RNA–Protein interactions for RNA: ENST00000529846.5

PUM1-220, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 3

Gene PUM1, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-220ENST00000529846 RBM42Q9BTD8 480 aaKnown RBP6.86□□□□□ -1.31
PUM1-220ENST00000529846 HEG1Q9ULI3 1381 aa6.85□□□□□ -1.31
PUM1-220ENST00000529846 SHANK3Q9BYB0 1731 aa6.85□□□□□ -1.31
PUM1-220ENST00000529846 RNF123Q5XPI4 1314 aa6.85□□□□□ -1.31
PUM1-220ENST00000529846 PTCD1O75127 700 aaKnown RBP6.85□□□□□ -1.31
PUM1-220ENST00000529846 GIGYF1O75420 1035 aaPredicted RBP6.85□□□□□ -1.31
PUM1-220ENST00000529846 RPS6KA4O75676 772 aa6.85□□□□□ -1.31
PUM1-220ENST00000529846 IL6STP40189 918 aaPredicted RBP6.85□□□□□ -1.31
PUM1-220ENST00000529846 EIF4A1P60842 406 aaKnown RBP6.85□□□□□ -1.31
PUM1-220ENST00000529846 EZH2Q15910 746 aaKnown RBP6.85□□□□□ -1.31
PUM1-220ENST00000529846 SLC15A2Q16348 729 aa6.85□□□□□ -1.31
PUM1-220ENST00000529846 TRAPPC3LQ5T215 181 aa6.85□□□□□ -1.31
PUM1-220ENST00000529846 TFCP2L1Q9NZI6 479 aa6.85□□□□□ -1.31
PUM1-220ENST00000529846 RRP7AQ9Y3A4 280 aaKnown RBP6.85□□□□□ -1.31
PUM1-220ENST00000529846 RTCBQ9Y3I0 505 aaKnown RBP6.85□□□□□ -1.31
PUM1-220ENST00000529846 CACNA1FO60840 1977 aa6.85□□□□□ -1.31
PUM1-220ENST00000529846 SCN11AQ9UI33 1791 aa6.85□□□□□ -1.31
PUM1-220ENST00000529846 CYP19A1P11511 503 aaPredicted RBP6.84□□□□□ -1.31
PUM1-220ENST00000529846 SLFN5Q08AF3 891 aa6.84□□□□□ -1.31
PUM1-220ENST00000529846 DCTN1Q14203 1278 aa6.84□□□□□ -1.31
PUM1-220ENST00000529846 CCDC30Q5VVM6 783 aa6.84□□□□□ -1.31
PUM1-220ENST00000529846 DEFB132Q7Z7B7 95 aa6.84□□□□□ -1.31
PUM1-220ENST00000529846 NLGN1Q8N2Q7 840 aa6.84□□□□□ -1.31
PUM1-220ENST00000529846 AKT1S1Q96B36 256 aa6.84□□□□□ -1.31
PUM1-220ENST00000529846 ZNF496Q96IT1 587 aaPredicted RBP6.84□□□□□ -1.31
PUM1-220ENST00000529846 CCDC87Q9NVE4 849 aa6.84□□□□□ -1.31
PUM1-220ENST00000529846 HYPKQ9NX55 129 aa6.84□□□□□ -1.31
PUM1-220ENST00000529846 DBF4Q9UBU7 674 aaPredicted RBP6.84□□□□□ -1.31
PUM1-220ENST00000529846 SBF2Q86WG5 1849 aa6.84□□□□□ -1.31
PUM1-220ENST00000529846 SLC39A6Q13433 755 aa6.83□□□□□ -1.32
PUM1-220ENST00000529846 DUSP27Q5VZP5 1158 aa6.83□□□□□ -1.32
PUM1-220ENST00000529846 CLEC4GQ6UXB4 293 aa6.83□□□□□ -1.32
PUM1-220ENST00000529846 TRMT2AQ8IZ69 625 aaKnown RBP6.83□□□□□ -1.32
PUM1-220ENST00000529846 STK31Q9BXU1 1019 aa6.83□□□□□ -1.32
PUM1-220ENST00000529846 MBIPQ9NS73 344 aa6.83□□□□□ -1.32
PUM1-220ENST00000529846 ZNF652Q9Y2D9 606 aa6.83□□□□□ -1.32
PUM1-220ENST00000529846 LAS1LQ9Y4W2 734 aaKnown RBP6.83□□□□□ -1.32
PUM1-220ENST00000529846 DOT1LQ8TEK3 1739 aa6.83□□□□□ -1.32
PUM1-220ENST00000529846 ERVV-1B6SEH8 477 aa6.82□□□□□ -1.32
PUM1-220ENST00000529846 ZPR1O75312 459 aa6.82□□□□□ -1.32
PUM1-220ENST00000529846 DDX58O95786 925 aaKnown RBP6.82□□□□□ -1.32
PUM1-220ENST00000529846 HSP90B1P14625 803 aaKnown RBP6.82□□□□□ -1.32
PUM1-220ENST00000529846 RFC4P35249 363 aa6.82□□□□□ -1.32
PUM1-220ENST00000529846 CRKLP46109 303 aaKnown RBP6.82□□□□□ -1.32
PUM1-220ENST00000529846 PTF1AQ7RTS3 328 aa6.82□□□□□ -1.32
PUM1-220ENST00000529846 DDX21Q9NR30 783 aaKnown RBP eCLIP6.82□□□□□ -1.32
PUM1-220ENST00000529846 LRRC4BQ9NT99 713 aa6.82□□□□□ -1.32
PUM1-220ENST00000529846 RCAN3Q9UKA8 241 aa6.82□□□□□ -1.32
PUM1-220ENST00000529846 SALL2Q9Y467 1007 aaPredicted RBP6.82□□□□□ -1.32
PUM1-220ENST00000529846 BTAF1O14981 1849 aa6.82□□□□□ -1.32
PUM1-220ENST00000529846 CICQ96RK0 1608 aaPredicted RBP6.82□□□□□ -1.32
PUM1-220ENST00000529846 SIPA1L3O60292 1781 aaPredicted RBP6.82□□□□□ -1.32
PUM1-220ENST00000529846 TNS1Q9HBL0 1735 aaKnown RBP6.81□□□□□ -1.32
PUM1-220ENST00000529846 EP400Q96L91 3159 aa6.81□□□□□ -1.32
PUM1-220ENST00000529846 ITGB4P16144 1822 aa6.81□□□□□ -1.32
PUM1-220ENST00000529846 GNPATO15228 680 aa6.81□□□□□ -1.32
PUM1-220ENST00000529846 EIF5P55010 431 aaKnown RBP6.81□□□□□ -1.32
PUM1-220ENST00000529846 ITPK1Q13572 414 aa6.81□□□□□ -1.32
PUM1-220ENST00000529846 TWISTNBQ3B726 338 aaPredicted RBP6.81□□□□□ -1.32
PUM1-220ENST00000529846 ALDH1L2Q3SY69 923 aa6.81□□□□□ -1.32
PUM1-220ENST00000529846 HSP90AB3PQ58FF7 597 aa6.81□□□□□ -1.32
PUM1-220ENST00000529846 HDGFL1Q5TGJ6 251 aa6.81□□□□□ -1.32
PUM1-220ENST00000529846 INTS5Q6P9B9 1019 aaKnown RBP6.81□□□□□ -1.32
PUM1-220ENST00000529846 KIF6Q6ZMV9 814 aa6.81□□□□□ -1.32
PUM1-220ENST00000529846 DNAJC10Q8IXB1 793 aa6.81□□□□□ -1.32
PUM1-220ENST00000529846 CDCA7LQ96GN5 454 aa6.81□□□□□ -1.32
PUM1-220ENST00000529846 THUMPD2Q9BTF0 503 aaKnown RBP6.81□□□□□ -1.32
PUM1-220ENST00000529846 MTFR1LQ9H019 292 aa6.81□□□□□ -1.32
PUM1-220ENST00000529846 NARFQ9UHQ1 456 aa6.81□□□□□ -1.32
PUM1-220ENST00000529846 PDZRN3Q9UPQ7 1066 aa6.81□□□□□ -1.32
PUM1-220ENST00000529846 SUPT16HQ9Y5B9 1047 aaKnown RBP6.81□□□□□ -1.32
PUM1-220ENST00000529846 KDM3BQ7LBC6 1761 aa6.81□□□□□ -1.32
PUM1-220ENST00000529846 LY75O60449 1722 aa6.81□□□□□ -1.32
PUM1-220ENST00000529846 KCPQ6ZWJ8 1503 aa6.81□□□□□ -1.32
PUM1-220ENST00000529846 FANCIQ9NVI1 1328 aa6.8□□□□□ -1.32
PUM1-220ENST00000529846 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.8□□□□□ -1.32
PUM1-220ENST00000529846 POLD1P28340 1107 aa6.8□□□□□ -1.32
PUM1-220ENST00000529846 BRPF1P55201 1214 aaPredicted RBP6.8□□□□□ -1.32
PUM1-220ENST00000529846 RRP1P56182 461 aaKnown RBP6.8□□□□□ -1.32
PUM1-220ENST00000529846 KLHL34Q8N239 644 aa6.8□□□□□ -1.32
PUM1-220ENST00000529846 PLCD3Q8N3E9 789 aa6.8□□□□□ -1.32
PUM1-220ENST00000529846 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.8□□□□□ -1.32
PUM1-220ENST00000529846 LINC00116Q8NCU8 138 aa6.8□□□□□ -1.32
PUM1-220ENST00000529846 SLC4A9Q96Q91 983 aa6.8□□□□□ -1.32
PUM1-220ENST00000529846 SPON1Q9HCB6 807 aa6.8□□□□□ -1.32
PUM1-220ENST00000529846 MIS18AQ9NYP9 233 aa6.8□□□□□ -1.32
PUM1-220ENST00000529846 HDAC5Q9UQL6 1122 aa6.8□□□□□ -1.32
PUM1-220ENST00000529846 USP16Q9Y5T5 823 aa6.8□□□□□ -1.32
PUM1-220ENST00000529846 C5P01031 1676 aa6.8□□□□□ -1.32
PUM1-220ENST00000529846 N4BP2Q86UW6 1770 aaPredicted RBP6.8□□□□□ -1.32
PUM1-220ENST00000529846 TOGARAM1Q9Y4F4 1720 aa6.79□□□□□ -1.32
PUM1-220ENST00000529846 IPO8O15397 1037 aaKnown RBP6.79□□□□□ -1.32
PUM1-220ENST00000529846 VAMP4O75379 141 aa6.79□□□□□ -1.32
PUM1-220ENST00000529846 MS4A1P11836 297 aa6.79□□□□□ -1.32
PUM1-220ENST00000529846 ARHGAP45Q92619 1136 aa6.79□□□□□ -1.32
PUM1-220ENST00000529846 PAPPAQ13219 1627 aa6.79□□□□□ -1.32
PUM1-220ENST00000529846 RREB1Q92766 1687 aa6.78□□□□□ -1.32
PUM1-220ENST00000529846 UBR2Q8IWV8 1755 aa6.78□□□□□ -1.32
PUM1-220ENST00000529846 KCNQ3O43525 872 aa6.78□□□□□ -1.32
PUM1-220ENST00000529846 A1BGP04217 495 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms