■□□□□ 0.33
RPS3-216ENST00000530721 GPBP1L1Q9HC44 474 aaPredicted RBP17.1■□□□□ 0.33
RPS3-216ENST00000530721 A0A087WZG4 1122 aa17.09■□□□□ 0.33
RPS3-216ENST00000530721 EIF5P55010 431 aaKnown RBP17.09■□□□□ 0.33
RPS3-216ENST00000530721 NFIXQ14938 502 aa17.09■□□□□ 0.33
RPS3-216ENST00000530721 RTF1Q92541 710 aaKnown RBP17.09■□□□□ 0.33
RPS3-216ENST00000530721 BCL2L12Q9HB09 334 aa17.09■□□□□ 0.33
RPS3-216ENST00000530721 PIM2Q9P1W9 311 aa17.09■□□□□ 0.33
RPS3-216ENST00000530721 SENP3-EIF4A1A0A087X0R7 540 aa17.07■□□□□ 0.32
RPS3-216ENST00000530721 ARHGAP27Q6ZUM4 889 aa17.07■□□□□ 0.32
RPS3-216ENST00000530721 MCM10Q7L590 875 aa17.07■□□□□ 0.32
RPS3-216ENST00000530721 ARFGEF1Q9Y6D6 1849 aa17.07■□□□□ 0.32
RPS3-216ENST00000530721 KCNQ3O43525 872 aa17.06■□□□□ 0.32
RPS3-216ENST00000530721 HTATSF1O43719 755 aaKnown RBP17.06■□□□□ 0.32
RPS3-216ENST00000530721 IL6STP40189 918 aaPredicted RBP17.06■□□□□ 0.32
RPS3-216ENST00000530721 DALRD3Q5D0E6 543 aaKnown RBP17.06■□□□□ 0.32
RPS3-216ENST00000530721 ZNF526Q8TF50 670 aaPredicted RBP17.06■□□□□ 0.32
RPS3-216ENST00000530721 NRXN2Q9P2S2 1712 aa17.06■□□□□ 0.32
RPS3-216ENST00000530721 AFDNP55196 1824 aaKnown RBP17.05■□□□□ 0.32
RPS3-216ENST00000530721 SERPINB2P05120 415 aa17.05■□□□□ 0.32
RPS3-216ENST00000530721 NEFMP07197 916 aa17.05■□□□□ 0.32
RPS3-216ENST00000530721 CHRNA5P30532 468 aa17.05■□□□□ 0.32
RPS3-216ENST00000530721 NPM2Q86SE8 214 aaKnown RBP17.05■□□□□ 0.32
RPS3-216ENST00000530721 ZNF330Q9Y3S2 320 aaPredicted RBP17.05■□□□□ 0.32
RPS3-216ENST00000530721 A1BGP04217 495 aa17.03■□□□□ 0.32
RPS3-216ENST00000530721 DCTN1Q14203 1278 aa17.03■□□□□ 0.32
RPS3-216ENST00000530721 BICDL1Q6ZP65 573 aa17.03■□□□□ 0.32
RPS3-216ENST00000530721 TBC1D2BQ9UPU7 963 aa17.03■□□□□ 0.32
RPS3-216ENST00000530721 SCN7AQ01118 1682 aa17.03■□□□□ 0.32
RPS3-216ENST00000530721 SNRPA1P09661 255 aaKnown RBP17.02■□□□□ 0.32
RPS3-216ENST00000530721 TBC1D9BQ66K14 1250 aa17.02■□□□□ 0.32
RPS3-216ENST00000530721 USP16Q9Y5T5 823 aa17.02■□□□□ 0.32
RPS3-216ENST00000530721 TAF7Q15545 349 aaPredicted RBP17.01■□□□□ 0.31
RPS3-216ENST00000530721 PLEKHF1Q96S99 279 aa17■□□□□ 0.31
RPS3-216ENST00000530721 CARMIL3Q8ND23 1372 aa17■□□□□ 0.31
RPS3-216ENST00000530721 PRAMEF22A3QJZ6 481 aa16.99■□□□□ 0.31
RPS3-216ENST00000530721 CAMTA2O94983 1202 aa16.99■□□□□ 0.31
RPS3-216ENST00000530721 C9orf131Q5VYM1 1079 aa16.99■□□□□ 0.31
RPS3-216ENST00000530721 DZIP3Q86Y13 1208 aaKnown RBP16.99■□□□□ 0.31
RPS3-216ENST00000530721 PNNQ9H307 717 aaKnown RBP16.99■□□□□ 0.31
RPS3-216ENST00000530721 DLEC1Q9Y238 1755 aa16.99■□□□□ 0.31
RPS3-216ENST00000530721 H0YIN7 160 aa16.98■□□□□ 0.31
RPS3-216ENST00000530721 KIF3CO14782 793 aa16.98■□□□□ 0.31
RPS3-216ENST00000530721 RALBP1Q15311 655 aa16.98■□□□□ 0.31
RPS3-216ENST00000530721 C2CD5Q86YS7 1000 aa16.98■□□□□ 0.31
RPS3-216ENST00000530721 DLG5Q8TDM6 1919 aa16.98■□□□□ 0.31
RPS3-216ENST00000530721 PIP4K2AP48426 406 aaPredicted RBP16.97■□□□□ 0.31
RPS3-216ENST00000530721 NFE2L2Q16236 605 aa16.97■□□□□ 0.31
RPS3-216ENST00000530721 PRR5LQ6MZQ0 368 aa16.97■□□□□ 0.31
RPS3-216ENST00000530721 TTLL6Q8N841 843 aa16.97■□□□□ 0.31
RPS3-216ENST00000530721 PNISRQ8TF01 805 aaKnown RBP16.97■□□□□ 0.31
RPS3-216ENST00000530721 SETDB2Q96T68 719 aa16.97■□□□□ 0.31
RPS3-216ENST00000530721 PDZRN3Q9UPQ7 1066 aa16.97■□□□□ 0.31
RPS3-216ENST00000530721 BCORQ6W2J9 1755 aa16.97■□□□□ 0.31
RPS3-216ENST00000530721 MAPK8IP3Q9UPT6 1336 aa16.96■□□□□ 0.31
RPS3-216ENST00000530721 PDE6BP35913 854 aa16.96■□□□□ 0.31
RPS3-216ENST00000530721 CLEC4GQ6UXB4 293 aa16.96■□□□□ 0.31
RPS3-216ENST00000530721 BRIP1Q9BX63 1249 aa16.96■□□□□ 0.31
RPS3-216ENST00000530721 MIS18AQ9NYP9 233 aa16.96■□□□□ 0.31
RPS3-216ENST00000530721 RNF181Q9P0P0 153 aa16.96■□□□□ 0.31
RPS3-216ENST00000530721 CNBD1Q8NA66 436 aa16.95■□□□□ 0.3
RPS3-216ENST00000530721 ZNF652Q9Y2D9 606 aa16.95■□□□□ 0.3
RPS3-216ENST00000530721 ANKRD31Q8N7Z5 1873 aa16.95■□□□□ 0.3
RPS3-216ENST00000530721 NBPF26B4DH59 902 aa16.94■□□□□ 0.3
RPS3-216ENST00000530721 NPHP1O15259 732 aa16.94■□□□□ 0.3
RPS3-216ENST00000530721 NBPF10Q6P3W6 841 aaKnown RBP16.94■□□□□ 0.3
RPS3-216ENST00000530721 NBPF15Q8N660 670 aa16.94■□□□□ 0.3
RPS3-216ENST00000530721 SBF1O95248 1867 aa16.94■□□□□ 0.3
RPS3-216ENST00000530721 KDM3BQ7LBC6 1761 aa16.93■□□□□ 0.3
RPS3-216ENST00000530721 RGL2O15211 777 aa16.93■□□□□ 0.3
RPS3-216ENST00000530721 ST5P78524 1137 aa16.93■□□□□ 0.3
RPS3-216ENST00000530721 DDX10Q13206 875 aaKnown RBP16.93■□□□□ 0.3
RPS3-216ENST00000530721 CEP350Q5VT06 3117 aa16.92■□□□□ 0.3
RPS3-216ENST00000530721 LAMB4A4D0S4 1761 aa16.92■□□□□ 0.3
RPS3-216ENST00000530721 HSPA6P17066 643 aa16.92■□□□□ 0.3
RPS3-216ENST00000530721 RASSF7Q02833 373 aa16.92■□□□□ 0.3
RPS3-216ENST00000530721 CCDC24Q8N4L8 307 aa16.92■□□□□ 0.3
RPS3-216ENST00000530721 ZNF622Q969S3 477 aaKnown RBP eCLIP16.92■□□□□ 0.3
RPS3-216ENST00000530721 THUMPD2Q9BTF0 503 aaKnown RBP16.92■□□□□ 0.3
RPS3-216ENST00000530721 NMRK2Q9NPI5 230 aa16.92■□□□□ 0.3
RPS3-216ENST00000530721 TOMM70O94826 608 aa16.91■□□□□ 0.3
RPS3-216ENST00000530721 LMNB1P20700 586 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms