RNA–Protein interactions for RNA: ENST00000527823.5

USP48-212, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-212ENST00000527823 PTGDRQ13258 359 aa11.77□□□□□ -0.53
USP48-212ENST00000527823 ARHGEF25Q86VW2 580 aa11.77□□□□□ -0.53
USP48-212ENST00000527823 BCL2L12Q9HB09 334 aa11.77□□□□□ -0.53
USP48-212ENST00000527823 NPDC1Q9NQX5 325 aaPredicted RBP11.77□□□□□ -0.53
USP48-212ENST00000527823 CENPJQ9HC77 1338 aaPredicted RBP11.77□□□□□ -0.53
USP48-212ENST00000527823 POTEB3A0JP26 581 aa11.75□□□□□ -0.53
USP48-212ENST00000527823 GPR162Q16538 588 aa11.75□□□□□ -0.53
USP48-212ENST00000527823 NBPF1Q3BBV0 1214 aa11.75□□□□□ -0.53
USP48-212ENST00000527823 POTEBQ6S5H4 581 aa11.75□□□□□ -0.53
USP48-212ENST00000527823 ACSBG1Q96GR2 724 aa11.75□□□□□ -0.53
USP48-212ENST00000527823 LRRC4BQ9NT99 713 aa11.75□□□□□ -0.53
USP48-212ENST00000527823 CABP1Q9NZU7 370 aa11.75□□□□□ -0.53
USP48-212ENST00000527823 ATP10DQ9P241 1426 aa11.75□□□□□ -0.53
USP48-212ENST00000527823 C5P01031 1676 aa11.75□□□□□ -0.53
USP48-212ENST00000527823 CSB-PGBD3P0DP91 1061 aa11.74□□□□□ -0.53
USP48-212ENST00000527823 NLGN2Q8NFZ4 835 aa11.74□□□□□ -0.53
USP48-212ENST00000527823 HS3ST6Q96QI5 342 aa11.74□□□□□ -0.53
USP48-212ENST00000527823 PNPLA7Q6ZV29 1317 aa11.74□□□□□ -0.53
USP48-212ENST00000527823 EXOC5O00471 708 aa11.73□□□□□ -0.53
USP48-212ENST00000527823 ADCY9O60503 1353 aa11.73□□□□□ -0.53
USP48-212ENST00000527823 RGPD2P0DJD1 1756 aa11.73□□□□□ -0.53
USP48-212ENST00000527823 FECHP22830 423 aa11.73□□□□□ -0.53
USP48-212ENST00000527823 PTPREP23469 700 aa11.73□□□□□ -0.53
USP48-212ENST00000527823 TAF1LQ8IZX4 1826 aa11.73□□□□□ -0.53
USP48-212ENST00000527823 KCNK17Q96T54 332 aa11.73□□□□□ -0.53
USP48-212ENST00000527823 TOGARAM1Q9Y4F4 1720 aa11.73□□□□□ -0.53
USP48-212ENST00000527823 TTC21BQ7Z4L5 1316 aa11.72□□□□□ -0.53
USP48-212ENST00000527823 GNPATO15228 680 aa11.72□□□□□ -0.53
USP48-212ENST00000527823 YBX3P16989 372 aaKnown RBP eCLIP11.72□□□□□ -0.531e-13■□□□□ 10.6
USP48-212ENST00000527823 COL9A1P20849 921 aa11.72□□□□□ -0.53
USP48-212ENST00000527823 HIC1Q14526 733 aa11.72□□□□□ -0.53
USP48-212ENST00000527823 NSD2O96028 1365 aa11.71□□□□□ -0.53
USP48-212ENST00000527823 KRI1Q8N9T8 703 aaKnown RBP11.71□□□□□ -0.53
USP48-212ENST00000527823 KCNH5Q8NCM2 988 aa11.71□□□□□ -0.53
USP48-212ENST00000527823 SLC24A3Q9HC58 644 aa11.71□□□□□ -0.53
USP48-212ENST00000527823 CD163L1Q9NR16 1453 aa11.7□□□□□ -0.54
USP48-212ENST00000527823 TTC21AQ8NDW8 1320 aa11.7□□□□□ -0.54
USP48-212ENST00000527823 PSEN2P49810 448 aa11.7□□□□□ -0.54
USP48-212ENST00000527823 POTEEQ6S8J3 1075 aa11.7□□□□□ -0.54
USP48-212ENST00000527823 CICQ96RK0 1608 aaPredicted RBP11.69□□□□□ -0.54
USP48-212ENST00000527823 POLD1P28340 1107 aa11.69□□□□□ -0.54
USP48-212ENST00000527823 ZNF687Q8N1G0 1237 aa11.69□□□□□ -0.54
USP48-212ENST00000527823 IL2RBP14784 551 aa11.68□□□□□ -0.54
USP48-212ENST00000527823 SLC16A10Q8TF71 515 aa11.68□□□□□ -0.54
USP48-212ENST00000527823 USP31Q70CQ4 1352 aa11.67□□□□□ -0.54
USP48-212ENST00000527823 PPP1R3GB7ZBB8 358 aa11.67□□□□□ -0.54
USP48-212ENST00000527823 KTN1Q86UP2 1357 aaKnown RBP11.67□□□□□ -0.54
USP48-212ENST00000527823 KIAA1551Q9HCM1 1747 aa11.66□□□□□ -0.54
USP48-212ENST00000527823 MEGF6O75095 1541 aa11.66□□□□□ -0.54
USP48-212ENST00000527823 EVC2Q86UK5 1308 aa11.66□□□□□ -0.54
USP48-212ENST00000527823 UBR3Q6ZT12 1888 aa11.66□□□□□ -0.54
USP48-212ENST00000527823 ARHGAP33O14559 1287 aa11.66□□□□□ -0.54
USP48-212ENST00000527823 KCNQ4P56696 695 aa11.66□□□□□ -0.54
USP48-212ENST00000527823 SLC27A3Q5K4L6 730 aa11.66□□□□□ -0.54
USP48-212ENST00000527823 ANKRD36BQ8N2N9 1353 aa11.66□□□□□ -0.54
USP48-212ENST00000527823 SBNO2Q9Y2G9 1366 aa11.66□□□□□ -0.54
USP48-212ENST00000527823 PADI6Q6TGC4 694 aa11.65□□□□□ -0.54
USP48-212ENST00000527823 CDCA7LQ96GN5 454 aa11.65□□□□□ -0.54
USP48-212ENST00000527823 NLRP2Q9NX02 1062 aa11.65□□□□□ -0.54
USP48-212ENST00000527823 C4BP0C0L5 1744 aa11.64□□□□□ -0.55
USP48-212ENST00000527823 WDR90Q96KV7 1748 aa11.64□□□□□ -0.55
USP48-212ENST00000527823 HSPA6P17066 643 aa11.64□□□□□ -0.55
USP48-212ENST00000527823 PRSS12P56730 875 aa11.64□□□□□ -0.55
USP48-212ENST00000527823 MAP2K5Q13163 448 aa11.64□□□□□ -0.55
USP48-212ENST00000527823 DMRTA1Q5VZB9 504 aa11.64□□□□□ -0.55
USP48-212ENST00000527823 PROX2Q3B8N5 592 aa11.63□□□□□ -0.55
USP48-212ENST00000527823 ANKRD24Q8TF21 1146 aa11.63□□□□□ -0.55
USP48-212ENST00000527823 TFCP2L1Q9NZI6 479 aa11.63□□□□□ -0.55
USP48-212ENST00000527823 ITGB4P16144 1822 aa11.63□□□□□ -0.55
USP48-212ENST00000527823 KIF13BQ9NQT8 1826 aa11.63□□□□□ -0.55
USP48-212ENST00000527823 IRF6O14896 467 aa11.62□□□□□ -0.55
USP48-212ENST00000527823 GRIN3BO60391 1043 aa11.62□□□□□ -0.55
USP48-212ENST00000527823 PBX2P40425 430 aa11.62□□□□□ -0.55
USP48-212ENST00000527823 FAM161AQ3B820 660 aa11.62□□□□□ -0.55
USP48-212ENST00000527823 MSL1Q68DK7 614 aa11.62□□□□□ -0.55
USP48-212ENST00000527823 NME9Q86XW9 330 aa11.62□□□□□ -0.55
USP48-212ENST00000527823 GPBP1L1Q9HC44 474 aaPredicted RBP11.62□□□□□ -0.55
USP48-212ENST00000527823 ZNF526Q8TF50 670 aaPredicted RBP11.61□□□□□ -0.55
USP48-212ENST00000527823 FAM198AQ9UFP1 575 aa11.61□□□□□ -0.55
USP48-212ENST00000527823 EDC4Q6P2E9 1401 aaKnown RBP11.6□□□□□ -0.55
USP48-212ENST00000527823 MAP2P11137 1827 aaKnown RBP11.6□□□□□ -0.55
USP48-212ENST00000527823 BRCA1P38398 1863 aaKnown RBP11.6□□□□□ -0.55
USP48-212ENST00000527823 COL23A1Q86Y22 540 aaPredicted RBP11.6□□□□□ -0.55
USP48-212ENST00000527823 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.6□□□□□ -0.55
USP48-212ENST00000527823 CCDC102AQ96A19 550 aa11.6□□□□□ -0.55
USP48-212ENST00000527823 AK7Q96M32 723 aa11.6□□□□□ -0.55
USP48-212ENST00000527823 ZBED2Q9BTP6 218 aa11.6□□□□□ -0.55
USP48-212ENST00000527823 TSKSQ9UJT2 592 aa11.6□□□□□ -0.55
USP48-212ENST00000527823 PKD1L3Q7Z443 1732 aa11.6□□□□□ -0.55
USP48-212ENST00000527823 A0A1W2PP64 1363 aa11.59□□□□□ -0.55
USP48-212ENST00000527823 TTC13Q8NBP0 860 aa11.59□□□□□ -0.55
USP48-212ENST00000527823 SYTL4Q96C24 671 aaPredicted RBP11.59□□□□□ -0.55
USP48-212ENST00000527823 RBM27Q9P2N5 1060 aaKnown RBP11.59□□□□□ -0.55
USP48-212ENST00000527823 CCNL1Q9UK58 526 aaPredicted RBP11.59□□□□□ -0.55
USP48-212ENST00000527823 ROCK2O75116 1388 aaKnown RBP11.58□□□□□ -0.56
USP48-212ENST00000527823 TRIM6-TRIM34B2RNG4 842 aa11.58□□□□□ -0.56
USP48-212ENST00000527823 DDX54Q8TDD1 881 aaKnown RBP11.58□□□□□ -0.56
USP48-212ENST00000527823 N4BP2Q86UW6 1770 aaPredicted RBP11.58□□□□□ -0.56
USP48-212ENST00000527823 PCNTO95613 3336 aa11.58□□□□□ -0.56
USP48-212ENST00000527823 POTEGQ6S5H5 508 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms