RNA–Protein interactions for RNA: ENST00000527446.5

RPS3-209, Transcript of ribosomal protein S3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RPS3, Length 1,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-209ENST00000527446 RREB1Q92766 1687 aa16.49■□□□□ 0.23
RPS3-209ENST00000527446 LAMB4A4D0S4 1761 aa16.48■□□□□ 0.23
RPS3-209ENST00000527446 INTS5Q6P9B9 1019 aaKnown RBP16.47■□□□□ 0.23
RPS3-209ENST00000527446 STARD3NLO95772 234 aa16.46■□□□□ 0.23
RPS3-209ENST00000527446 A1BGP04217 495 aa16.46■□□□□ 0.23
RPS3-209ENST00000527446 PDIA6Q15084 440 aa16.46■□□□□ 0.23
RPS3-209ENST00000527446 NBPF26B4DH59 902 aa16.45■□□□□ 0.22
RPS3-209ENST00000527446 CT47B1P0C2W7 299 aaPredicted RBP16.45■□□□□ 0.22
RPS3-209ENST00000527446 EIF2S2P20042 333 aaKnown RBP16.45■□□□□ 0.22
RPS3-209ENST00000527446 CRKLP46109 303 aaKnown RBP16.45■□□□□ 0.22
RPS3-209ENST00000527446 RC3H1Q5TC82 1133 aaKnown RBP16.45■□□□□ 0.22
RPS3-209ENST00000527446 NBPF14Q5TI25 921 aa16.45■□□□□ 0.22
RPS3-209ENST00000527446 NBPF10Q6P3W6 841 aaKnown RBP16.45■□□□□ 0.22
RPS3-209ENST00000527446 NBPF15Q8N660 670 aa16.45■□□□□ 0.22
RPS3-209ENST00000527446 CNTNAP4Q9C0A0 1308 aa16.45■□□□□ 0.22
RPS3-209ENST00000527446 C4BP0C0L5 1744 aa16.45■□□□□ 0.22
RPS3-209ENST00000527446 NUP188Q5SRE5 1749 aa16.45■□□□□ 0.22
RPS3-209ENST00000527446 HDGFL1Q5TGJ6 251 aa16.45■□□□□ 0.22
RPS3-209ENST00000527446 LRP10Q7Z4F1 713 aa16.45■□□□□ 0.22
RPS3-209ENST00000527446 AKT1S1Q96B36 256 aa16.45■□□□□ 0.22
RPS3-209ENST00000527446 PROSER3Q2NL68 480 aa16.44■□□□□ 0.22
RPS3-209ENST00000527446 AMIGO3Q86WK7 504 aa16.44■□□□□ 0.22
RPS3-209ENST00000527446 NECTIN2Q92692 538 aa16.44■□□□□ 0.22
RPS3-209ENST00000527446 CCDC87Q9NVE4 849 aa16.44■□□□□ 0.22
RPS3-209ENST00000527446 ERBB4Q15303 1308 aa16.43■□□□□ 0.22
RPS3-209ENST00000527446 PIP4K2AP48426 406 aaPredicted RBP16.43■□□□□ 0.22
RPS3-209ENST00000527446 ZNF827Q17R98 1081 aa16.43■□□□□ 0.22
RPS3-209ENST00000527446 ZNF428Q96B54 188 aa16.43■□□□□ 0.22
RPS3-209ENST00000527446 ANO8Q9HCE9 1232 aaPredicted RBP16.43■□□□□ 0.22
RPS3-209ENST00000527446 ZBTB1Q9Y2K1 713 aa16.43■□□□□ 0.22
RPS3-209ENST00000527446 TCERG1O14776 1098 aaKnown RBP16.42■□□□□ 0.22
RPS3-209ENST00000527446 HMGB2P26583 209 aaKnown RBP16.42■□□□□ 0.22
RPS3-209ENST00000527446 CCDC30Q5VVM6 783 aa16.42■□□□□ 0.22
RPS3-209ENST00000527446 SSH1Q8WYL5 1049 aa16.42■□□□□ 0.22
RPS3-209ENST00000527446 DDX21Q9NR30 783 aaKnown RBP eCLIP16.42■□□□□ 0.225e-35■□□□□ 8.5
RPS3-209ENST00000527446 CHPF2Q9P2E5 772 aa16.42■□□□□ 0.22
RPS3-209ENST00000527446 RPS6KA4O75676 772 aa16.41■□□□□ 0.22
RPS3-209ENST00000527446 ANXA1P04083 346 aa16.41■□□□□ 0.22
RPS3-209ENST00000527446 RARSP54136 660 aaKnown RBP16.41■□□□□ 0.22
RPS3-209ENST00000527446 EIF5P55010 431 aaKnown RBP16.41■□□□□ 0.22
RPS3-209ENST00000527446 CHMP4AQ9BY43 222 aa16.41■□□□□ 0.22
RPS3-209ENST00000527446 DBF4Q9UBU7 674 aaPredicted RBP16.41■□□□□ 0.22
RPS3-209ENST00000527446 CACNA1FO60840 1977 aa16.41■□□□□ 0.22
RPS3-209ENST00000527446 UBR3Q6ZT12 1888 aa16.4■□□□□ 0.22
RPS3-209ENST00000527446 SOCS7O14512 581 aa16.4■□□□□ 0.22
RPS3-209ENST00000527446 CANXP27824 592 aaKnown RBP16.4■□□□□ 0.22
RPS3-209ENST00000527446 SMIM5Q71RC9 77 aa16.4■□□□□ 0.22
RPS3-209ENST00000527446 GNPATO15228 680 aa16.39■□□□□ 0.21
RPS3-209ENST00000527446 IL6STP40189 918 aaPredicted RBP16.39■□□□□ 0.21
RPS3-209ENST00000527446 ALDH1L2Q3SY69 923 aa16.39■□□□□ 0.21
RPS3-209ENST00000527446 MRPL50Q8N5N7 158 aaKnown RBP16.39■□□□□ 0.21
RPS3-209ENST00000527446 SLC4A2P04920 1241 aa16.38■□□□□ 0.21
RPS3-209ENST00000527446 MYL6BP14649 208 aa16.38■□□□□ 0.21
RPS3-209ENST00000527446 BRPF1P55201 1214 aaPredicted RBP16.38■□□□□ 0.21
RPS3-209ENST00000527446 SLC15A2Q16348 729 aa16.38■□□□□ 0.21
RPS3-209ENST00000527446 G2E3Q7L622 706 aa16.38■□□□□ 0.21
RPS3-209ENST00000527446 AK7Q96M32 723 aa16.38■□□□□ 0.21
RPS3-209ENST00000527446 HYPKQ9NX55 129 aa16.38■□□□□ 0.21
RPS3-209ENST00000527446 TUBGCP6Q96RT7 1819 aa16.38■□□□□ 0.21
RPS3-209ENST00000527446 STK31Q9BXU1 1019 aa16.37■□□□□ 0.21
RPS3-209ENST00000527446 PHAXQ9H814 394 aaKnown RBP16.37■□□□□ 0.21
RPS3-209ENST00000527446 BCAR3O75815 825 aa16.36■□□□□ 0.21
RPS3-209ENST00000527446 BCL2L13Q9BXK5 485 aa16.36■□□□□ 0.21
RPS3-209ENST00000527446 STK32BQ9NY57 414 aa16.36■□□□□ 0.21
RPS3-209ENST00000527446 RCAN3Q9UKA8 241 aa16.36■□□□□ 0.21
RPS3-209ENST00000527446 RTCBQ9Y3I0 505 aaKnown RBP16.36■□□□□ 0.21
RPS3-209ENST00000527446 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.35■□□□□ 0.21
RPS3-209ENST00000527446 ADRA2BP18089 450 aa16.35■□□□□ 0.21
RPS3-209ENST00000527446 SSFA2P28290 1259 aa16.35■□□□□ 0.21
RPS3-209ENST00000527446 COPS6Q7L5N1 327 aa16.35■□□□□ 0.21
RPS3-209ENST00000527446 XAGE3Q8WTP9 111 aa16.35■□□□□ 0.21
RPS3-209ENST00000527446 ARHGEF1Q92888 912 aaKnown RBP16.35■□□□□ 0.21
RPS3-209ENST00000527446 TFCP2L1Q9NZI6 479 aa16.35■□□□□ 0.21
RPS3-209ENST00000527446 QSER1Q2KHR3 1735 aa16.34■□□□□ 0.21
RPS3-209ENST00000527446 PNPLA7Q6ZV29 1317 aa16.34■□□□□ 0.21
RPS3-209ENST00000527446 TTLL7Q6ZT98 887 aa16.34■□□□□ 0.21
RPS3-209ENST00000527446 SMC4Q9NTJ3 1288 aa16.34■□□□□ 0.21
RPS3-209ENST00000527446 COL15A1P39059 1388 aa16.34■□□□□ 0.21
RPS3-209ENST00000527446 FLIIQ13045 1269 aa16.33■□□□□ 0.2
RPS3-209ENST00000527446 TRAPPC3LQ5T215 181 aa16.33■□□□□ 0.2
RPS3-209ENST00000527446 COL23A1Q86Y22 540 aaPredicted RBP16.33■□□□□ 0.2
RPS3-209ENST00000527446 A0A087WZG4 1122 aa16.32■□□□□ 0.2
RPS3-209ENST00000527446 PHF14O94880 888 aa16.32■□□□□ 0.2
RPS3-209ENST00000527446 TBC1D2BQ9UPU7 963 aa16.32■□□□□ 0.2
RPS3-209ENST00000527446 ZNF330Q9Y3S2 320 aaPredicted RBP16.32■□□□□ 0.2
RPS3-209ENST00000527446 C4AP0C0L4 1744 aa16.32■□□□□ 0.2
RPS3-209ENST00000527446 CAMTA2O94983 1202 aa16.31■□□□□ 0.2
RPS3-209ENST00000527446 AIMP1Q12904 312 aaKnown RBP16.31■□□□□ 0.2
RPS3-209ENST00000527446 DZIP3Q86Y13 1208 aaKnown RBP16.31■□□□□ 0.2
RPS3-209ENST00000527446 FLAD1Q8NFF5 587 aa16.31■□□□□ 0.2
RPS3-209ENST00000527446 PDGFDQ9GZP0 370 aaPredicted RBP16.31■□□□□ 0.2
RPS3-209ENST00000527446 NARFQ9UHQ1 456 aa16.31■□□□□ 0.2
RPS3-209ENST00000527446 ADCY9O60503 1353 aa16.3■□□□□ 0.2
RPS3-209ENST00000527446 BCL2L12Q9HB09 334 aa16.3■□□□□ 0.2
RPS3-209ENST00000527446 SRP68Q9UHB9 627 aaKnown RBP16.3■□□□□ 0.2
RPS3-209ENST00000527446 NOB1Q9ULX3 412 aaKnown RBP16.3■□□□□ 0.2
RPS3-209ENST00000527446 MAP3K15Q6ZN16 1313 aa16.3■□□□□ 0.2
RPS3-209ENST00000527446 USP42Q9H9J4 1324 aaKnown RBP16.3■□□□□ 0.2
RPS3-209ENST00000527446 ERVV-1B6SEH8 477 aa16.29■□□□□ 0.2
RPS3-209ENST00000527446 ANKRD13DQ6ZTN6 518 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms