RNA–Protein interactions for RNA: ENST00000528439.5

RPS3-210, Transcript of ribosomal protein S3, humanhuman

TSL 3

Gene RPS3, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-210ENST00000528439 ONECUT3O60422 494 aaPredicted RBP12.82□□□□□ -0.36
RPS3-210ENST00000528439 ANXA1P04083 346 aa12.82□□□□□ -0.36
RPS3-210ENST00000528439 PRIM1P49642 420 aaKnown RBP12.82□□□□□ -0.36
RPS3-210ENST00000528439 MYT1Q01538 1121 aa12.82□□□□□ -0.36
RPS3-210ENST00000528439 B4GALNT3Q6L9W6 998 aa12.82□□□□□ -0.36
RPS3-210ENST00000528439 TMEM57Q8N5G2 664 aa12.82□□□□□ -0.36
RPS3-210ENST00000528439 ARHGAP45Q92619 1136 aa12.82□□□□□ -0.36
RPS3-210ENST00000528439 ACSBG1Q96GR2 724 aa12.82□□□□□ -0.36
RPS3-210ENST00000528439 FMNL2Q96PY5 1086 aa12.82□□□□□ -0.36
RPS3-210ENST00000528439 ATG3Q9NT62 314 aa12.82□□□□□ -0.36
RPS3-210ENST00000528439 IPO8O15397 1037 aaKnown RBP12.81□□□□□ -0.36
RPS3-210ENST00000528439 MVPQ14764 893 aaKnown RBP12.81□□□□□ -0.36
RPS3-210ENST00000528439 FTSJ3Q8IY81 847 aaKnown RBP12.81□□□□□ -0.36
RPS3-210ENST00000528439 STK31Q9BXU1 1019 aa12.81□□□□□ -0.36
RPS3-210ENST00000528439 PTPRCP08575 1304 aa12.81□□□□□ -0.36
RPS3-210ENST00000528439 CICQ96RK0 1608 aaPredicted RBP12.8□□□□□ -0.36
RPS3-210ENST00000528439 PTCD1O75127 700 aaKnown RBP12.8□□□□□ -0.36
RPS3-210ENST00000528439 SNRPA1P09661 255 aaKnown RBP12.8□□□□□ -0.36
RPS3-210ENST00000528439 FLIIQ13045 1269 aa12.8□□□□□ -0.36
RPS3-210ENST00000528439 PDIA6Q15084 440 aa12.8□□□□□ -0.36
RPS3-210ENST00000528439 FAM182BQ5T319 152 aa12.8□□□□□ -0.36
RPS3-210ENST00000528439 SEPT12Q8IYM1 358 aa12.8□□□□□ -0.36
RPS3-210ENST00000528439 SYTL4Q96C24 671 aaPredicted RBP12.8□□□□□ -0.36
RPS3-210ENST00000528439 SLC4A9Q96Q91 983 aa12.8□□□□□ -0.36
RPS3-210ENST00000528439 API5Q9BZZ5 524 aaKnown RBP12.8□□□□□ -0.36
RPS3-210ENST00000528439 PHAXQ9H814 394 aaKnown RBP12.8□□□□□ -0.36
RPS3-210ENST00000528439 USP16Q9Y5T5 823 aa12.8□□□□□ -0.36
RPS3-210ENST00000528439 BTAF1O14981 1849 aa12.8□□□□□ -0.36
RPS3-210ENST00000528439 SBF2Q86WG5 1849 aa12.8□□□□□ -0.36
RPS3-210ENST00000528439 KCNQ2O43526 872 aa12.79□□□□□ -0.36
RPS3-210ENST00000528439 PTF1AQ7RTS3 328 aa12.79□□□□□ -0.36
RPS3-210ENST00000528439 LRP10Q7Z4F1 713 aa12.79□□□□□ -0.36
RPS3-210ENST00000528439 PXDNLA1KZ92 1463 aa12.78□□□□□ -0.36
RPS3-210ENST00000528439 F6X3S4 739 aa12.78□□□□□ -0.36
RPS3-210ENST00000528439 PIP4K2AP48426 406 aaPredicted RBP12.78□□□□□ -0.36
RPS3-210ENST00000528439 ITPRIPQ8IWB1 547 aa12.78□□□□□ -0.36
RPS3-210ENST00000528439 ADCY9O60503 1353 aa12.78□□□□□ -0.36
RPS3-210ENST00000528439 MS4A1P11836 297 aa12.77□□□□□ -0.37
RPS3-210ENST00000528439 DBF4Q9UBU7 674 aaPredicted RBP12.77□□□□□ -0.37
RPS3-210ENST00000528439 KAT6BQ8WYB5 2073 aa12.77□□□□□ -0.37
RPS3-210ENST00000528439 RREB1Q92766 1687 aa12.77□□□□□ -0.37
RPS3-210ENST00000528439 NBPF26B4DH59 902 aa12.76□□□□□ -0.37
RPS3-210ENST00000528439 FKBP5Q13451 457 aaPredicted RBP12.76□□□□□ -0.37
RPS3-210ENST00000528439 NBPF14Q5TI25 921 aa12.76□□□□□ -0.37
RPS3-210ENST00000528439 NBPF10Q6P3W6 841 aaKnown RBP12.76□□□□□ -0.37
RPS3-210ENST00000528439 DNAJC10Q8IXB1 793 aa12.76□□□□□ -0.37
RPS3-210ENST00000528439 NBPF15Q8N660 670 aa12.76□□□□□ -0.37
RPS3-210ENST00000528439 DDX21Q9NR30 783 aaKnown RBP eCLIP12.76□□□□□ -0.375e-35■□□□□ 8.5
RPS3-210ENST00000528439 PALLDQ8WX93 1383 aa12.76□□□□□ -0.37
RPS3-210ENST00000528439 COL5A3P25940 1745 aaPredicted RBP12.76□□□□□ -0.37
RPS3-210ENST00000528439 NUP188Q5SRE5 1749 aa12.76□□□□□ -0.37
RPS3-210ENST00000528439 ZNF831Q5JPB2 1677 aa12.75□□□□□ -0.37
RPS3-210ENST00000528439 INTS3Q68E01 1043 aaKnown RBP12.75□□□□□ -0.37
RPS3-210ENST00000528439 CCDC136Q96JN2 1154 aa12.75□□□□□ -0.37
RPS3-210ENST00000528439 RBM42Q9BTD8 480 aaKnown RBP12.75□□□□□ -0.37
RPS3-210ENST00000528439 ARFGEF2Q9Y6D5 1785 aa12.75□□□□□ -0.37
RPS3-210ENST00000528439 MYL6BP14649 208 aa12.74□□□□□ -0.37
RPS3-210ENST00000528439 KRT27Q7Z3Y8 459 aa12.74□□□□□ -0.37
RPS3-210ENST00000528439 VSIG10Q8N0Z9 540 aa12.74□□□□□ -0.37
RPS3-210ENST00000528439 HYPKQ9NX55 129 aa12.74□□□□□ -0.37
RPS3-210ENST00000528439 DDX19BQ9UMR2 479 aa12.74□□□□□ -0.37
RPS3-210ENST00000528439 PCDHB15Q9Y5E8 787 aa12.74□□□□□ -0.37
RPS3-210ENST00000528439 ERBB4Q15303 1308 aa12.73□□□□□ -0.37
RPS3-210ENST00000528439 KDM2BQ8NHM5 1336 aa12.73□□□□□ -0.37
RPS3-210ENST00000528439 ZBTB7BO15156 539 aaPredicted RBP12.73□□□□□ -0.37
RPS3-210ENST00000528439 A1BGP04217 495 aa12.73□□□□□ -0.37
RPS3-210ENST00000528439 XAGE3Q8WTP9 111 aa12.73□□□□□ -0.37
RPS3-210ENST00000528439 CHMP4AQ9BY43 222 aa12.73□□□□□ -0.37
RPS3-210ENST00000528439 ZBTB40Q9NUA8 1239 aa12.73□□□□□ -0.37
RPS3-210ENST00000528439 LY75O60449 1722 aa12.73□□□□□ -0.37
RPS3-210ENST00000528439 ATP10DQ9P241 1426 aa12.72□□□□□ -0.37
RPS3-210ENST00000528439 PI4KAP2A4QPH2 592 aa12.72□□□□□ -0.37
RPS3-210ENST00000528439 CYP19A1P11511 503 aaPredicted RBP12.72□□□□□ -0.37
RPS3-210ENST00000528439 ITPK1Q13572 414 aa12.72□□□□□ -0.37
RPS3-210ENST00000528439 SLC4A10Q6U841 1118 aa12.72□□□□□ -0.37
RPS3-210ENST00000528439 PI4KAP1Q8N8J0 262 aa12.72□□□□□ -0.37
RPS3-210ENST00000528439 LOC102724428A0A0B4J2F2 783 aa12.71□□□□□ -0.37
RPS3-210ENST00000528439 SIK1P57059 783 aa12.71□□□□□ -0.37
RPS3-210ENST00000528439 AIMP1Q12904 312 aaKnown RBP12.71□□□□□ -0.37
RPS3-210ENST00000528439 ILDR2Q71H61 639 aa12.71□□□□□ -0.37
RPS3-210ENST00000528439 COPS6Q7L5N1 327 aa12.71□□□□□ -0.37
RPS3-210ENST00000528439 DNAAF4Q8WXU2 420 aa12.71□□□□□ -0.37
RPS3-210ENST00000528439 MEIS3Q99687 375 aa12.71□□□□□ -0.37
RPS3-210ENST00000528439 C1orf115Q9H7X2 142 aa12.71□□□□□ -0.37
RPS3-210ENST00000528439 MYH14Q7Z406 1995 aaKnown RBP12.7□□□□□ -0.38
RPS3-210ENST00000528439 IGHDP01880 384 aa12.7□□□□□ -0.38
RPS3-210ENST00000528439 CCT4P50991 539 aaKnown RBP12.7□□□□□ -0.38
RPS3-210ENST00000528439 BEND3Q5T5X7 828 aa12.7□□□□□ -0.38
RPS3-210ENST00000528439 KSR2Q6VAB6 950 aa12.7□□□□□ -0.38
RPS3-210ENST00000528439 TTLL7Q6ZT98 887 aa12.7□□□□□ -0.38
RPS3-210ENST00000528439 ZBTB1Q9Y2K1 713 aa12.7□□□□□ -0.38
RPS3-210ENST00000528439 MAP3K2Q9Y2U5 619 aa12.7□□□□□ -0.38
RPS3-210ENST00000528439 AAMPQ13685 434 aa12.69□□□□□ -0.38
RPS3-210ENST00000528439 SMARCC1Q92922 1105 aaPredicted RBP12.69□□□□□ -0.38
RPS3-210ENST00000528439 TAF1LQ8IZX4 1826 aa12.68□□□□□ -0.38
RPS3-210ENST00000528439 ATP6V1AP38606 617 aa12.68□□□□□ -0.38
RPS3-210ENST00000528439 KCNQ4P56696 695 aa12.68□□□□□ -0.38
RPS3-210ENST00000528439 FAM196AQ6ZSG2 479 aa12.68□□□□□ -0.38
RPS3-210ENST00000528439 TEX13AQ9BXU3 409 aaPredicted RBP12.68□□□□□ -0.38
RPS3-210ENST00000528439 TNS1Q9HBL0 1735 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms