RNA–Protein interactions for RNA: ENST00000529689.5

CCDC90B-214, Transcript of coiled-coil domain containing 90B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC90B, Length 4,014 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-214ENST00000529689 STK38Q15208 465 aa11.76□□□□□ -0.53
CCDC90B-214ENST00000529689 MAP3K11Q16584 847 aa11.76□□□□□ -0.53
CCDC90B-214ENST00000529689 PDILTQ8N807 584 aa11.76□□□□□ -0.53
CCDC90B-214ENST00000529689 GADD45BO75293 160 aaPredicted RBP11.75□□□□□ -0.53
CCDC90B-214ENST00000529689 LETM1O95202 739 aaPredicted RBP11.75□□□□□ -0.53
CCDC90B-214ENST00000529689 AK2P54819 239 aa11.75□□□□□ -0.53
CCDC90B-214ENST00000529689 KLHDC4Q8TBB5 520 aa11.75□□□□□ -0.53
CCDC90B-214ENST00000529689 PHF8Q9UPP1 1060 aa11.75□□□□□ -0.53
CCDC90B-214ENST00000529689 ABCC2Q92887 1545 aa11.75□□□□□ -0.53
CCDC90B-214ENST00000529689 CHL1O00533 1208 aa11.75□□□□□ -0.53
CCDC90B-214ENST00000529689 TRIM29Q14134 588 aa11.75□□□□□ -0.53
CCDC90B-214ENST00000529689 C16orf45Q96MC5 204 aaPredicted RBP11.75□□□□□ -0.53
CCDC90B-214ENST00000529689 TMEM63CQ9P1W3 806 aa11.75□□□□□ -0.53
CCDC90B-214ENST00000529689 ZNF518AQ6AHZ1 1483 aa11.74□□□□□ -0.53
CCDC90B-214ENST00000529689 TTLL5Q6EMB2 1281 aa11.74□□□□□ -0.53
CCDC90B-214ENST00000529689 UBE3BQ7Z3V4 1068 aa11.74□□□□□ -0.53
CCDC90B-214ENST00000529689 DBF4Q9UBU7 674 aaPredicted RBP11.74□□□□□ -0.53
CCDC90B-214ENST00000529689 NBPF7P0C2Y1 421 aaPredicted RBP11.74□□□□□ -0.53
CCDC90B-214ENST00000529689 TATP17735 454 aaPredicted RBP11.74□□□□□ -0.53
CCDC90B-214ENST00000529689 ATF3P18847 181 aa11.74□□□□□ -0.53
CCDC90B-214ENST00000529689 CABP4P57796 275 aa11.74□□□□□ -0.53
CCDC90B-214ENST00000529689 ISM2Q6H9L7 571 aa11.74□□□□□ -0.53
CCDC90B-214ENST00000529689 DDX46Q7L014 1031 aaKnown RBP11.74□□□□□ -0.53
CCDC90B-214ENST00000529689 CCDC82Q8N4S0 544 aa11.74□□□□□ -0.53
CCDC90B-214ENST00000529689 TRMT1Q9NXH9 659 aaKnown RBP11.74□□□□□ -0.53
CCDC90B-214ENST00000529689 NDUFB9Q9Y6M9 179 aa11.74□□□□□ -0.53
CCDC90B-214ENST00000529689 KAT6BQ8WYB5 2073 aa11.74□□□□□ -0.53
CCDC90B-214ENST00000529689 LMBRD1Q9NUN5 540 aa11.74□□□□□ -0.53
CCDC90B-214ENST00000529689 TSC1Q92574 1164 aa11.73□□□□□ -0.53
CCDC90B-214ENST00000529689 ZMYND15Q9H091 742 aa11.73□□□□□ -0.53
CCDC90B-214ENST00000529689 HIP1O00291 1037 aa11.73□□□□□ -0.53
CCDC90B-214ENST00000529689 HAND2P61296 217 aa11.73□□□□□ -0.53
CCDC90B-214ENST00000529689 HMGN5P82970 282 aaKnown RBP11.73□□□□□ -0.53
CCDC90B-214ENST00000529689 PUS7Q96PZ0 661 aaKnown RBP11.73□□□□□ -0.53
CCDC90B-214ENST00000529689 SPDYE4A6NLX3 237 aa11.73□□□□□ -0.53
CCDC90B-214ENST00000529689 ZSCAN22P10073 491 aaPredicted RBP11.73□□□□□ -0.53
CCDC90B-214ENST00000529689 ZSCAN31Q96LW9 406 aaPredicted RBP11.73□□□□□ -0.53
CCDC90B-214ENST00000529689 PPP6R1Q9UPN7 881 aa11.73□□□□□ -0.53
CCDC90B-214ENST00000529689 ABCA8O94911 1581 aa11.73□□□□□ -0.53
CCDC90B-214ENST00000529689 TTC37Q6PGP7 1564 aa11.73□□□□□ -0.53
CCDC90B-214ENST00000529689 ABCC1P33527 1531 aa11.72□□□□□ -0.53
CCDC90B-214ENST00000529689 ATP7AQ04656 1500 aa11.72□□□□□ -0.53
CCDC90B-214ENST00000529689 A0A087WZG4 1122 aa11.72□□□□□ -0.53
CCDC90B-214ENST00000529689 BIN1O00499 593 aa11.72□□□□□ -0.53
CCDC90B-214ENST00000529689 AKAP17AQ02040 695 aaKnown RBP11.72□□□□□ -0.53
CCDC90B-214ENST00000529689 LGR6Q9HBX8 967 aa11.72□□□□□ -0.53
CCDC90B-214ENST00000529689 CHRNA2Q15822 529 aa11.72□□□□□ -0.53
CCDC90B-214ENST00000529689 RBM8AQ9Y5S9 174 aaKnown RBP11.72□□□□□ -0.53
CCDC90B-214ENST00000529689 SYT1P21579 422 aa11.72□□□□□ -0.53
CCDC90B-214ENST00000529689 CHST3Q7LGC8 479 aa11.72□□□□□ -0.53
CCDC90B-214ENST00000529689 ZBTB3Q9H5J0 574 aa11.71□□□□□ -0.53
CCDC90B-214ENST00000529689 RIMS2Q9UQ26 1411 aa11.71□□□□□ -0.53
CCDC90B-214ENST00000529689 BRPF1P55201 1214 aaPredicted RBP11.71□□□□□ -0.53
CCDC90B-214ENST00000529689 ANKRD1Q15327 319 aa11.71□□□□□ -0.53
CCDC90B-214ENST00000529689 UNC5CLQ8IV45 518 aa11.71□□□□□ -0.53
CCDC90B-214ENST00000529689 ZKSCAN5Q9Y2L8 839 aa11.71□□□□□ -0.53
CCDC90B-214ENST00000529689 PRDM15P57071 1507 aaPredicted RBP11.71□□□□□ -0.54
CCDC90B-214ENST00000529689 GOLIM4O00461 696 aa11.71□□□□□ -0.54
CCDC90B-214ENST00000529689 IGSF3O75054 1194 aa11.71□□□□□ -0.54
CCDC90B-214ENST00000529689 BRF1Q92994 677 aa11.71□□□□□ -0.54
CCDC90B-214ENST00000529689 ZBTB9Q96C00 473 aa11.71□□□□□ -0.54
CCDC90B-214ENST00000529689 MAP7D2Q96T17 732 aa11.71□□□□□ -0.54
CCDC90B-214ENST00000529689 TOM1L2Q6ZVM7 507 aa11.7□□□□□ -0.54
CCDC90B-214ENST00000529689 ARHGEF5Q12774 1597 aa11.7□□□□□ -0.54
CCDC90B-214ENST00000529689 UBE2HP62256 183 aa11.7□□□□□ -0.54
CCDC90B-214ENST00000529689 CCDC112Q8NEF3 446 aa11.7□□□□□ -0.54
CCDC90B-214ENST00000529689 DACT1Q9NYF0 836 aa11.7□□□□□ -0.54
CCDC90B-214ENST00000529689 CEP126Q9P2H0 1117 aa11.7□□□□□ -0.54
CCDC90B-214ENST00000529689 KCNQ3O43525 872 aa11.7□□□□□ -0.54
CCDC90B-214ENST00000529689 POLR3DP05423 398 aaPredicted RBP11.7□□□□□ -0.54
CCDC90B-214ENST00000529689 ZNF165P49910 485 aa11.7□□□□□ -0.54
CCDC90B-214ENST00000529689 LRRFIP1Q32MZ4 808 aaKnown RBP11.7□□□□□ -0.54
CCDC90B-214ENST00000529689 TTC39AQ5SRH9 613 aa11.7□□□□□ -0.54
CCDC90B-214ENST00000529689 LARP1Q6PKG0 1096 aaKnown RBP11.7□□□□□ -0.54
CCDC90B-214ENST00000529689 COPS6Q7L5N1 327 aa11.7□□□□□ -0.54
CCDC90B-214ENST00000529689 ZHX1Q9UKY1 873 aaPredicted RBP11.7□□□□□ -0.54
CCDC90B-214ENST00000529689 ABCC4O15439 1325 aa11.69□□□□□ -0.54
CCDC90B-214ENST00000529689 IDH1O75874 414 aaKnown RBP11.69□□□□□ -0.54
CCDC90B-214ENST00000529689 EDC3Q96F86 508 aaKnown RBP11.69□□□□□ -0.54
CCDC90B-214ENST00000529689 CNNM1Q9NRU3 951 aa11.69□□□□□ -0.54
CCDC90B-214ENST00000529689 ERCC6L2Q5T890 1561 aa11.69□□□□□ -0.54
CCDC90B-214ENST00000529689 PIBF1Q8WXW3 757 aa11.69□□□□□ -0.54
CCDC90B-214ENST00000529689 PDCL3Q9H2J4 239 aa11.69□□□□□ -0.54
CCDC90B-214ENST00000529689 FSD2A1L4K1 749 aa11.69□□□□□ -0.54
CCDC90B-214ENST00000529689 CCDC57Q2TAC2 916 aa11.69□□□□□ -0.54
CCDC90B-214ENST00000529689 MNS1Q8NEH6 495 aa11.69□□□□□ -0.54
CCDC90B-214ENST00000529689 EVI5LQ96CN4 794 aa11.69□□□□□ -0.54
CCDC90B-214ENST00000529689 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.69□□□□□ -0.54
CCDC90B-214ENST00000529689 PIK3R4Q99570 1358 aa11.68□□□□□ -0.54
CCDC90B-214ENST00000529689 CDC42BPAQ5VT25 1732 aa11.68□□□□□ -0.54
CCDC90B-214ENST00000529689 F13A1P00488 732 aa11.68□□□□□ -0.54
CCDC90B-214ENST00000529689 NMIQ13287 307 aaPredicted RBP11.68□□□□□ -0.54
CCDC90B-214ENST00000529689 NOLC1Q14978 699 aaKnown RBP eCLIP11.68□□□□□ -0.54
CCDC90B-214ENST00000529689 CCDC186Q7Z3E2 898 aa11.68□□□□□ -0.54
CCDC90B-214ENST00000529689 GPT2Q8TD30 523 aa11.68□□□□□ -0.54
CCDC90B-214ENST00000529689 XAGE3Q8WTP9 111 aa11.68□□□□□ -0.54
CCDC90B-214ENST00000529689 FAM227BQ96M60 508 aa11.68□□□□□ -0.54
CCDC90B-214ENST00000529689 HSP90AA4PQ58FG1 418 aa11.68□□□□□ -0.54
CCDC90B-214ENST00000529689 ANKLE2Q86XL3 938 aa11.68□□□□□ -0.54
CCDC90B-214ENST00000529689 CCDC144CPQ8IYA2 1237 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms