RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 CHADLQ6NUI6 762 aa15.02■□□□□ -0
NEDD8-204ENST00000526430 SLC4A9Q96Q91 983 aa15.02■□□□□ -0
NEDD8-204ENST00000526430 WBP1LQ9NX94 342 aa15.02■□□□□ -0
NEDD8-204ENST00000526430 USP42Q9H9J4 1324 aaKnown RBP15.01□□□□□ -0.01
NEDD8-204ENST00000526430 THSD7BQ9C0I4 1608 aa15.01□□□□□ -0.01
NEDD8-204ENST00000526430 LBX1P52954 281 aa15□□□□□ -0.01
NEDD8-204ENST00000526430 DPY19L2Q6NUT2 758 aa15□□□□□ -0.01
NEDD8-204ENST00000526430 PASKQ96RG2 1323 aa14.99□□□□□ -0.01
NEDD8-204ENST00000526430 PER1O15534 1290 aaPredicted RBP14.99□□□□□ -0.01
NEDD8-204ENST00000526430 IFNL2Q8IZJ0 200 aa14.99□□□□□ -0.01
NEDD8-204ENST00000526430 CACNA1SQ13698 1873 aa14.98□□□□□ -0.01
NEDD8-204ENST00000526430 ANKRD31Q8N7Z5 1873 aa14.98□□□□□ -0.01
NEDD8-204ENST00000526430 POLRMTO00411 1230 aaKnown RBP14.98□□□□□ -0.01
NEDD8-204ENST00000526430 FYB1O15117 783 aa14.98□□□□□ -0.01
NEDD8-204ENST00000526430 PHKG2P15735 406 aa14.98□□□□□ -0.01
NEDD8-204ENST00000526430 FKBP8Q14318 412 aa14.98□□□□□ -0.01
NEDD8-204ENST00000526430 ADAMTSL1Q8N6G6 1762 aa14.98□□□□□ -0.01
NEDD8-204ENST00000526430 ARFGEF2Q9Y6D5 1785 aa14.98□□□□□ -0.01
NEDD8-204ENST00000526430 HSPA8P11142 646 aaKnown RBP14.97□□□□□ -0.01
NEDD8-204ENST00000526430 TM4SF1P30408 202 aa14.97□□□□□ -0.01
NEDD8-204ENST00000526430 VEGFBP49765 207 aa14.97□□□□□ -0.01
NEDD8-204ENST00000526430 POLR3GLQ9BT43 218 aa14.97□□□□□ -0.01
NEDD8-204ENST00000526430 PANK3Q9H999 370 aa14.97□□□□□ -0.01
NEDD8-204ENST00000526430 NFKBIEO00221 500 aa14.96□□□□□ -0.01
NEDD8-204ENST00000526430 RBM42Q9BTD8 480 aaKnown RBP14.96□□□□□ -0.01
NEDD8-204ENST00000526430 SRP68Q9UHB9 627 aaKnown RBP14.96□□□□□ -0.01
NEDD8-204ENST00000526430 ERVV-2B6SEH9 535 aa14.95□□□□□ -0.02
NEDD8-204ENST00000526430 TTLL6Q8N841 843 aa14.95□□□□□ -0.02
NEDD8-204ENST00000526430 GGNBP2Q9H3C7 697 aa14.95□□□□□ -0.02
NEDD8-204ENST00000526430 COL11A2P13942 1736 aaPredicted RBP14.95□□□□□ -0.02
NEDD8-204ENST00000526430 TMEM88BA6NKF7 163 aa14.94□□□□□ -0.02
NEDD8-204ENST00000526430 POTEIP0CG38 1075 aa14.93□□□□□ -0.02
NEDD8-204ENST00000526430 POTEJP0CG39 1038 aa14.93□□□□□ -0.02
NEDD8-204ENST00000526430 CRKLP46109 303 aaKnown RBP14.93□□□□□ -0.02
NEDD8-204ENST00000526430 SCN11AQ9UI33 1791 aa14.93□□□□□ -0.02
NEDD8-204ENST00000526430 TRPM7Q96QT4 1865 aa14.93□□□□□ -0.02
NEDD8-204ENST00000526430 CCDC85CA6NKD9 419 aa14.92□□□□□ -0.02
NEDD8-204ENST00000526430 MAP2K1Q02750 393 aaPredicted RBP14.92□□□□□ -0.02
NEDD8-204ENST00000526430 LDHDQ86WU2 507 aa14.92□□□□□ -0.02
NEDD8-204ENST00000526430 LTBP3Q9NS15 1303 aa14.92□□□□□ -0.02
NEDD8-204ENST00000526430 ZNF316A6NFI3 1004 aaPredicted RBP14.91□□□□□ -0.02
NEDD8-204ENST00000526430 RASSF10A6NK89 507 aa14.91□□□□□ -0.02
NEDD8-204ENST00000526430 ERFEQ4G0M1 354 aa14.91□□□□□ -0.02
NEDD8-204ENST00000526430 IQCA1LA6NCM1 817 aa14.9□□□□□ -0.02
NEDD8-204ENST00000526430 ITGBL1O95965 494 aaPredicted RBP14.9□□□□□ -0.02
NEDD8-204ENST00000526430 EYA1Q99502 592 aa14.9□□□□□ -0.02
NEDD8-204ENST00000526430 CASP8AP2Q9UKL3 1982 aa14.9□□□□□ -0.02
NEDD8-204ENST00000526430 SLX4Q8IY92 1834 aa14.89□□□□□ -0.03
NEDD8-204ENST00000526430 HSP90AB1P08238 724 aaKnown RBP14.89□□□□□ -0.03
NEDD8-204ENST00000526430 AMER1Q5JTC6 1135 aaPredicted RBP14.89□□□□□ -0.03
NEDD8-204ENST00000526430 L3MBTL3Q96JM7 780 aaPredicted RBP14.89□□□□□ -0.03
NEDD8-204ENST00000526430 EMILIN1Q9Y6C2 1016 aa14.89□□□□□ -0.03
NEDD8-204ENST00000526430 ZPR1O75312 459 aa14.88□□□□□ -0.03
NEDD8-204ENST00000526430 LTBP1Q14766 1721 aa14.88□□□□□ -0.03
NEDD8-204ENST00000526430 H0YIN7 160 aa14.87□□□□□ -0.03
NEDD8-204ENST00000526430 DDNO94850 711 aaPredicted RBP14.87□□□□□ -0.03
NEDD8-204ENST00000526430 NFIXQ14938 502 aa14.87□□□□□ -0.03
NEDD8-204ENST00000526430 DEFB115Q30KQ5 88 aa14.87□□□□□ -0.03
NEDD8-204ENST00000526430 USPL1Q5W0Q7 1092 aa14.87□□□□□ -0.03
NEDD8-204ENST00000526430 C2CD5Q86YS7 1000 aa14.87□□□□□ -0.03
NEDD8-204ENST00000526430 WDR33Q9C0J8 1336 aaKnown RBP14.87□□□□□ -0.03
NEDD8-204ENST00000526430 DDX10Q13206 875 aaKnown RBP14.86□□□□□ -0.03
NEDD8-204ENST00000526430 INTS5Q6P9B9 1019 aaKnown RBP14.86□□□□□ -0.03
NEDD8-204ENST00000526430 TAF1DQ9H5J8 278 aaPredicted RBP14.86□□□□□ -0.03
NEDD8-204ENST00000526430 CARMIL3Q8ND23 1372 aa14.85□□□□□ -0.03
NEDD8-204ENST00000526430 SCN7AQ01118 1682 aa14.85□□□□□ -0.03
NEDD8-204ENST00000526430 PTCD1O75127 700 aaKnown RBP14.85□□□□□ -0.03
NEDD8-204ENST00000526430 PDZRN3Q9UPQ7 1066 aa14.85□□□□□ -0.03
NEDD8-204ENST00000526430 SOS1Q07889 1333 aaPredicted RBP14.85□□□□□ -0.03
NEDD8-204ENST00000526430 SERPINB2P05120 415 aa14.84□□□□□ -0.03
NEDD8-204ENST00000526430 CABP4P57796 275 aa14.84□□□□□ -0.03
NEDD8-204ENST00000526430 TAOK3Q9H2K8 898 aa14.84□□□□□ -0.03
NEDD8-204ENST00000526430 NARFQ9UHQ1 456 aa14.84□□□□□ -0.03
NEDD8-204ENST00000526430 COL15A1P39059 1388 aa14.83□□□□□ -0.04
NEDD8-204ENST00000526430 C21orf2O43822 256 aa14.82□□□□□ -0.04
NEDD8-204ENST00000526430 BEGAINQ9BUH8 593 aa14.82□□□□□ -0.04
NEDD8-204ENST00000526430 UBR2Q8IWV8 1755 aa14.82□□□□□ -0.04
NEDD8-204ENST00000526430 PPM1GO15355 546 aaPredicted RBP14.81□□□□□ -0.04
NEDD8-204ENST00000526430 KNSTRNQ9Y448 316 aa14.81□□□□□ -0.04
NEDD8-204ENST00000526430 NPC1L1Q9UHC9 1359 aa14.81□□□□□ -0.04
NEDD8-204ENST00000526430 SOGA3Q5TF21 947 aa14.8□□□□□ -0.04
NEDD8-204ENST00000526430 BCL2L12Q9HB09 334 aa14.8□□□□□ -0.04
NEDD8-204ENST00000526430 PDE6BP35913 854 aa14.79□□□□□ -0.04
NEDD8-204ENST00000526430 ECE1P42892 770 aa14.79□□□□□ -0.04
NEDD8-204ENST00000526430 PLEKHO1Q53GL0 409 aaPredicted RBP14.79□□□□□ -0.04
NEDD8-204ENST00000526430 PNMA8AQ86V59 439 aaPredicted RBP14.79□□□□□ -0.04
NEDD8-204ENST00000526430 BRIP1Q9BX63 1249 aa14.79□□□□□ -0.04
NEDD8-204ENST00000526430 HACL1Q9UJ83 578 aa14.79□□□□□ -0.04
NEDD8-204ENST00000526430 ABT1Q9ULW3 272 aaKnown RBP14.79□□□□□ -0.04
NEDD8-204ENST00000526430 AMOTQ4VCS5 1084 aa14.78□□□□□ -0.04
NEDD8-204ENST00000526430 EAPPQ56P03 285 aaPredicted RBP14.78□□□□□ -0.04
NEDD8-204ENST00000526430 ZNF530Q6P9A1 599 aaPredicted RBP14.78□□□□□ -0.04
NEDD8-204ENST00000526430 CNTROBQ8N137 903 aa14.78□□□□□ -0.04
NEDD8-204ENST00000526430 NFATC2IPQ8NCF5 419 aa14.78□□□□□ -0.04
NEDD8-204ENST00000526430 ZNF622Q969S3 477 aaKnown RBP eCLIP14.78□□□□□ -0.041e-16■□□□□ 9.9
NEDD8-204ENST00000526430 MCOLN1Q9GZU1 580 aa14.78□□□□□ -0.04
NEDD8-204ENST00000526430 BCORQ6W2J9 1755 aa14.78□□□□□ -0.04
NEDD8-204ENST00000526430 MRC1P22897 1456 aa14.77□□□□□ -0.04
NEDD8-204ENST00000526430 CA12O43570 354 aa14.77□□□□□ -0.05
NEDD8-204ENST00000526430 CYP19A1P11511 503 aaPredicted RBP14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms