RNA–Protein interactions for RNA: ENST00000530005.5

SLC43A3-217, Transcript of solute carrier family 43 member 3, humanhuman

TSL 1 (best)

Gene SLC43A3, Length 1,434 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC43A3-217ENST00000530005 GOLGB1Q14789 3259 aaKnown RBP25.57■■□□□ 1.68
SLC43A3-217ENST00000530005 NLGN1Q8N2Q7 840 aa25.56■■□□□ 1.68
SLC43A3-217ENST00000530005 NLGN2Q8NFZ4 835 aa25.56■■□□□ 1.68
SLC43A3-217ENST00000530005 SRP68Q9UHB9 627 aaKnown RBP25.56■■□□□ 1.68
SLC43A3-217ENST00000530005 MMP10P09238 476 aa25.55■■□□□ 1.68
SLC43A3-217ENST00000530005 UTRNP46939 3433 aa25.55■■□□□ 1.68
SLC43A3-217ENST00000530005 RIPK4P57078 832 aa25.55■■□□□ 1.68
SLC43A3-217ENST00000530005 KDM3BQ7LBC6 1761 aa25.55■■□□□ 1.68
SLC43A3-217ENST00000530005 RUNDC1Q96C34 613 aa25.55■■□□□ 1.68
SLC43A3-217ENST00000530005 COL15A1P39059 1388 aa25.55■■□□□ 1.68
SLC43A3-217ENST00000530005 CCDC184Q52MB2 194 aa25.54■■□□□ 1.68
SLC43A3-217ENST00000530005 KLHL34Q8N239 644 aa25.54■■□□□ 1.68
SLC43A3-217ENST00000530005 MIS18AQ9NYP9 233 aa25.54■■□□□ 1.68
SLC43A3-217ENST00000530005 PRAMEF22A3QJZ6 481 aa25.54■■□□□ 1.68
SLC43A3-217ENST00000530005 EIF5P55010 431 aaKnown RBP25.54■■□□□ 1.68
SLC43A3-217ENST00000530005 CD2APQ9Y5K6 639 aa25.54■■□□□ 1.68
SLC43A3-217ENST00000530005 USP16Q9Y5T5 823 aa25.53■■□□□ 1.68
SLC43A3-217ENST00000530005 CANXP27824 592 aaKnown RBP25.52■■□□□ 1.68
SLC43A3-217ENST00000530005 FKBP8Q14318 412 aa25.52■■□□□ 1.68
SLC43A3-217ENST00000530005 PNISRQ8TF01 805 aaKnown RBP25.52■■□□□ 1.68
SLC43A3-217ENST00000530005 SNRPA1P09661 255 aaKnown RBP25.51■■□□□ 1.67
SLC43A3-217ENST00000530005 RRP7AQ9Y3A4 280 aaKnown RBP25.51■■□□□ 1.67
SLC43A3-217ENST00000530005 A1BGP04217 495 aa25.5■■□□□ 1.67
SLC43A3-217ENST00000530005 NARFQ9UHQ1 456 aa25.5■■□□□ 1.67
SLC43A3-217ENST00000530005 USPL1Q5W0Q7 1092 aa25.49■■□□□ 1.67
SLC43A3-217ENST00000530005 LMOD3Q0VAK6 560 aa25.48■■□□□ 1.67
SLC43A3-217ENST00000530005 BCL2L12Q9HB09 334 aa25.48■■□□□ 1.67
SLC43A3-217ENST00000530005 TRIM35Q9UPQ4 493 aa25.48■■□□□ 1.67
SLC43A3-217ENST00000530005 KIF13BQ9NQT8 1826 aa25.48■■□□□ 1.67
SLC43A3-217ENST00000530005 IL6STP40189 918 aaPredicted RBP25.47■■□□□ 1.67
SLC43A3-217ENST00000530005 EIF4A1P60842 406 aaKnown RBP25.47■■□□□ 1.67
SLC43A3-217ENST00000530005 ZPR1O75312 459 aa25.46■■□□□ 1.67
SLC43A3-217ENST00000530005 TM4SF1P30408 202 aa25.46■■□□□ 1.67
SLC43A3-217ENST00000530005 DDR1Q08345 913 aa25.46■■□□□ 1.67
SLC43A3-217ENST00000530005 DCAF8L1A6NGE4 600 aa25.46■■□□□ 1.67
SLC43A3-217ENST00000530005 ANP32CO43423 234 aa25.46■■□□□ 1.67
SLC43A3-217ENST00000530005 NEUROD2Q15784 382 aa25.46■■□□□ 1.67
SLC43A3-217ENST00000530005 C10orf71Q711Q0 1435 aa25.45■■□□□ 1.66
SLC43A3-217ENST00000530005 GIGYF1O75420 1035 aaPredicted RBP25.45■■□□□ 1.66
SLC43A3-217ENST00000530005 LAMB4A4D0S4 1761 aa25.44■■□□□ 1.66
SLC43A3-217ENST00000530005 BABAM1Q9NWV8 329 aa25.44■■□□□ 1.66
SLC43A3-217ENST00000530005 A0A087WZG4 1122 aa25.43■■□□□ 1.66
SLC43A3-217ENST00000530005 PARP3Q9Y6F1 533 aa25.43■■□□□ 1.66
SLC43A3-217ENST00000530005 KIAA1551Q9HCM1 1747 aa25.43■■□□□ 1.66
SLC43A3-217ENST00000530005 SCN7AQ01118 1682 aa25.42■■□□□ 1.66
SLC43A3-217ENST00000530005 NBPF26B4DH59 902 aa25.42■■□□□ 1.66
SLC43A3-217ENST00000530005 POLRMTO00411 1230 aaKnown RBP25.42■■□□□ 1.66
SLC43A3-217ENST00000530005 PIP4K2AP48426 406 aaPredicted RBP25.42■■□□□ 1.66
SLC43A3-217ENST00000530005 NBPF10Q6P3W6 841 aaKnown RBP25.42■■□□□ 1.66
SLC43A3-217ENST00000530005 NBPF15Q8N660 670 aa25.42■■□□□ 1.66
SLC43A3-217ENST00000530005 TSPYL4Q9UJ04 414 aa25.42■■□□□ 1.66
SLC43A3-217ENST00000530005 NFIXQ14938 502 aa25.41■■□□□ 1.66
SLC43A3-217ENST00000530005 APAF1O14727 1248 aa25.4■■□□□ 1.66
SLC43A3-217ENST00000530005 TBC1D2BQ9UPU7 963 aa25.4■■□□□ 1.66
SLC43A3-217ENST00000530005 YBX3P16989 372 aaKnown RBP eCLIP25.39■■□□□ 1.661e-8■■□□□ 11.7
SLC43A3-217ENST00000530005 GPR162Q16538 588 aa25.39■■□□□ 1.66
SLC43A3-217ENST00000530005 PXDNLA1KZ92 1463 aa25.39■■□□□ 1.66
SLC43A3-217ENST00000530005 CHL1O00533 1208 aa25.38■■□□□ 1.65
SLC43A3-217ENST00000530005 CAMTA2O94983 1202 aa25.38■■□□□ 1.65
SLC43A3-217ENST00000530005 ZNF330Q9Y3S2 320 aaPredicted RBP25.38■■□□□ 1.65
SLC43A3-217ENST00000530005 NRXN2Q9P2S2 1712 aa25.38■■□□□ 1.65
SLC43A3-217ENST00000530005 BCORQ6W2J9 1755 aa25.38■■□□□ 1.65
SLC43A3-217ENST00000530005 MRS2Q9HD23 443 aa25.37■■□□□ 1.65
SLC43A3-217ENST00000530005 AFDNP55196 1824 aaKnown RBP25.37■■□□□ 1.65
SLC43A3-217ENST00000530005 TGFB2P61812 414 aa25.36■■□□□ 1.65
SLC43A3-217ENST00000530005 DZIP3Q86Y13 1208 aaKnown RBP25.36■■□□□ 1.65
SLC43A3-217ENST00000530005 N4BP2Q86UW6 1770 aaPredicted RBP25.35■■□□□ 1.65
SLC43A3-217ENST00000530005 TBC1D9BQ66K14 1250 aa25.34■■□□□ 1.65
SLC43A3-217ENST00000530005 PELP1Q8IZL8 1130 aaKnown RBP25.34■■□□□ 1.65
SLC43A3-217ENST00000530005 CHD4Q14839 1912 aa25.32■■□□□ 1.64
SLC43A3-217ENST00000530005 NPM2Q86SE8 214 aaKnown RBP25.32■■□□□ 1.64
SLC43A3-217ENST00000530005 A0A0G2JLW4 131 aa25.31■■□□□ 1.64
SLC43A3-217ENST00000530005 SERPINB2P05120 415 aa25.31■■□□□ 1.64
SLC43A3-217ENST00000530005 KCNA3P22001 575 aa25.31■■□□□ 1.64
SLC43A3-217ENST00000530005 BRCA1P38398 1863 aaKnown RBP25.31■■□□□ 1.64
SLC43A3-217ENST00000530005 ZNF853P0CG23 659 aa25.3■■□□□ 1.64
SLC43A3-217ENST00000530005 DPEP1P16444 411 aa25.3■■□□□ 1.64
SLC43A3-217ENST00000530005 BICDL1Q6ZP65 573 aa25.3■■□□□ 1.64
SLC43A3-217ENST00000530005 CFAP44Q96MT7 982 aa25.3■■□□□ 1.64
SLC43A3-217ENST00000530005 ERBB4Q15303 1308 aa25.3■■□□□ 1.64
SLC43A3-217ENST00000530005 RGL2O15211 777 aa25.29■■□□□ 1.64
SLC43A3-217ENST00000530005 YY1P25490 414 aa25.29■■□□□ 1.64
SLC43A3-217ENST00000530005 KRT24Q2M2I5 525 aa25.29■■□□□ 1.64
SLC43A3-217ENST00000530005 LRP10Q7Z4F1 713 aa25.29■■□□□ 1.64
SLC43A3-217ENST00000530005 GRIN3BO60391 1043 aa25.29■■□□□ 1.64
SLC43A3-217ENST00000530005 CLEC4GQ6UXB4 293 aa25.29■■□□□ 1.64
SLC43A3-217ENST00000530005 WWC3Q9ULE0 1092 aa25.29■■□□□ 1.64
SLC43A3-217ENST00000530005 LAS1LQ9Y4W2 734 aaKnown RBP25.29■■□□□ 1.64
SLC43A3-217ENST00000530005 PDIA6Q15084 440 aa25.28■■□□□ 1.64
SLC43A3-217ENST00000530005 CARMIL3Q8ND23 1372 aa25.27■■□□□ 1.64
SLC43A3-217ENST00000530005 MBIPQ9NS73 344 aa25.27■■□□□ 1.64
SLC43A3-217ENST00000530005 IFT57Q9NWB7 429 aa25.26■■□□□ 1.63
SLC43A3-217ENST00000530005 CCDC27Q2M243 656 aa25.25■■□□□ 1.63
SLC43A3-217ENST00000530005 MYL6BP14649 208 aa25.24■■□□□ 1.63
SLC43A3-217ENST00000530005 EIF2S2P20042 333 aaKnown RBP25.24■■□□□ 1.63
SLC43A3-217ENST00000530005 HLFQ16534 295 aa25.24■■□□□ 1.63
SLC43A3-217ENST00000530005 TTLL7Q6ZT98 887 aa25.24■■□□□ 1.63
SLC43A3-217ENST00000530005 SETDB2Q96T68 719 aa25.24■■□□□ 1.63
SLC43A3-217ENST00000530005 CHRNA5P30532 468 aa25.23■■□□□ 1.63
SLC43A3-217ENST00000530005 CALD1Q05682 793 aaKnown RBP25.23■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms