RNA–Protein interactions for RNA: ENST00000526009.5

CLNS1A-205, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3

Gene CLNS1A, Length 747 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-205ENST00000526009 HSPA6P17066 643 aa10.64□□□□□ -0.71
CLNS1A-205ENST00000526009 NME9Q86XW9 330 aa10.64□□□□□ -0.71
CLNS1A-205ENST00000526009 PCDH10Q9P2E7 1040 aa10.64□□□□□ -0.71
CLNS1A-205ENST00000526009 ATP10DQ9P241 1426 aa10.64□□□□□ -0.71
CLNS1A-205ENST00000526009 COL23A1Q86Y22 540 aaPredicted RBP10.63□□□□□ -0.71
CLNS1A-205ENST00000526009 ZNF454Q8N9F8 522 aa10.63□□□□□ -0.71
CLNS1A-205ENST00000526009 CCNL1Q9UK58 526 aaPredicted RBP10.63□□□□□ -0.71
CLNS1A-205ENST00000526009 QSER1Q2KHR3 1735 aa10.63□□□□□ -0.71
CLNS1A-205ENST00000526009 ANKRD36BQ8N2N9 1353 aa10.63□□□□□ -0.71
CLNS1A-205ENST00000526009 COL24A1Q17RW2 1714 aa10.62□□□□□ -0.71
CLNS1A-205ENST00000526009 ZNF526Q8TF50 670 aaPredicted RBP10.62□□□□□ -0.71
CLNS1A-205ENST00000526009 L3MBTL2Q969R5 705 aa10.62□□□□□ -0.71
CLNS1A-205ENST00000526009 CD2APQ9Y5K6 639 aa10.62□□□□□ -0.71
CLNS1A-205ENST00000526009 FAM205CA6NFA0 338 aa10.61□□□□□ -0.71
CLNS1A-205ENST00000526009 MSL1Q68DK7 614 aa10.61□□□□□ -0.71
CLNS1A-205ENST00000526009 IP6K1Q92551 441 aa10.61□□□□□ -0.71
CLNS1A-205ENST00000526009 LTV1Q96GA3 475 aaPredicted RBP10.61□□□□□ -0.71
CLNS1A-205ENST00000526009 PHF14O94880 888 aa10.6□□□□□ -0.71
CLNS1A-205ENST00000526009 HMGB2P26583 209 aaKnown RBP10.6□□□□□ -0.71
CLNS1A-205ENST00000526009 HDGFL2Q7Z4V5 671 aaPredicted RBP10.6□□□□□ -0.71
CLNS1A-205ENST00000526009 ZCRB1Q8TBF4 217 aaKnown RBP10.6□□□□□ -0.71
CLNS1A-205ENST00000526009 TMC1Q8TDI8 760 aa10.6□□□□□ -0.71
CLNS1A-205ENST00000526009 PCDHGA10Q9Y5H3 936 aa10.6□□□□□ -0.71
CLNS1A-205ENST00000526009 ROCK2O75116 1388 aaKnown RBP10.6□□□□□ -0.71
CLNS1A-205ENST00000526009 SBNO2Q9Y2G9 1366 aa10.6□□□□□ -0.71
CLNS1A-205ENST00000526009 FOSBP53539 338 aa10.59□□□□□ -0.71
CLNS1A-205ENST00000526009 VARS2Q5ST30 1063 aaKnown RBP10.59□□□□□ -0.71
CLNS1A-205ENST00000526009 FLAD1Q8NFF5 587 aa10.59□□□□□ -0.71
CLNS1A-205ENST00000526009 NSD2O96028 1365 aa10.59□□□□□ -0.71
CLNS1A-205ENST00000526009 USP47Q96K76 1375 aa10.59□□□□□ -0.71
CLNS1A-205ENST00000526009 ADCY9O60503 1353 aa10.58□□□□□ -0.72
CLNS1A-205ENST00000526009 PPP4R3BQ5MIZ7 849 aa10.58□□□□□ -0.72
CLNS1A-205ENST00000526009 EPAS1Q99814 870 aa10.58□□□□□ -0.72
CLNS1A-205ENST00000526009 SLC12A5Q9H2X9 1139 aa10.58□□□□□ -0.72
CLNS1A-205ENST00000526009 LTN1O94822 1766 aa10.57□□□□□ -0.72
CLNS1A-205ENST00000526009 TUBGCP6Q96RT7 1819 aa10.57□□□□□ -0.72
CLNS1A-205ENST00000526009 TYW1BQ6NUM6 668 aa10.57□□□□□ -0.72
CLNS1A-205ENST00000526009 ZDHHC16Q969W1 377 aa10.57□□□□□ -0.72
CLNS1A-205ENST00000526009 TERF2IPQ9NYB0 399 aa10.57□□□□□ -0.72
CLNS1A-205ENST00000526009 MON2Q7Z3U7 1717 aa10.57□□□□□ -0.72
CLNS1A-205ENST00000526009 CD163L1Q9NR16 1453 aa10.56□□□□□ -0.72
CLNS1A-205ENST00000526009 LY75O60449 1722 aa10.56□□□□□ -0.72
CLNS1A-205ENST00000526009 OSBPP22059 807 aa10.56□□□□□ -0.72
CLNS1A-205ENST00000526009 AMPHP49418 695 aa10.56□□□□□ -0.72
CLNS1A-205ENST00000526009 RBM26Q5T8P6 1007 aaKnown RBP10.56□□□□□ -0.72
CLNS1A-205ENST00000526009 EDC4Q6P2E9 1401 aaKnown RBP10.56□□□□□ -0.72
CLNS1A-205ENST00000526009 USP54Q70EL1 1684 aa10.56□□□□□ -0.72
CLNS1A-205ENST00000526009 HOXC9P31274 260 aa10.55□□□□□ -0.72
CLNS1A-205ENST00000526009 WWC3Q9ULE0 1092 aa10.55□□□□□ -0.72
CLNS1A-205ENST00000526009 IGSF1Q8N6C5 1336 aa10.55□□□□□ -0.72
CLNS1A-205ENST00000526009 MAP3K7O43318 606 aa10.54□□□□□ -0.72
CLNS1A-205ENST00000526009 APLP1P51693 650 aa10.54□□□□□ -0.72
CLNS1A-205ENST00000526009 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.54□□□□□ -0.72
CLNS1A-205ENST00000526009 FBXW7Q969H0 707 aa10.54□□□□□ -0.72
CLNS1A-205ENST00000526009 COG3Q96JB2 828 aa10.54□□□□□ -0.72
CLNS1A-205ENST00000526009 CGNL1Q0VF96 1302 aa10.54□□□□□ -0.72
CLNS1A-205ENST00000526009 MAP3K19Q56UN5 1328 aa10.54□□□□□ -0.72
CLNS1A-205ENST00000526009 A0A1W2PP64 1363 aa10.53□□□□□ -0.72
CLNS1A-205ENST00000526009 DOT1LQ8TEK3 1739 aa10.53□□□□□ -0.72
CLNS1A-205ENST00000526009 FBLN1P23142 703 aa10.53□□□□□ -0.72
CLNS1A-205ENST00000526009 MPRIPQ6WCQ1 1025 aa10.53□□□□□ -0.72
CLNS1A-205ENST00000526009 RAPGEF4Q8WZA2 1011 aa10.53□□□□□ -0.72
CLNS1A-205ENST00000526009 HS3ST6Q96QI5 342 aa10.53□□□□□ -0.72
CLNS1A-205ENST00000526009 SIN3AQ96ST3 1273 aa10.53□□□□□ -0.72
CLNS1A-205ENST00000526009 FAM208AQ9UK61 1670 aaKnown RBP10.53□□□□□ -0.72
CLNS1A-205ENST00000526009 MEGF6O75095 1541 aa10.53□□□□□ -0.72
CLNS1A-205ENST00000526009 PALLDQ8WX93 1383 aa10.52□□□□□ -0.72
CLNS1A-205ENST00000526009 TOMM70O94826 608 aa10.52□□□□□ -0.73
CLNS1A-205ENST00000526009 NEUROD1Q13562 356 aa10.52□□□□□ -0.73
CLNS1A-205ENST00000526009 NBPF6Q5VWK0 638 aa10.52□□□□□ -0.73
CLNS1A-205ENST00000526009 DNAJC5GQ8N7S2 189 aa10.52□□□□□ -0.73
CLNS1A-205ENST00000526009 AK7Q96M32 723 aa10.52□□□□□ -0.73
CLNS1A-205ENST00000526009 NBPF4Q96M43 638 aa10.52□□□□□ -0.73
CLNS1A-205ENST00000526009 CARD11Q9BXL7 1154 aa10.52□□□□□ -0.73
CLNS1A-205ENST00000526009 ADAM33Q9BZ11 813 aa10.52□□□□□ -0.73
CLNS1A-205ENST00000526009 TATP17735 454 aaPredicted RBP10.51□□□□□ -0.73
CLNS1A-205ENST00000526009 CDAN1Q8IWY9 1227 aa10.51□□□□□ -0.73
CLNS1A-205ENST00000526009 SMARCC1Q92922 1105 aaPredicted RBP10.51□□□□□ -0.73
CLNS1A-205ENST00000526009 PUS7Q96PZ0 661 aaKnown RBP10.51□□□□□ -0.73
CLNS1A-205ENST00000526009 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.5□□□□□ -0.73
CLNS1A-205ENST00000526009 POTEB3A0JP26 581 aa10.5□□□□□ -0.73
CLNS1A-205ENST00000526009 POTEBQ6S5H4 581 aa10.5□□□□□ -0.73
CLNS1A-205ENST00000526009 AMIGO3Q86WK7 504 aa10.5□□□□□ -0.73
CLNS1A-205ENST00000526009 USHBP1Q8N6Y0 703 aa10.5□□□□□ -0.73
CLNS1A-205ENST00000526009 PCDH11XQ9BZA7 1347 aa10.5□□□□□ -0.73
CLNS1A-205ENST00000526009 PCDH11YQ9BZA8 1340 aa10.5□□□□□ -0.73
CLNS1A-205ENST00000526009 SSFA2P28290 1259 aa10.49□□□□□ -0.73
CLNS1A-205ENST00000526009 RRS1Q15050 365 aaKnown RBP10.49□□□□□ -0.73
CLNS1A-205ENST00000526009 SMIM5Q71RC9 77 aa10.49□□□□□ -0.73
CLNS1A-205ENST00000526009 C5P01031 1676 aa10.49□□□□□ -0.73
CLNS1A-205ENST00000526009 NSD3Q9BZ95 1437 aa10.49□□□□□ -0.73
CLNS1A-205ENST00000526009 TSR1Q2NL82 804 aaKnown RBP10.48□□□□□ -0.73
CLNS1A-205ENST00000526009 C6orf132Q5T0Z8 1188 aa10.48□□□□□ -0.73
CLNS1A-205ENST00000526009 SMG6Q86US8 1419 aaKnown RBP10.48□□□□□ -0.73
CLNS1A-205ENST00000526009 CYP27B1O15528 508 aa10.47□□□□□ -0.73
CLNS1A-205ENST00000526009 GPIHBP1Q8IV16 184 aa10.47□□□□□ -0.73
CLNS1A-205ENST00000526009 ZNF687Q8N1G0 1237 aa10.47□□□□□ -0.73
CLNS1A-205ENST00000526009 KCNK17Q96T54 332 aa10.47□□□□□ -0.73
CLNS1A-205ENST00000526009 BCL2L12Q9HB09 334 aa10.47□□□□□ -0.73
CLNS1A-205ENST00000526009 RTL1A6NKG5 1358 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms