RNA–Protein interactions for RNA: ENST00000527133.2

CLNS1A-207, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3

Gene CLNS1A, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-207ENST00000527133 VEGFAP15692 232 aaPredicted RBP17.81■□□□□ 0.44
CLNS1A-207ENST00000527133 PRELPP51888 382 aa17.81■□□□□ 0.44
CLNS1A-207ENST00000527133 SCN11AQ9UI33 1791 aa17.81■□□□□ 0.44
CLNS1A-207ENST00000527133 AFDNP55196 1824 aaKnown RBP17.8■□□□□ 0.44
CLNS1A-207ENST00000527133 CYP19A1P11511 503 aaPredicted RBP17.8■□□□□ 0.44
CLNS1A-207ENST00000527133 MORC1Q86VD1 984 aa17.8■□□□□ 0.44
CLNS1A-207ENST00000527133 SLC52A2Q9HAB3 445 aa17.8■□□□□ 0.44
CLNS1A-207ENST00000527133 HSPA1AP0DMV8 641 aaKnown RBP17.79■□□□□ 0.44
CLNS1A-207ENST00000527133 HSPA1BP0DMV9 641 aaKnown RBP17.79■□□□□ 0.44
CLNS1A-207ENST00000527133 AKAP4Q5JQC9 854 aa17.79■□□□□ 0.44
CLNS1A-207ENST00000527133 TTLL6Q8N841 843 aa17.79■□□□□ 0.44
CLNS1A-207ENST00000527133 NARFQ9UHQ1 456 aa17.79■□□□□ 0.44
CLNS1A-207ENST00000527133 COL15A1P39059 1388 aa17.79■□□□□ 0.44
CLNS1A-207ENST00000527133 SERPINB2P05120 415 aa17.78■□□□□ 0.44
CLNS1A-207ENST00000527133 SLC39A6Q13433 755 aa17.78■□□□□ 0.44
CLNS1A-207ENST00000527133 C2CD5Q86YS7 1000 aa17.78■□□□□ 0.44
CLNS1A-207ENST00000527133 LGR6Q9HBX8 967 aa17.78■□□□□ 0.44
CLNS1A-207ENST00000527133 ZBTB1Q9Y2K1 713 aa17.78■□□□□ 0.44
CLNS1A-207ENST00000527133 TIAM2Q8IVF5 1701 aa17.78■□□□□ 0.44
CLNS1A-207ENST00000527133 DLEC1Q9Y238 1755 aa17.77■□□□□ 0.44
CLNS1A-207ENST00000527133 IL13P35225 146 aa17.77■□□□□ 0.44
CLNS1A-207ENST00000527133 BCL2L12Q9HB09 334 aa17.77■□□□□ 0.44
CLNS1A-207ENST00000527133 NRXN2Q9P2S2 1712 aa17.77■□□□□ 0.44
CLNS1A-207ENST00000527133 H0YIN7 160 aa17.76■□□□□ 0.43
CLNS1A-207ENST00000527133 NFKBIEO00221 500 aa17.76■□□□□ 0.43
CLNS1A-207ENST00000527133 CARMIL3Q8ND23 1372 aa17.76■□□□□ 0.43
CLNS1A-207ENST00000527133 MRC1P22897 1456 aa17.75■□□□□ 0.43
CLNS1A-207ENST00000527133 RNMTO43148 476 aaKnown RBP17.74■□□□□ 0.43
CLNS1A-207ENST00000527133 BICDL1Q6ZP65 573 aa17.74■□□□□ 0.43
CLNS1A-207ENST00000527133 TIMELESSQ9UNS1 1208 aa17.74■□□□□ 0.43
CLNS1A-207ENST00000527133 CCDC88AQ3V6T2 1871 aa17.73■□□□□ 0.43
CLNS1A-207ENST00000527133 CANXP27824 592 aaKnown RBP17.73■□□□□ 0.43
CLNS1A-207ENST00000527133 POTECB2RU33 542 aa17.72■□□□□ 0.43
CLNS1A-207ENST00000527133 HSPA5P11021 654 aaKnown RBP17.72■□□□□ 0.43
CLNS1A-207ENST00000527133 DPY19L2Q6NUT2 758 aa17.72■□□□□ 0.43
CLNS1A-207ENST00000527133 ZNF219Q9P2Y4 722 aaPredicted RBP17.72■□□□□ 0.43
CLNS1A-207ENST00000527133 HMOX1P09601 288 aa17.71■□□□□ 0.43
CLNS1A-207ENST00000527133 EIF4G2P78344 907 aaKnown RBP eCLIP17.71■□□□□ 0.43
CLNS1A-207ENST00000527133 ZNF622Q969S3 477 aaKnown RBP eCLIP17.71■□□□□ 0.431e-13■■□□□ 12.4
CLNS1A-207ENST00000527133 C21orf2O43822 256 aa17.7■□□□□ 0.42
CLNS1A-207ENST00000527133 ERFEQ4G0M1 354 aa17.7■□□□□ 0.42
CLNS1A-207ENST00000527133 VSIG10Q8N0Z9 540 aa17.7■□□□□ 0.42
CLNS1A-207ENST00000527133 KNSTRNQ9Y448 316 aa17.7■□□□□ 0.42
CLNS1A-207ENST00000527133 MTHFSDQ2M296 383 aaKnown RBP17.69■□□□□ 0.42
CLNS1A-207ENST00000527133 TBC1D9BQ66K14 1250 aa17.69■□□□□ 0.42
CLNS1A-207ENST00000527133 CCDC24Q8N4L8 307 aa17.69■□□□□ 0.42
CLNS1A-207ENST00000527133 VIRMAQ69YN4 1812 aaKnown RBP17.69■□□□□ 0.42
CLNS1A-207ENST00000527133 STARD3NLO95772 234 aa17.68■□□□□ 0.42
CLNS1A-207ENST00000527133 EIF5P55010 431 aaKnown RBP17.68■□□□□ 0.42
CLNS1A-207ENST00000527133 MKRN1Q9UHC7 482 aaKnown RBP17.68■□□□□ 0.42
CLNS1A-207ENST00000527133 ANKRD31Q8N7Z5 1873 aa17.67■□□□□ 0.42
CLNS1A-207ENST00000527133 A0A087WZG4 1122 aa17.67■□□□□ 0.42
CLNS1A-207ENST00000527133 PDE6BP35913 854 aa17.67■□□□□ 0.42
CLNS1A-207ENST00000527133 TTC5Q8N0Z6 440 aa17.67■□□□□ 0.42
CLNS1A-207ENST00000527133 BRIP1Q9BX63 1249 aa17.67■□□□□ 0.42
CLNS1A-207ENST00000527133 ZNF330Q9Y3S2 320 aaPredicted RBP17.67■□□□□ 0.42
CLNS1A-207ENST00000527133 UBR2Q8IWV8 1755 aa17.66■□□□□ 0.42
CLNS1A-207ENST00000527133 TRIM26Q12899 539 aaPredicted RBP17.66■□□□□ 0.42
CLNS1A-207ENST00000527133 PRR5LQ6MZQ0 368 aa17.66■□□□□ 0.42
CLNS1A-207ENST00000527133 CHADLQ6NUI6 762 aa17.66■□□□□ 0.42
CLNS1A-207ENST00000527133 CREBZFQ9NS37 354 aa17.66■□□□□ 0.42
CLNS1A-207ENST00000527133 PDZRN3Q9UPQ7 1066 aa17.66■□□□□ 0.42
CLNS1A-207ENST00000527133 COL11A2P13942 1736 aaPredicted RBP17.66■□□□□ 0.42
CLNS1A-207ENST00000527133 POTEIP0CG38 1075 aa17.65■□□□□ 0.42
CLNS1A-207ENST00000527133 POTEJP0CG39 1038 aa17.65■□□□□ 0.42
CLNS1A-207ENST00000527133 TAOK3Q9H2K8 898 aa17.65■□□□□ 0.42
CLNS1A-207ENST00000527133 TBC1D2BQ9UPU7 963 aa17.65■□□□□ 0.42
CLNS1A-207ENST00000527133 FER1L6Q2WGJ9 1857 aa17.65■□□□□ 0.42
CLNS1A-207ENST00000527133 DICER1Q9UPY3 1922 aaKnown RBP17.64■□□□□ 0.42
CLNS1A-207ENST00000527133 DDNO94850 711 aaPredicted RBP17.64■□□□□ 0.41
CLNS1A-207ENST00000527133 AMER1Q5JTC6 1135 aaPredicted RBP17.64■□□□□ 0.41
CLNS1A-207ENST00000527133 SCN7AQ01118 1682 aa17.64■□□□□ 0.41
CLNS1A-207ENST00000527133 NPHP1O15259 732 aa17.63■□□□□ 0.41
CLNS1A-207ENST00000527133 ZNF496Q96IT1 587 aaPredicted RBP17.63■□□□□ 0.41
CLNS1A-207ENST00000527133 LTBP3Q9NS15 1303 aa17.63■□□□□ 0.41
CLNS1A-207ENST00000527133 CNBD1Q8NA66 436 aa17.62■□□□□ 0.41
CLNS1A-207ENST00000527133 HEG1Q9ULI3 1381 aa17.62■□□□□ 0.41
CLNS1A-207ENST00000527133 DIAPH1O60610 1272 aaKnown RBP17.61■□□□□ 0.41
CLNS1A-207ENST00000527133 PRPF40BQ6NWY9 871 aaKnown RBP17.61■□□□□ 0.41
CLNS1A-207ENST00000527133 CNKSR1Q969H4 720 aa17.61■□□□□ 0.41
CLNS1A-207ENST00000527133 SETDB2Q96T68 719 aa17.61■□□□□ 0.41
CLNS1A-207ENST00000527133 FOXN1O15353 648 aa17.6■□□□□ 0.41
CLNS1A-207ENST00000527133 IL6STP40189 918 aaPredicted RBP17.6■□□□□ 0.41
CLNS1A-207ENST00000527133 ST5P78524 1137 aa17.6■□□□□ 0.41
CLNS1A-207ENST00000527133 TEFQ10587 303 aa17.6■□□□□ 0.41
CLNS1A-207ENST00000527133 STYK1Q6J9G0 422 aa17.6■□□□□ 0.41
CLNS1A-207ENST00000527133 ZNF790Q6PG37 636 aa17.6■□□□□ 0.41
CLNS1A-207ENST00000527133 TEX13AQ9BXU3 409 aaPredicted RBP17.6■□□□□ 0.41
CLNS1A-207ENST00000527133 CNTNAP1P78357 1384 aa17.6■□□□□ 0.41
CLNS1A-207ENST00000527133 SLX4Q8IY92 1834 aa17.6■□□□□ 0.41
CLNS1A-207ENST00000527133 CACNA1SQ13698 1873 aa17.59■□□□□ 0.41
CLNS1A-207ENST00000527133 CLSPNQ9HAW4 1339 aa17.59■□□□□ 0.41
CLNS1A-207ENST00000527133 A1BGP04217 495 aa17.59■□□□□ 0.41
CLNS1A-207ENST00000527133 SRGNP10124 158 aa17.59■□□□□ 0.41
CLNS1A-207ENST00000527133 NPM2Q86SE8 214 aaKnown RBP17.59■□□□□ 0.41
CLNS1A-207ENST00000527133 PCGF6Q9BYE7 350 aa17.59■□□□□ 0.41
CLNS1A-207ENST00000527133 IQCA1LA6NCM1 817 aa17.58■□□□□ 0.4
CLNS1A-207ENST00000527133 CAMTA2O94983 1202 aa17.58■□□□□ 0.4
CLNS1A-207ENST00000527133 SOGA3Q5TF21 947 aa17.58■□□□□ 0.4
CLNS1A-207ENST00000527133 LDHDQ86WU2 507 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms