RNA–Protein interactions for RNA: ENST00000525428.5

CLNS1A-204, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLNS1A, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-204ENST00000525428 FBXO38Q6PIJ6 1188 aa13.46□□□□□ -0.25
CLNS1A-204ENST00000525428 LUZP1Q86V48 1076 aa13.46□□□□□ -0.25
CLNS1A-204ENST00000525428 TSPYL6Q8N831 410 aa13.46□□□□□ -0.25
CLNS1A-204ENST00000525428 SECISBP2LQ93073 1101 aaKnown RBP13.46□□□□□ -0.25
CLNS1A-204ENST00000525428 FEZ2Q9UHY8 353 aaPredicted RBP13.46□□□□□ -0.25
CLNS1A-204ENST00000525428 PRR36Q9H6K5 1346 aa13.46□□□□□ -0.25
CLNS1A-204ENST00000525428 SETD1BQ9UPS6 1966 aaKnown RBP13.46□□□□□ -0.25
CLNS1A-204ENST00000525428 RBM6P78332 1123 aaKnown RBP13.46□□□□□ -0.26
CLNS1A-204ENST00000525428 C14orf37Q86TY3 774 aa13.46□□□□□ -0.26
CLNS1A-204ENST00000525428 RGS22Q8NE09 1264 aa13.46□□□□□ -0.26
CLNS1A-204ENST00000525428 NOL10Q9BSC4 688 aaKnown RBP13.46□□□□□ -0.26
CLNS1A-204ENST00000525428 MYOM1P52179 1685 aa13.46□□□□□ -0.26
CLNS1A-204ENST00000525428 CAMK4Q16566 473 aa13.45□□□□□ -0.26
CLNS1A-204ENST00000525428 RAD51AP2Q09MP3 1159 aa13.45□□□□□ -0.26
CLNS1A-204ENST00000525428 ZNF397Q8NF99 534 aaPredicted RBP13.45□□□□□ -0.26
CLNS1A-204ENST00000525428 A0A1W2PP64 1363 aa13.45□□□□□ -0.26
CLNS1A-204ENST00000525428 TPM3P06753 285 aa13.44□□□□□ -0.26
CLNS1A-204ENST00000525428 SLIT1O75093 1534 aa13.44□□□□□ -0.26
CLNS1A-204ENST00000525428 WDR33Q9C0J8 1336 aaKnown RBP13.44□□□□□ -0.26
CLNS1A-204ENST00000525428 ANO2Q9NQ90 1003 aa13.44□□□□□ -0.26
CLNS1A-204ENST00000525428 RSPH14Q9UHP6 348 aa13.44□□□□□ -0.26
CLNS1A-204ENST00000525428 SOX12O15370 315 aa13.44□□□□□ -0.26
CLNS1A-204ENST00000525428 CEP135Q66GS9 1140 aa13.44□□□□□ -0.26
CLNS1A-204ENST00000525428 TRIM5Q9C035 493 aa13.44□□□□□ -0.26
CLNS1A-204ENST00000525428 POLR3GO15318 223 aaPredicted RBP13.43□□□□□ -0.26
CLNS1A-204ENST00000525428 NEK11Q8NG66 645 aa13.43□□□□□ -0.26
CLNS1A-204ENST00000525428 CFAP44Q96MT7 982 aa13.43□□□□□ -0.26
CLNS1A-204ENST00000525428 KDM5AP29375 1690 aaKnown RBP13.43□□□□□ -0.26
CLNS1A-204ENST00000525428 SHPRHQ149N8 1683 aa13.43□□□□□ -0.26
CLNS1A-204ENST00000525428 UBE2HP62256 183 aa13.43□□□□□ -0.26
CLNS1A-204ENST00000525428 ALDH1L2Q3SY69 923 aa13.43□□□□□ -0.26
CLNS1A-204ENST00000525428 PLEKHF1Q96S99 279 aa13.43□□□□□ -0.26
CLNS1A-204ENST00000525428 PAXBP1Q9Y5B6 917 aa13.43□□□□□ -0.26
CLNS1A-204ENST00000525428 DCTPP1Q9H773 170 aa13.42□□□□□ -0.26
CLNS1A-204ENST00000525428 TRMT1Q9NXH9 659 aaKnown RBP13.42□□□□□ -0.26
CLNS1A-204ENST00000525428 SYCP1Q15431 976 aa13.42□□□□□ -0.26
CLNS1A-204ENST00000525428 SETD1AO15047 1707 aaKnown RBP13.42□□□□□ -0.26
CLNS1A-204ENST00000525428 MED14O60244 1454 aa13.42□□□□□ -0.26
CLNS1A-204ENST00000525428 USP27XA6NNY8 438 aa13.41□□□□□ -0.26
CLNS1A-204ENST00000525428 CUL4AQ13619 759 aa13.41□□□□□ -0.26
CLNS1A-204ENST00000525428 ZSCAN25Q6NSZ9 544 aa13.41□□□□□ -0.26
CLNS1A-204ENST00000525428 CKAP2LQ8IYA6 745 aa13.41□□□□□ -0.26
CLNS1A-204ENST00000525428 CCDC61Q9Y6R9 512 aa13.41□□□□□ -0.26
CLNS1A-204ENST00000525428 FYB1O15117 783 aa13.41□□□□□ -0.26
CLNS1A-204ENST00000525428 MRPL50Q8N5N7 158 aaKnown RBP13.41□□□□□ -0.26
CLNS1A-204ENST00000525428 TERF2IPQ9NYB0 399 aa13.41□□□□□ -0.26
CLNS1A-204ENST00000525428 CCDC192P0DO97 292 aa13.41□□□□□ -0.26
CLNS1A-204ENST00000525428 HDGFL2Q7Z4V5 671 aaPredicted RBP13.41□□□□□ -0.26
CLNS1A-204ENST00000525428 NME9Q86XW9 330 aa13.41□□□□□ -0.26
CLNS1A-204ENST00000525428 C10orf67Q8IYJ2 551 aa13.41□□□□□ -0.26
CLNS1A-204ENST00000525428 SYTL4Q96C24 671 aaPredicted RBP13.41□□□□□ -0.26
CLNS1A-204ENST00000525428 FUCA2Q9BTY2 467 aa13.41□□□□□ -0.26
CLNS1A-204ENST00000525428 ZNF446Q9NWS9 450 aa13.41□□□□□ -0.26
CLNS1A-204ENST00000525428 CYP2C19P33261 490 aa13.4□□□□□ -0.26
CLNS1A-204ENST00000525428 MCM2P49736 904 aa13.4□□□□□ -0.26
CLNS1A-204ENST00000525428 GYS2P54840 703 aa13.4□□□□□ -0.26
CLNS1A-204ENST00000525428 ARID5BQ14865 1188 aa13.4□□□□□ -0.26
CLNS1A-204ENST00000525428 NUTM2GQ5VZR2 741 aa13.4□□□□□ -0.26
CLNS1A-204ENST00000525428 TEX2Q8IWB9 1127 aa13.4□□□□□ -0.26
CLNS1A-204ENST00000525428 CACTINQ8WUQ7 758 aaKnown RBP13.4□□□□□ -0.26
CLNS1A-204ENST00000525428 TRIM66O15016 1216 aa13.39□□□□□ -0.27
CLNS1A-204ENST00000525428 VAMP4O75379 141 aa13.39□□□□□ -0.27
CLNS1A-204ENST00000525428 DNM1Q05193 864 aaKnown RBP13.39□□□□□ -0.27
CLNS1A-204ENST00000525428 RILPL2Q969X0 211 aa13.39□□□□□ -0.27
CLNS1A-204ENST00000525428 PROSER2Q86WR7 435 aaPredicted RBP13.39□□□□□ -0.27
CLNS1A-204ENST00000525428 INTS4Q96HW7 963 aaKnown RBP13.39□□□□□ -0.27
CLNS1A-204ENST00000525428 NPHP4O75161 1426 aaPredicted RBP13.39□□□□□ -0.27
CLNS1A-204ENST00000525428 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.38□□□□□ -0.27
CLNS1A-204ENST00000525428 MCCP23508 829 aa13.38□□□□□ -0.27
CLNS1A-204ENST00000525428 TSPYL1Q9H0U9 437 aa13.38□□□□□ -0.27
CLNS1A-204ENST00000525428 ZSCAN22P10073 491 aaPredicted RBP13.38□□□□□ -0.27
CLNS1A-204ENST00000525428 PTPN14Q15678 1187 aa13.38□□□□□ -0.27
CLNS1A-204ENST00000525428 KRT24Q2M2I5 525 aa13.38□□□□□ -0.27
CLNS1A-204ENST00000525428 FAM200AQ8TCP9 573 aa13.38□□□□□ -0.27
CLNS1A-204ENST00000525428 CLIP2Q9UDT6 1046 aa13.38□□□□□ -0.27
CLNS1A-204ENST00000525428 TCHHQ07283 1943 aa13.38□□□□□ -0.27
CLNS1A-204ENST00000525428 ACEP12821 1306 aa13.37□□□□□ -0.27
CLNS1A-204ENST00000525428 SYT1P21579 422 aa13.37□□□□□ -0.27
CLNS1A-204ENST00000525428 ERCC6LQ2NKX8 1250 aa13.37□□□□□ -0.27
CLNS1A-204ENST00000525428 CCDC144BQ3MJ40 725 aa13.37□□□□□ -0.27
CLNS1A-204ENST00000525428 SYT10Q6XYQ8 523 aa13.37□□□□□ -0.27
CLNS1A-204ENST00000525428 KRBA2Q6ZNG9 492 aa13.37□□□□□ -0.27
CLNS1A-204ENST00000525428 CCDC144CPQ8IYA2 1237 aa13.37□□□□□ -0.27
CLNS1A-204ENST00000525428 LOC102724159A0A0B4J2E5 919 aa13.37□□□□□ -0.27
CLNS1A-204ENST00000525428 PWP2Q15269 919 aaKnown RBP13.37□□□□□ -0.27
CLNS1A-204ENST00000525428 NGDNQ8NEJ9 315 aaKnown RBP13.37□□□□□ -0.27
CLNS1A-204ENST00000525428 SIRT1Q96EB6 747 aa13.37□□□□□ -0.27
CLNS1A-204ENST00000525428 TECPR2O15040 1411 aa13.36□□□□□ -0.27
CLNS1A-204ENST00000525428 FAM135BQ49AJ0 1406 aa13.36□□□□□ -0.27
CLNS1A-204ENST00000525428 STX6O43752 255 aa13.36□□□□□ -0.27
CLNS1A-204ENST00000525428 ANO6Q4KMQ2 910 aa13.36□□□□□ -0.27
CLNS1A-204ENST00000525428 TOMM22Q9NS69 142 aa13.36□□□□□ -0.27
CLNS1A-204ENST00000525428 CD163L1Q9NR16 1453 aa13.36□□□□□ -0.27
CLNS1A-204ENST00000525428 RASSF4Q9H2L5 321 aa13.36□□□□□ -0.27
CLNS1A-204ENST00000525428 LCMT1Q9UIC8 334 aa13.36□□□□□ -0.27
CLNS1A-204ENST00000525428 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.36□□□□□ -0.27
CLNS1A-204ENST00000525428 TYRO3Q06418 890 aa13.35□□□□□ -0.27
CLNS1A-204ENST00000525428 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.35□□□□□ -0.27
CLNS1A-204ENST00000525428 IL16Q14005 1332 aa13.35□□□□□ -0.27
CLNS1A-204ENST00000525428 BMS1Q14692 1282 aaKnown RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms