RNA–Protein interactions for RNA: ENST00000530404.5

TSPAN4-219, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-219ENST00000530404 DLEC1Q9Y238 1755 aa28.03■■■□□ 2.08
TSPAN4-219ENST00000530404 POLRMTO00411 1230 aaKnown RBP28.02■■■□□ 2.08
TSPAN4-219ENST00000530404 KIF3CO14782 793 aa28.02■■■□□ 2.08
TSPAN4-219ENST00000530404 ZPR1O75312 459 aa28.02■■■□□ 2.08
TSPAN4-219ENST00000530404 COL15A1P39059 1388 aa28.01■■■□□ 2.07
TSPAN4-219ENST00000530404 CHRNA5P30532 468 aa28.01■■■□□ 2.07
TSPAN4-219ENST00000530404 TM4SF1P30408 202 aa28■■■□□ 2.07
TSPAN4-219ENST00000530404 PIM2Q9P1W9 311 aa27.99■■■□□ 2.07
TSPAN4-219ENST00000530404 NPC1L1Q9UHC9 1359 aa27.99■■■□□ 2.07
TSPAN4-219ENST00000530404 ANKRD31Q8N7Z5 1873 aa27.96■■■□□ 2.07
TSPAN4-219ENST00000530404 HSPA6P17066 643 aa27.96■■■□□ 2.07
TSPAN4-219ENST00000530404 CANXP27824 592 aaKnown RBP27.96■■■□□ 2.07
TSPAN4-219ENST00000530404 NARFQ9UHQ1 456 aa27.96■■■□□ 2.07
TSPAN4-219ENST00000530404 CACNA1SQ13698 1873 aa27.95■■■□□ 2.07
TSPAN4-219ENST00000530404 SCN7AQ01118 1682 aa27.95■■■□□ 2.07
TSPAN4-219ENST00000530404 NFIXQ14938 502 aa27.95■■■□□ 2.06
TSPAN4-219ENST00000530404 DALRD3Q5D0E6 543 aaKnown RBP27.95■■■□□ 2.06
TSPAN4-219ENST00000530404 BCL2L12Q9HB09 334 aa27.95■■■□□ 2.06
TSPAN4-219ENST00000530404 C9orf131Q5VYM1 1079 aa27.94■■■□□ 2.06
TSPAN4-219ENST00000530404 TTC5Q8N0Z6 440 aa27.94■■■□□ 2.06
TSPAN4-219ENST00000530404 VSIG10Q8N0Z9 540 aa27.94■■■□□ 2.06
TSPAN4-219ENST00000530404 IL17REQ8NFR9 667 aa27.94■■■□□ 2.06
TSPAN4-219ENST00000530404 GNAT3A8MTJ3 354 aa27.92■■■□□ 2.06
TSPAN4-219ENST00000530404 GAS2L2Q8NHY3 880 aa27.92■■■□□ 2.06
TSPAN4-219ENST00000530404 NMRK2Q9NPI5 230 aa27.92■■■□□ 2.06
TSPAN4-219ENST00000530404 TEFQ10587 303 aa27.91■■■□□ 2.06
TSPAN4-219ENST00000530404 ZNF496Q96IT1 587 aaPredicted RBP27.91■■■□□ 2.06
TSPAN4-219ENST00000530404 HEG1Q9ULI3 1381 aa27.89■■■□□ 2.06
TSPAN4-219ENST00000530404 SERPINB2P05120 415 aa27.89■■■□□ 2.06
TSPAN4-219ENST00000530404 BICDL1Q6ZP65 573 aa27.89■■■□□ 2.06
TSPAN4-219ENST00000530404 BCORQ6W2J9 1755 aa27.88■■■□□ 2.05
TSPAN4-219ENST00000530404 CARMIL3Q8ND23 1372 aa27.88■■■□□ 2.05
TSPAN4-219ENST00000530404 COL11A2P13942 1736 aaPredicted RBP27.88■■■□□ 2.05
TSPAN4-219ENST00000530404 ZNF790Q6PG37 636 aa27.88■■■□□ 2.05
TSPAN4-219ENST00000530404 PHACTR3Q96KR7 559 aa27.88■■■□□ 2.05
TSPAN4-219ENST00000530404 RNF181Q9P0P0 153 aa27.88■■■□□ 2.05
TSPAN4-219ENST00000530404 TNRC6CQ9HCJ0 1690 aaKnown RBP27.87■■■□□ 2.05
TSPAN4-219ENST00000530404 TIAM2Q8IVF5 1701 aa27.87■■■□□ 2.05
TSPAN4-219ENST00000530404 DLG5Q8TDM6 1919 aa27.87■■■□□ 2.05
TSPAN4-219ENST00000530404 STARD3NLO95772 234 aa27.87■■■□□ 2.05
TSPAN4-219ENST00000530404 ZNF330Q9Y3S2 320 aaPredicted RBP27.87■■■□□ 2.05
TSPAN4-219ENST00000530404 PRKAR2BP31323 418 aa27.86■■■□□ 2.05
TSPAN4-219ENST00000530404 EIF5P55010 431 aaKnown RBP27.86■■■□□ 2.05
TSPAN4-219ENST00000530404 KCNQ3O43525 872 aa27.85■■■□□ 2.05
TSPAN4-219ENST00000530404 RASSF7Q02833 373 aa27.85■■■□□ 2.05
TSPAN4-219ENST00000530404 RSPH6AQ9H0K4 717 aa27.85■■■□□ 2.05
TSPAN4-219ENST00000530404 WDR90Q96KV7 1748 aa27.84■■■□□ 2.05
TSPAN4-219ENST00000530404 TOMM70O94826 608 aa27.83■■■□□ 2.05
TSPAN4-219ENST00000530404 CFAP53Q96M91 514 aa27.83■■■□□ 2.05
TSPAN4-219ENST00000530404 CEMIPQ8WUJ3 1361 aa27.83■■■□□ 2.05
TSPAN4-219ENST00000530404 TBC1D9BQ66K14 1250 aa27.82■■■□□ 2.04
TSPAN4-219ENST00000530404 TBC1D2BQ9UPU7 963 aa27.82■■■□□ 2.04
TSPAN4-219ENST00000530404 DICER1Q9UPY3 1922 aaKnown RBP27.82■■■□□ 2.04
TSPAN4-219ENST00000530404 C2CD5Q86YS7 1000 aa27.81■■■□□ 2.04
TSPAN4-219ENST00000530404 FMNL2Q96PY5 1086 aa27.81■■■□□ 2.04
TSPAN4-219ENST00000530404 A0A087WZG4 1122 aa27.8■■■□□ 2.04
TSPAN4-219ENST00000530404 A1BGP04217 495 aa27.8■■■□□ 2.04
TSPAN4-219ENST00000530404 CCDC24Q8N4L8 307 aa27.8■■■□□ 2.04
TSPAN4-219ENST00000530404 FER1L6Q2WGJ9 1857 aa27.8■■■□□ 2.04
TSPAN4-219ENST00000530404 BTBD11A6QL63 1104 aa27.79■■■□□ 2.04
TSPAN4-219ENST00000530404 PPP2R1AP30153 589 aa27.79■■■□□ 2.04
TSPAN4-219ENST00000530404 TEX13AQ9BXU3 409 aaPredicted RBP27.78■■■□□ 2.04
TSPAN4-219ENST00000530404 U2AF1L5P0DN76 240 aaPredicted RBP27.77■■■□□ 2.04
TSPAN4-219ENST00000530404 PIP4K2AP48426 406 aaPredicted RBP27.77■■■□□ 2.04
TSPAN4-219ENST00000530404 PRELPP51888 382 aa27.77■■■□□ 2.04
TSPAN4-219ENST00000530404 U2AF1Q01081 240 aaKnown RBP eCLIP27.77■■■□□ 2.04
TSPAN4-219ENST00000530404 TTLL6Q8N841 843 aa27.77■■■□□ 2.04
TSPAN4-219ENST00000530404 SLX4Q8IY92 1834 aa27.76■■■□□ 2.04
TSPAN4-219ENST00000530404 ARFGEF2Q9Y6D5 1785 aa27.76■■■□□ 2.03
TSPAN4-219ENST00000530404 PRAMEF22A3QJZ6 481 aa27.76■■■□□ 2.03
TSPAN4-219ENST00000530404 H0YIN7 160 aa27.76■■■□□ 2.03
TSPAN4-219ENST00000530404 IL6STP40189 918 aaPredicted RBP27.76■■■□□ 2.03
TSPAN4-219ENST00000530404 MCM10Q7L590 875 aa27.76■■■□□ 2.03
TSPAN4-219ENST00000530404 C16orf71Q8IYS4 520 aaPredicted RBP27.76■■■□□ 2.03
TSPAN4-219ENST00000530404 RRAGCQ9HB90 399 aa27.76■■■□□ 2.03
TSPAN4-219ENST00000530404 NUDCQ9Y266 331 aa27.76■■■□□ 2.03
TSPAN4-219ENST00000530404 KDM2BQ8NHM5 1336 aa27.75■■■□□ 2.03
TSPAN4-219ENST00000530404 APLP1P51693 650 aa27.75■■■□□ 2.03
TSPAN4-219ENST00000530404 USP16Q9Y5T5 823 aa27.74■■■□□ 2.03
TSPAN4-219ENST00000530404 LAMB4A4D0S4 1761 aa27.73■■■□□ 2.03
TSPAN4-219ENST00000530404 DCTN1Q14203 1278 aa27.73■■■□□ 2.03
TSPAN4-219ENST00000530404 PRR5LQ6MZQ0 368 aa27.73■■■□□ 2.03
TSPAN4-219ENST00000530404 CAMTA2O94983 1202 aa27.72■■■□□ 2.03
TSPAN4-219ENST00000530404 RBM46Q8TBY0 533 aaKnown RBP27.72■■■□□ 2.03
TSPAN4-219ENST00000530404 ZNF622Q969S3 477 aaKnown RBP eCLIP27.72■■■□□ 2.03
TSPAN4-219ENST00000530404 ZNF219Q9P2Y4 722 aaPredicted RBP27.72■■■□□ 2.03
TSPAN4-219ENST00000530404 RTF1Q92541 710 aaKnown RBP27.71■■■□□ 2.03
TSPAN4-219ENST00000530404 LMNB1P20700 586 aa27.7■■■□□ 2.02
TSPAN4-219ENST00000530404 NPM2Q86SE8 214 aaKnown RBP27.7■■■□□ 2.02
TSPAN4-219ENST00000530404 DZIP3Q86Y13 1208 aaKnown RBP27.7■■■□□ 2.02
TSPAN4-219ENST00000530404 KDM3BQ7LBC6 1761 aa27.69■■■□□ 2.02
TSPAN4-219ENST00000530404 NFKBIEO00221 500 aa27.69■■■□□ 2.02
TSPAN4-219ENST00000530404 HTRA3P83110 453 aa27.69■■■□□ 2.02
TSPAN4-219ENST00000530404 SETDB2Q96T68 719 aa27.68■■■□□ 2.02
TSPAN4-219ENST00000530404 BRIP1Q9BX63 1249 aa27.68■■■□□ 2.02
TSPAN4-219ENST00000530404 NPHP1O15259 732 aa27.67■■■□□ 2.02
TSPAN4-219ENST00000530404 PDE6BP35913 854 aa27.67■■■□□ 2.02
TSPAN4-219ENST00000530404 NUP98P52948 1817 aa27.67■■■□□ 2.02
TSPAN4-219ENST00000530404 C21orf2O43822 256 aa27.66■■■□□ 2.02
TSPAN4-219ENST00000530404 DNAJC5GQ8N7S2 189 aa27.66■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms