RNA–Protein interactions for RNA: ENST00000528653.1

EIF3F-202, Transcript of eukaryotic translation initiation factor 3 subunit F, humanhuman

TSL 2

Gene EIF3F, Length 739 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3F-202ENST00000528653 ANO8Q9HCE9 1232 aaPredicted RBP17.69■□□□□ 0.42
EIF3F-202ENST00000528653 USP16Q9Y5T5 823 aa17.69■□□□□ 0.42
EIF3F-202ENST00000528653 TUBGCP6Q96RT7 1819 aa17.69■□□□□ 0.42
EIF3F-202ENST00000528653 TRMT2AQ8IZ69 625 aaKnown RBP17.68■□□□□ 0.42
EIF3F-202ENST00000528653 CNTNAP4Q9C0A0 1308 aa17.68■□□□□ 0.42
EIF3F-202ENST00000528653 STARD3NLO95772 234 aa17.67■□□□□ 0.42
EIF3F-202ENST00000528653 HOXB7P09629 217 aa17.67■□□□□ 0.42
EIF3F-202ENST00000528653 CRKLP46109 303 aaKnown RBP17.67■□□□□ 0.42
EIF3F-202ENST00000528653 ZNF827Q17R98 1081 aa17.67■□□□□ 0.42
EIF3F-202ENST00000528653 TWISTNBQ3B726 338 aaPredicted RBP17.67■□□□□ 0.42
EIF3F-202ENST00000528653 TEX13AQ9BXU3 409 aaPredicted RBP17.67■□□□□ 0.42
EIF3F-202ENST00000528653 LRP5O75197 1615 aa17.67■□□□□ 0.42
EIF3F-202ENST00000528653 UBR3Q6ZT12 1888 aa17.67■□□□□ 0.42
EIF3F-202ENST00000528653 EIF2S2P20042 333 aaKnown RBP17.66■□□□□ 0.42
EIF3F-202ENST00000528653 NECTIN2Q92692 538 aa17.66■□□□□ 0.42
EIF3F-202ENST00000528653 AK7Q96M32 723 aa17.66■□□□□ 0.42
EIF3F-202ENST00000528653 CCDC87Q9NVE4 849 aa17.66■□□□□ 0.42
EIF3F-202ENST00000528653 GNPATO15228 680 aa17.65■□□□□ 0.42
EIF3F-202ENST00000528653 A1BGP04217 495 aa17.65■□□□□ 0.42
EIF3F-202ENST00000528653 PIP4K2AP48426 406 aaPredicted RBP17.65■□□□□ 0.42
EIF3F-202ENST00000528653 HDGFL1Q5TGJ6 251 aa17.65■□□□□ 0.42
EIF3F-202ENST00000528653 STK32BQ9NY57 414 aa17.65■□□□□ 0.42
EIF3F-202ENST00000528653 ZBTB1Q9Y2K1 713 aa17.65■□□□□ 0.42
EIF3F-202ENST00000528653 INTS5Q6P9B9 1019 aaKnown RBP17.64■□□□□ 0.41
EIF3F-202ENST00000528653 AKT1S1Q96B36 256 aa17.64■□□□□ 0.41
EIF3F-202ENST00000528653 SOS1Q07889 1333 aaPredicted RBP17.64■□□□□ 0.41
EIF3F-202ENST00000528653 HMGB2P26583 209 aaKnown RBP17.63■□□□□ 0.41
EIF3F-202ENST00000528653 CANXP27824 592 aaKnown RBP17.63■□□□□ 0.41
EIF3F-202ENST00000528653 RC3H1Q5TC82 1133 aaKnown RBP17.63■□□□□ 0.41
EIF3F-202ENST00000528653 QSER1Q2KHR3 1735 aa17.63■□□□□ 0.41
EIF3F-202ENST00000528653 C4AP0C0L4 1744 aa17.62■□□□□ 0.41
EIF3F-202ENST00000528653 R3HDM1Q15032 1099 aaKnown RBP17.62■□□□□ 0.41
EIF3F-202ENST00000528653 NBPF14Q5TI25 921 aa17.62■□□□□ 0.41
EIF3F-202ENST00000528653 AMIGO3Q86WK7 504 aa17.62■□□□□ 0.41
EIF3F-202ENST00000528653 NBPF26B4DH59 902 aa17.61■□□□□ 0.41
EIF3F-202ENST00000528653 TCERG1O14776 1098 aaKnown RBP17.61■□□□□ 0.41
EIF3F-202ENST00000528653 VAMP4O75379 141 aa17.61■□□□□ 0.41
EIF3F-202ENST00000528653 PHF14O94880 888 aa17.61■□□□□ 0.41
EIF3F-202ENST00000528653 ANXA1P04083 346 aa17.61■□□□□ 0.41
EIF3F-202ENST00000528653 SLC15A2Q16348 729 aa17.61■□□□□ 0.41
EIF3F-202ENST00000528653 NBPF10Q6P3W6 841 aaKnown RBP17.61■□□□□ 0.41
EIF3F-202ENST00000528653 SMIM5Q71RC9 77 aa17.61■□□□□ 0.41
EIF3F-202ENST00000528653 NBPF15Q8N660 670 aa17.61■□□□□ 0.41
EIF3F-202ENST00000528653 TFCP2L1Q9NZI6 479 aa17.61■□□□□ 0.41
EIF3F-202ENST00000528653 CHPF2Q9P2E5 772 aa17.61■□□□□ 0.41
EIF3F-202ENST00000528653 ZNF330Q9Y3S2 320 aaPredicted RBP17.61■□□□□ 0.41
EIF3F-202ENST00000528653 ERBB4Q15303 1308 aa17.61■□□□□ 0.41
EIF3F-202ENST00000528653 RPS6KA4O75676 772 aa17.6■□□□□ 0.41
EIF3F-202ENST00000528653 PROSER3Q2NL68 480 aa17.6■□□□□ 0.41
EIF3F-202ENST00000528653 RTCBQ9Y3I0 505 aaKnown RBP17.6■□□□□ 0.41
EIF3F-202ENST00000528653 COL15A1P39059 1388 aa17.6■□□□□ 0.41
EIF3F-202ENST00000528653 MYL6BP14649 208 aa17.59■□□□□ 0.41
EIF3F-202ENST00000528653 CCDC30Q5VVM6 783 aa17.59■□□□□ 0.41
EIF3F-202ENST00000528653 PNPLA7Q6ZV29 1317 aa17.58■□□□□ 0.4
EIF3F-202ENST00000528653 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.58■□□□□ 0.4
EIF3F-202ENST00000528653 IL6STP40189 918 aaPredicted RBP17.58■□□□□ 0.4
EIF3F-202ENST00000528653 PDIA6Q15084 440 aa17.58■□□□□ 0.4
EIF3F-202ENST00000528653 STK31Q9BXU1 1019 aa17.58■□□□□ 0.4
EIF3F-202ENST00000528653 DDX21Q9NR30 783 aaKnown RBP eCLIP17.58■□□□□ 0.4
EIF3F-202ENST00000528653 CT47B1P0C2W7 299 aaPredicted RBP17.57■□□□□ 0.4
EIF3F-202ENST00000528653 SSFA2P28290 1259 aa17.57■□□□□ 0.4
EIF3F-202ENST00000528653 EIF5P55010 431 aaKnown RBP17.57■□□□□ 0.4
EIF3F-202ENST00000528653 CHMP4AQ9BY43 222 aa17.57■□□□□ 0.4
EIF3F-202ENST00000528653 DBF4Q9UBU7 674 aaPredicted RBP17.57■□□□□ 0.4
EIF3F-202ENST00000528653 SCN7AQ01118 1682 aa17.57■□□□□ 0.4
EIF3F-202ENST00000528653 CACNA1FO60840 1977 aa17.56■□□□□ 0.4
EIF3F-202ENST00000528653 BCORQ6W2J9 1755 aa17.56■□□□□ 0.4
EIF3F-202ENST00000528653 CASZ1Q86V15 1759 aa17.56■□□□□ 0.4
EIF3F-202ENST00000528653 ADRA2BP18089 450 aa17.55■□□□□ 0.4
EIF3F-202ENST00000528653 LRP10Q7Z4F1 713 aa17.55■□□□□ 0.4
EIF3F-202ENST00000528653 NPM2Q86SE8 214 aaKnown RBP17.55■□□□□ 0.4
EIF3F-202ENST00000528653 BCL2L13Q9BXK5 485 aa17.55■□□□□ 0.4
EIF3F-202ENST00000528653 MSH5O43196 834 aa17.54■□□□□ 0.4
EIF3F-202ENST00000528653 TRAPPC3LQ5T215 181 aa17.54■□□□□ 0.4
EIF3F-202ENST00000528653 COL23A1Q86Y22 540 aaPredicted RBP17.54■□□□□ 0.4
EIF3F-202ENST00000528653 ARXQ96QS3 562 aa17.54■□□□□ 0.4
EIF3F-202ENST00000528653 HYPKQ9NX55 129 aa17.54■□□□□ 0.4
EIF3F-202ENST00000528653 A0A087WZG4 1122 aa17.53■□□□□ 0.4
EIF3F-202ENST00000528653 SLC4A2P04920 1241 aa17.53■□□□□ 0.4
EIF3F-202ENST00000528653 FLAD1Q8NFF5 587 aa17.53■□□□□ 0.4
EIF3F-202ENST00000528653 XAGE3Q8WTP9 111 aa17.53■□□□□ 0.4
EIF3F-202ENST00000528653 SSH1Q8WYL5 1049 aa17.53■□□□□ 0.4
EIF3F-202ENST00000528653 ARHGEF1Q92888 912 aaKnown RBP17.53■□□□□ 0.4
EIF3F-202ENST00000528653 ZNF428Q96B54 188 aa17.53■□□□□ 0.4
EIF3F-202ENST00000528653 PHAXQ9H814 394 aaKnown RBP17.53■□□□□ 0.4
EIF3F-202ENST00000528653 SMC4Q9NTJ3 1288 aa17.53■□□□□ 0.4
EIF3F-202ENST00000528653 RFC4P35249 363 aa17.52■□□□□ 0.4
EIF3F-202ENST00000528653 RARSP54136 660 aaKnown RBP17.52■□□□□ 0.4
EIF3F-202ENST00000528653 AIMP1Q12904 312 aaKnown RBP17.52■□□□□ 0.4
EIF3F-202ENST00000528653 TTLL7Q6ZT98 887 aa17.52■□□□□ 0.4
EIF3F-202ENST00000528653 G2E3Q7L622 706 aa17.52■□□□□ 0.4
EIF3F-202ENST00000528653 DZIP3Q86Y13 1208 aaKnown RBP17.52■□□□□ 0.4
EIF3F-202ENST00000528653 PDGFDQ9GZP0 370 aaPredicted RBP17.52■□□□□ 0.4
EIF3F-202ENST00000528653 SRP68Q9UHB9 627 aaKnown RBP17.52■□□□□ 0.4
EIF3F-202ENST00000528653 TBC1D2BQ9UPU7 963 aa17.52■□□□□ 0.4
EIF3F-202ENST00000528653 USP42Q9H9J4 1324 aaKnown RBP17.51■□□□□ 0.39
EIF3F-202ENST00000528653 ALDH1L2Q3SY69 923 aa17.51■□□□□ 0.39
EIF3F-202ENST00000528653 KIF6Q6ZMV9 814 aa17.51■□□□□ 0.39
EIF3F-202ENST00000528653 COPS6Q7L5N1 327 aa17.51■□□□□ 0.39
EIF3F-202ENST00000528653 MRPL50Q8N5N7 158 aaKnown RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms