RNA–Protein interactions for RNA: ENST00000528036.5

PKP3-206, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-206ENST00000528036 COL15A1P39059 1388 aa30.74■■■□□ 2.51
PKP3-206ENST00000528036 VIRMAQ69YN4 1812 aaKnown RBP30.73■■■□□ 2.51
PKP3-206ENST00000528036 NPM2Q86SE8 214 aaKnown RBP30.73■■■□□ 2.51
PKP3-206ENST00000528036 TM4SF1P30408 202 aa30.72■■■□□ 2.51
PKP3-206ENST00000528036 USPL1Q5W0Q7 1092 aa30.72■■■□□ 2.51
PKP3-206ENST00000528036 C4AP0C0L4 1744 aa30.72■■■□□ 2.51
PKP3-206ENST00000528036 UBR2Q8IWV8 1755 aa30.71■■■□□ 2.51
PKP3-206ENST00000528036 CANXP27824 592 aaKnown RBP30.7■■■□□ 2.51
PKP3-206ENST00000528036 EIF5P55010 431 aaKnown RBP30.7■■■□□ 2.51
PKP3-206ENST00000528036 PXDNLA1KZ92 1463 aa30.7■■■□□ 2.5
PKP3-206ENST00000528036 IL6STP40189 918 aaPredicted RBP30.68■■■□□ 2.5
PKP3-206ENST00000528036 KIF13BQ9NQT8 1826 aa30.68■■■□□ 2.5
PKP3-206ENST00000528036 POLRMTO00411 1230 aaKnown RBP30.67■■■□□ 2.5
PKP3-206ENST00000528036 A0A0G2JLW4 131 aa30.66■■■□□ 2.5
PKP3-206ENST00000528036 DDR1Q08345 913 aa30.66■■■□□ 2.5
PKP3-206ENST00000528036 MCM10Q7L590 875 aa30.66■■■□□ 2.5
PKP3-206ENST00000528036 PNISRQ8TF01 805 aaKnown RBP30.66■■■□□ 2.5
PKP3-206ENST00000528036 SIPA1L3O60292 1781 aaPredicted RBP30.65■■■□□ 2.5
PKP3-206ENST00000528036 SNRPA1P09661 255 aaKnown RBP30.65■■■□□ 2.5
PKP3-206ENST00000528036 TAF7Q15545 349 aaPredicted RBP30.65■■■□□ 2.5
PKP3-206ENST00000528036 DPEP1P16444 411 aa30.64■■■□□ 2.5
PKP3-206ENST00000528036 GOLGB1Q14789 3259 aaKnown RBP30.64■■■□□ 2.5
PKP3-206ENST00000528036 MAPK8IP3Q9UPT6 1336 aa30.64■■■□□ 2.5
PKP3-206ENST00000528036 DDX10Q13206 875 aaKnown RBP30.63■■■□□ 2.49
PKP3-206ENST00000528036 PIM2Q9P1W9 311 aa30.63■■■□□ 2.49
PKP3-206ENST00000528036 NFIXQ14938 502 aa30.62■■■□□ 2.49
PKP3-206ENST00000528036 PLEKHF1Q96S99 279 aa30.62■■■□□ 2.49
PKP3-206ENST00000528036 BCS1LQ9Y276 419 aa30.62■■■□□ 2.49
PKP3-206ENST00000528036 NFE2L2Q16236 605 aa30.61■■■□□ 2.49
PKP3-206ENST00000528036 KCNQ3O43525 872 aa30.59■■■□□ 2.49
PKP3-206ENST00000528036 BCL2L12Q9HB09 334 aa30.59■■■□□ 2.49
PKP3-206ENST00000528036 MYBBP1AQ9BQG0 1328 aaKnown RBP30.58■■■□□ 2.49
PKP3-206ENST00000528036 DCTN1Q14203 1278 aa30.58■■■□□ 2.49
PKP3-206ENST00000528036 WWC3Q9ULE0 1092 aa30.58■■■□□ 2.49
PKP3-206ENST00000528036 PDZRN3Q9UPQ7 1066 aa30.58■■■□□ 2.49
PKP3-206ENST00000528036 GIGYF1O75420 1035 aaPredicted RBP30.57■■■□□ 2.48
PKP3-206ENST00000528036 A1BGP04217 495 aa30.57■■■□□ 2.48
PKP3-206ENST00000528036 SERPINB2P05120 415 aa30.57■■■□□ 2.48
PKP3-206ENST00000528036 DALRD3Q5D0E6 543 aaKnown RBP30.57■■■□□ 2.48
PKP3-206ENST00000528036 KCNA3P22001 575 aa30.56■■■□□ 2.48
PKP3-206ENST00000528036 USP16Q9Y5T5 823 aa30.56■■■□□ 2.48
PKP3-206ENST00000528036 RGL2O15211 777 aa30.55■■■□□ 2.48
PKP3-206ENST00000528036 ZNF330Q9Y3S2 320 aaPredicted RBP30.55■■■□□ 2.48
PKP3-206ENST00000528036 ADCY9O60503 1353 aa30.54■■■□□ 2.48
PKP3-206ENST00000528036 ARHGAP27Q6ZUM4 889 aa30.53■■■□□ 2.48
PKP3-206ENST00000528036 ATP10DQ9P241 1426 aa30.53■■■□□ 2.48
PKP3-206ENST00000528036 KIAA1551Q9HCM1 1747 aa30.53■■■□□ 2.48
PKP3-206ENST00000528036 LMOD3Q0VAK6 560 aa30.52■■■□□ 2.48
PKP3-206ENST00000528036 CLEC4GQ6UXB4 293 aa30.52■■■□□ 2.48
PKP3-206ENST00000528036 TBC1D2BQ9UPU7 963 aa30.52■■■□□ 2.48
PKP3-206ENST00000528036 ZEB1P37275 1124 aaPredicted RBP30.51■■■□□ 2.47
PKP3-206ENST00000528036 C1QTNF8P60827 252 aa30.51■■■□□ 2.47
PKP3-206ENST00000528036 DZIP3Q86Y13 1208 aaKnown RBP30.51■■■□□ 2.47
PKP3-206ENST00000528036 GPBP1L1Q9HC44 474 aaPredicted RBP30.51■■■□□ 2.47
PKP3-206ENST00000528036 ZNF652Q9Y2D9 606 aa30.51■■■□□ 2.47
PKP3-206ENST00000528036 SETDB2Q96T68 719 aa30.5■■■□□ 2.47
PKP3-206ENST00000528036 N4BP2Q86UW6 1770 aaPredicted RBP30.5■■■□□ 2.47
PKP3-206ENST00000528036 CARMIL3Q8ND23 1372 aa30.5■■■□□ 2.47
PKP3-206ENST00000528036 CAMTA2O94983 1202 aa30.49■■■□□ 2.47
PKP3-206ENST00000528036 TBC1D9BQ66K14 1250 aa30.48■■■□□ 2.47
PKP3-206ENST00000528036 BICDL1Q6ZP65 573 aa30.48■■■□□ 2.47
PKP3-206ENST00000528036 BABAM1Q9NWV8 329 aa30.48■■■□□ 2.47
PKP3-206ENST00000528036 H0YIN7 160 aa30.47■■■□□ 2.47
PKP3-206ENST00000528036 CHRNA5P30532 468 aa30.47■■■□□ 2.47
PKP3-206ENST00000528036 PDE6BP35913 854 aa30.46■■■□□ 2.47
PKP3-206ENST00000528036 BRIP1Q9BX63 1249 aa30.46■■■□□ 2.47
PKP3-206ENST00000528036 NRXN2Q9P2S2 1712 aa30.46■■■□□ 2.47
PKP3-206ENST00000528036 RIPK4P57078 832 aa30.45■■■□□ 2.47
PKP3-206ENST00000528036 WDR43Q15061 677 aaKnown RBP eCLIP30.45■■■□□ 2.47
PKP3-206ENST00000528036 TTLL6Q8N841 843 aa30.44■■■□□ 2.46
PKP3-206ENST00000528036 MIS18AQ9NYP9 233 aa30.44■■■□□ 2.46
PKP3-206ENST00000528036 PRAMEF22A3QJZ6 481 aa30.43■■■□□ 2.46
PKP3-206ENST00000528036 NPHP1O15259 732 aa30.43■■■□□ 2.46
PKP3-206ENST00000528036 EIF4A1P60842 406 aaKnown RBP30.43■■■□□ 2.46
PKP3-206ENST00000528036 C2CD5Q86YS7 1000 aa30.43■■■□□ 2.46
PKP3-206ENST00000528036 SCN7AQ01118 1682 aa30.42■■■□□ 2.46
PKP3-206ENST00000528036 BRCA1P38398 1863 aaKnown RBP30.42■■■□□ 2.46
PKP3-206ENST00000528036 TMPOP42166 694 aaKnown RBP30.41■■■□□ 2.46
PKP3-206ENST00000528036 ST5P78524 1137 aa30.41■■■□□ 2.46
PKP3-206ENST00000528036 CNBD1Q8NA66 436 aa30.41■■■□□ 2.46
PKP3-206ENST00000528036 PRR5LQ6MZQ0 368 aa30.4■■■□□ 2.46
PKP3-206ENST00000528036 ARFGEF1Q9Y6D6 1849 aa30.39■■■□□ 2.46
PKP3-206ENST00000528036 NBPF26B4DH59 902 aa30.39■■■□□ 2.46
PKP3-206ENST00000528036 NBPF10Q6P3W6 841 aaKnown RBP30.39■■■□□ 2.46
PKP3-206ENST00000528036 NBPF15Q8N660 670 aa30.39■■■□□ 2.46
PKP3-206ENST00000528036 PRKRIP1Q9H875 184 aaPredicted RBP30.39■■■□□ 2.46
PKP3-206ENST00000528036 ERBB4Q15303 1308 aa30.39■■■□□ 2.46
PKP3-206ENST00000528036 AFDNP55196 1824 aaKnown RBP30.38■■■□□ 2.45
PKP3-206ENST00000528036 RUNDC1Q96C34 613 aa30.38■■■□□ 2.45
PKP3-206ENST00000528036 TSPYL4Q9UJ04 414 aa30.38■■■□□ 2.45
PKP3-206ENST00000528036 THUMPD2Q9BTF0 503 aaKnown RBP30.37■■■□□ 2.45
PKP3-206ENST00000528036 DLG5Q8TDM6 1919 aa30.36■■■□□ 2.45
PKP3-206ENST00000528036 PIP4K2AP48426 406 aaPredicted RBP30.36■■■□□ 2.45
PKP3-206ENST00000528036 ERVV-1B6SEH8 477 aa30.35■■■□□ 2.45
PKP3-206ENST00000528036 C9orf131Q5VYM1 1079 aa30.35■■■□□ 2.45
PKP3-206ENST00000528036 TPTE2Q6XPS3 522 aa30.35■■■□□ 2.45
PKP3-206ENST00000528036 NBPF5PQ86XG9 351 aaPredicted RBP30.35■■■□□ 2.45
PKP3-206ENST00000528036 ZNF526Q8TF50 670 aaPredicted RBP30.35■■■□□ 2.45
PKP3-206ENST00000528036 ZC3H4Q9UPT8 1303 aaKnown RBP30.33■■■□□ 2.45
PKP3-206ENST00000528036 CNKSR1Q969H4 720 aa30.33■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 147.7 ms