RNA–Protein interactions for RNA: ENST00000525670.5

SVIP-202, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-202ENST00000525670 MSX1P28360 303 aa8.71□□□□□ -1.02
SVIP-202ENST00000525670 RASSF7Q02833 373 aa8.71□□□□□ -1.02
SVIP-202ENST00000525670 PGBD3Q8N328 593 aa8.71□□□□□ -1.02
SVIP-202ENST00000525670 POM121Q96HA1 1249 aa8.71□□□□□ -1.02
SVIP-202ENST00000525670 NSFL1CQ9UNZ2 370 aaKnown RBP8.71□□□□□ -1.02
SVIP-202ENST00000525670 MAGI1Q96QZ7 1491 aaPredicted RBP8.7□□□□□ -1.02
SVIP-202ENST00000525670 PIK3CDO00329 1044 aa8.7□□□□□ -1.02
SVIP-202ENST00000525670 LZTS3O60299 673 aaPredicted RBP8.7□□□□□ -1.02
SVIP-202ENST00000525670 SMTNP53814 917 aa8.7□□□□□ -1.02
SVIP-202ENST00000525670 TMEM151AQ8N4L1 468 aa8.7□□□□□ -1.02
SVIP-202ENST00000525670 NFATC2IPQ8NCF5 419 aa8.7□□□□□ -1.02
SVIP-202ENST00000525670 BCRP11274 1271 aa8.69□□□□□ -1.02
SVIP-202ENST00000525670 SCARF2Q96GP6 870 aaPredicted RBP8.69□□□□□ -1.02
SVIP-202ENST00000525670 SLC4A9Q96Q91 983 aa8.69□□□□□ -1.02
SVIP-202ENST00000525670 RUBCNLQ9H714 662 aa8.69□□□□□ -1.02
SVIP-202ENST00000525670 PHF24Q9UPV7 400 aa8.69□□□□□ -1.02
SVIP-202ENST00000525670 SYNJ2O15056 1496 aa8.69□□□□□ -1.02
SVIP-202ENST00000525670 RUSC2Q8N2Y8 1516 aa8.69□□□□□ -1.02
SVIP-202ENST00000525670 GDF11O95390 407 aa8.68□□□□□ -1.02
SVIP-202ENST00000525670 SKIP12755 728 aa8.68□□□□□ -1.02
SVIP-202ENST00000525670 EML3Q32P44 896 aa8.68□□□□□ -1.02
SVIP-202ENST00000525670 EFHC2Q5JST6 749 aa8.68□□□□□ -1.02
SVIP-202ENST00000525670 CHMP7Q8WUX9 453 aaPredicted RBP8.68□□□□□ -1.02
SVIP-202ENST00000525670 ACDQ96AP0 544 aa8.68□□□□□ -1.02
SVIP-202ENST00000525670 NIFKQ9BYG3 293 aaKnown RBP8.68□□□□□ -1.02
SVIP-202ENST00000525670 LRRC4BQ9NT99 713 aa8.68□□□□□ -1.02
SVIP-202ENST00000525670 PCDHGA11Q9Y5H2 935 aa8.68□□□□□ -1.02
SVIP-202ENST00000525670 TMEM229AB2RXF0 380 aa8.67□□□□□ -1.02
SVIP-202ENST00000525670 CDK2AP1O14519 115 aa8.67□□□□□ -1.02
SVIP-202ENST00000525670 UBTFP17480 764 aaKnown RBP8.67□□□□□ -1.02
SVIP-202ENST00000525670 MAP2K3P46734 347 aa8.67□□□□□ -1.02
SVIP-202ENST00000525670 UBAP2LQ14157 1087 aaKnown RBP8.67□□□□□ -1.02
SVIP-202ENST00000525670 TBC1D9Q6ZT07 1266 aa8.67□□□□□ -1.02
SVIP-202ENST00000525670 SERTAD1Q9UHV2 236 aa8.67□□□□□ -1.02
SVIP-202ENST00000525670 NOD1Q9Y239 953 aa8.67□□□□□ -1.02
SVIP-202ENST00000525670 CEP170Q5SW79 1584 aa8.66□□□□□ -1.02
SVIP-202ENST00000525670 ERICH3Q5RHP9 1530 aa8.66□□□□□ -1.02
SVIP-202ENST00000525670 KIF27Q86VH2 1401 aa8.66□□□□□ -1.02
SVIP-202ENST00000525670 IRS1P35568 1242 aa8.66□□□□□ -1.02
SVIP-202ENST00000525670 PLA2G4AP47712 749 aa8.66□□□□□ -1.02
SVIP-202ENST00000525670 C1orf216Q8TAB5 229 aa8.66□□□□□ -1.02
SVIP-202ENST00000525670 CRISPLD1Q9H336 500 aa8.66□□□□□ -1.02
SVIP-202ENST00000525670 RIMBP3CA6NJZ7 1639 aa8.65□□□□□ -1.02
SVIP-202ENST00000525670 RIMBP3BA6NNM3 1639 aa8.65□□□□□ -1.02
SVIP-202ENST00000525670 RIMBP3Q9UFD9 1639 aa8.65□□□□□ -1.02
SVIP-202ENST00000525670 GRIN2AQ12879 1464 aa8.65□□□□□ -1.02
SVIP-202ENST00000525670 A6NJY4 79 aa8.65□□□□□ -1.02
SVIP-202ENST00000525670 KANK3Q6NY19 840 aa8.65□□□□□ -1.02
SVIP-202ENST00000525670 KCTD17Q8N5Z5 321 aa8.65□□□□□ -1.02
SVIP-202ENST00000525670 ATXN7L1Q9ULK2 861 aaPredicted RBP8.65□□□□□ -1.02
SVIP-202ENST00000525670 CLASP1Q7Z460 1538 aa8.64□□□□□ -1.03
SVIP-202ENST00000525670 MTFR1Q15390 333 aa8.64□□□□□ -1.03
SVIP-202ENST00000525670 FAM9AQ8IZU1 332 aaPredicted RBP8.64□□□□□ -1.03
SVIP-202ENST00000525670 NEDD1Q8NHV4 660 aa8.64□□□□□ -1.03
SVIP-202ENST00000525670 AIDAQ96BJ3 306 aa8.64□□□□□ -1.03
SVIP-202ENST00000525670 OXCT2Q9BYC2 517 aaPredicted RBP8.64□□□□□ -1.03
SVIP-202ENST00000525670 FHAD1B1AJZ9 1412 aa8.63□□□□□ -1.03
SVIP-202ENST00000525670 CUL7Q14999 1698 aa8.63□□□□□ -1.03
SVIP-202ENST00000525670 BACH1O14867 736 aa8.63□□□□□ -1.03
SVIP-202ENST00000525670 GTF2IP78347 998 aa8.63□□□□□ -1.03
SVIP-202ENST00000525670 NCOA4Q13772 614 aa8.63□□□□□ -1.03
SVIP-202ENST00000525670 ZNF295-AS1Q8N0V1 137 aa8.63□□□□□ -1.03
SVIP-202ENST00000525670 KLRG1Q96E93 195 aa8.63□□□□□ -1.03
SVIP-202ENST00000525670 NDFIP2Q9NV92 336 aa8.63□□□□□ -1.03
SVIP-202ENST00000525670 IQSEC3Q9UPP2 1182 aaPredicted RBP8.63□□□□□ -1.03
SVIP-202ENST00000525670 ARHGEF11O15085 1522 aa8.63□□□□□ -1.03
SVIP-202ENST00000525670 POM121CA8CG34 1229 aa8.62□□□□□ -1.03
SVIP-202ENST00000525670 OIP5O43482 229 aa8.62□□□□□ -1.03
SVIP-202ENST00000525670 BNIP3LO60238 219 aa8.62□□□□□ -1.03
SVIP-202ENST00000525670 FIGNL1Q6PIW4 674 aa8.62□□□□□ -1.03
SVIP-202ENST00000525670 NLRP8Q86W28 1048 aa8.62□□□□□ -1.03
SVIP-202ENST00000525670 BEND7Q8N7W2 519 aaPredicted RBP8.62□□□□□ -1.03
SVIP-202ENST00000525670 USP17L5A8MUK1 530 aa8.61□□□□□ -1.03
SVIP-202ENST00000525670 ATP4AP20648 1035 aa8.61□□□□□ -1.03
SVIP-202ENST00000525670 TMEM132AQ24JP5 1023 aa8.61□□□□□ -1.03
SVIP-202ENST00000525670 NBPF1Q3BBV0 1214 aa8.61□□□□□ -1.03
SVIP-202ENST00000525670 HDGFL1Q5TGJ6 251 aa8.61□□□□□ -1.03
SVIP-202ENST00000525670 ADAMTS19Q8TE59 1207 aa8.61□□□□□ -1.03
SVIP-202ENST00000525670 ABHD17AQ96GS6 310 aa8.61□□□□□ -1.03
SVIP-202ENST00000525670 ZCCHC2Q9C0B9 1178 aaKnown RBP8.61□□□□□ -1.03
SVIP-202ENST00000525670 CABP1Q9NZU7 370 aa8.61□□□□□ -1.03
SVIP-202ENST00000525670 PCDHGC4Q9Y5F7 938 aa8.61□□□□□ -1.03
SVIP-202ENST00000525670 ERCC6L2Q5T890 1561 aa8.61□□□□□ -1.03
SVIP-202ENST00000525670 CNTNAP5Q8WYK1 1306 aa8.6□□□□□ -1.03
SVIP-202ENST00000525670 PHF20L1A8MW92 1017 aa8.6□□□□□ -1.03
SVIP-202ENST00000525670 FGFR3P22607 806 aa8.6□□□□□ -1.03
SVIP-202ENST00000525670 PSME1Q06323 249 aa8.6□□□□□ -1.03
SVIP-202ENST00000525670 TRIM50Q86XT4 487 aa8.6□□□□□ -1.03
SVIP-202ENST00000525670 DEPDC4Q8N2C3 294 aa8.6□□□□□ -1.03
SVIP-202ENST00000525670 DNAAF2Q9NVR5 837 aaKnown RBP8.6□□□□□ -1.03
SVIP-202ENST00000525670 GDF2Q9UK05 429 aaPredicted RBP8.6□□□□□ -1.03
SVIP-202ENST00000525670 DNMT3AQ9Y6K1 912 aaPredicted RBP8.6□□□□□ -1.03
SVIP-202ENST00000525670 C2CD2LO14523 706 aa8.59□□□□□ -1.03
SVIP-202ENST00000525670 BMP4P12644 408 aa8.59□□□□□ -1.03
SVIP-202ENST00000525670 TATP17735 454 aaPredicted RBP8.59□□□□□ -1.03
SVIP-202ENST00000525670 ARSJQ5FYB0 599 aaPredicted RBP8.59□□□□□ -1.03
SVIP-202ENST00000525670 PODNQ7Z5L7 613 aa8.59□□□□□ -1.03
SVIP-202ENST00000525670 PLEKHM2Q8IWE5 1019 aa8.59□□□□□ -1.03
SVIP-202ENST00000525670 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.59□□□□□ -1.03
SVIP-202ENST00000525670 ZNF358Q9NW07 568 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms