RNA–Protein interactions for RNA: ENST00000525207.1

SF3B2-204, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-204ENST00000525207 DLEC1Q9Y238 1755 aa12.66□□□□□ -0.38
SF3B2-204ENST00000525207 CYP19A1P11511 503 aaPredicted RBP12.65□□□□□ -0.38
SF3B2-204ENST00000525207 TEFQ10587 303 aa12.65□□□□□ -0.38
SF3B2-204ENST00000525207 IL17REQ8NFR9 667 aa12.65□□□□□ -0.38
SF3B2-204ENST00000525207 PHACTR3Q96KR7 559 aa12.65□□□□□ -0.38
SF3B2-204ENST00000525207 SRP68Q9UHB9 627 aaKnown RBP12.65□□□□□ -0.38
SF3B2-204ENST00000525207 ZBTB1Q9Y2K1 713 aa12.65□□□□□ -0.38
SF3B2-204ENST00000525207 ADCY9O60503 1353 aa12.65□□□□□ -0.38
SF3B2-204ENST00000525207 HEG1Q9ULI3 1381 aa12.65□□□□□ -0.38
SF3B2-204ENST00000525207 KDM3BQ7LBC6 1761 aa12.64□□□□□ -0.39
SF3B2-204ENST00000525207 U2AF1L5P0DN76 240 aaPredicted RBP12.64□□□□□ -0.39
SF3B2-204ENST00000525207 U2AF1Q01081 240 aaKnown RBP eCLIP12.64□□□□□ -0.392e-8■■□□□ 12.6
SF3B2-204ENST00000525207 TTC5Q8N0Z6 440 aa12.64□□□□□ -0.39
SF3B2-204ENST00000525207 ZNF790Q6PG37 636 aa12.63□□□□□ -0.39
SF3B2-204ENST00000525207 ZNF496Q96IT1 587 aaPredicted RBP12.63□□□□□ -0.39
SF3B2-204ENST00000525207 PARP3Q9Y6F1 533 aa12.63□□□□□ -0.39
SF3B2-204ENST00000525207 FCHSD2O94868 740 aa12.62□□□□□ -0.39
SF3B2-204ENST00000525207 DDR1Q08345 913 aa12.62□□□□□ -0.39
SF3B2-204ENST00000525207 FKBP8Q14318 412 aa12.62□□□□□ -0.39
SF3B2-204ENST00000525207 WWC3Q9ULE0 1092 aa12.62□□□□□ -0.39
SF3B2-204ENST00000525207 TGFB2P61812 414 aa12.61□□□□□ -0.39
SF3B2-204ENST00000525207 ATP10DQ9P241 1426 aa12.61□□□□□ -0.39
SF3B2-204ENST00000525207 POLRMTO00411 1230 aaKnown RBP12.6□□□□□ -0.39
SF3B2-204ENST00000525207 USPL1Q5W0Q7 1092 aa12.6□□□□□ -0.39
SF3B2-204ENST00000525207 NARFQ9UHQ1 456 aa12.6□□□□□ -0.39
SF3B2-204ENST00000525207 ANKRD31Q8N7Z5 1873 aa12.59□□□□□ -0.39
SF3B2-204ENST00000525207 ZPR1O75312 459 aa12.59□□□□□ -0.39
SF3B2-204ENST00000525207 STARD3NLO95772 234 aa12.59□□□□□ -0.39
SF3B2-204ENST00000525207 FMNL2Q96PY5 1086 aa12.59□□□□□ -0.39
SF3B2-204ENST00000525207 COL11A2P13942 1736 aaPredicted RBP12.59□□□□□ -0.39
SF3B2-204ENST00000525207 BTBD11A6QL63 1104 aa12.58□□□□□ -0.4
SF3B2-204ENST00000525207 TM4SF1P30408 202 aa12.58□□□□□ -0.4
SF3B2-204ENST00000525207 EIF5P55010 431 aaKnown RBP12.58□□□□□ -0.4
SF3B2-204ENST00000525207 MCM10Q7L590 875 aa12.58□□□□□ -0.4
SF3B2-204ENST00000525207 RTF1Q92541 710 aaKnown RBP12.58□□□□□ -0.4
SF3B2-204ENST00000525207 BCL2L12Q9HB09 334 aa12.58□□□□□ -0.4
SF3B2-204ENST00000525207 A0A0G2JLW4 131 aa12.57□□□□□ -0.4
SF3B2-204ENST00000525207 KCNQ3O43525 872 aa12.57□□□□□ -0.4
SF3B2-204ENST00000525207 HTATSF1O43719 755 aaKnown RBP12.57□□□□□ -0.4
SF3B2-204ENST00000525207 DPEP1P16444 411 aa12.57□□□□□ -0.4
SF3B2-204ENST00000525207 CANXP27824 592 aaKnown RBP12.57□□□□□ -0.4
SF3B2-204ENST00000525207 NFIXQ14938 502 aa12.57□□□□□ -0.4
SF3B2-204ENST00000525207 TEX13AQ9BXU3 409 aaPredicted RBP12.57□□□□□ -0.4
SF3B2-204ENST00000525207 BCS1LQ9Y276 419 aa12.57□□□□□ -0.4
SF3B2-204ENST00000525207 CARMIL3Q8ND23 1372 aa12.56□□□□□ -0.4
SF3B2-204ENST00000525207 DCTN1Q14203 1278 aa12.56□□□□□ -0.4
SF3B2-204ENST00000525207 PLEKHF1Q96S99 279 aa12.56□□□□□ -0.4
SF3B2-204ENST00000525207 A0A087WZG4 1122 aa12.55□□□□□ -0.4
SF3B2-204ENST00000525207 GIGYF1O75420 1035 aaPredicted RBP12.55□□□□□ -0.4
SF3B2-204ENST00000525207 KCNA3P22001 575 aa12.55□□□□□ -0.4
SF3B2-204ENST00000525207 IL6STP40189 918 aaPredicted RBP12.55□□□□□ -0.4
SF3B2-204ENST00000525207 RALBP1Q15311 655 aa12.55□□□□□ -0.4
SF3B2-204ENST00000525207 ARFGEF2Q9Y6D5 1785 aa12.55□□□□□ -0.4
SF3B2-204ENST00000525207 SBF1O95248 1867 aa12.55□□□□□ -0.4
SF3B2-204ENST00000525207 NEFMP07197 916 aa12.54□□□□□ -0.4
SF3B2-204ENST00000525207 ZNF330Q9Y3S2 320 aaPredicted RBP12.54□□□□□ -0.4
SF3B2-204ENST00000525207 CACNA1SQ13698 1873 aa12.53□□□□□ -0.4
SF3B2-204ENST00000525207 PRAMEF22A3QJZ6 481 aa12.53□□□□□ -0.4
SF3B2-204ENST00000525207 A1BGP04217 495 aa12.53□□□□□ -0.4
SF3B2-204ENST00000525207 CHRNA5P30532 468 aa12.53□□□□□ -0.4
SF3B2-204ENST00000525207 C1QTNF8P60827 252 aa12.53□□□□□ -0.4
SF3B2-204ENST00000525207 NFE2L2Q16236 605 aa12.53□□□□□ -0.4
SF3B2-204ENST00000525207 PIM2Q9P1W9 311 aa12.53□□□□□ -0.4
SF3B2-204ENST00000525207 MYBBP1AQ9BQG0 1328 aaKnown RBP12.53□□□□□ -0.4
SF3B2-204ENST00000525207 MAPK8IP3Q9UPT6 1336 aa12.53□□□□□ -0.4
SF3B2-204ENST00000525207 TIAM2Q8IVF5 1701 aa12.53□□□□□ -0.4
SF3B2-204ENST00000525207 CAMTA2O94983 1202 aa12.52□□□□□ -0.41
SF3B2-204ENST00000525207 SERPINB2P05120 415 aa12.52□□□□□ -0.41
SF3B2-204ENST00000525207 SNRPA1P09661 255 aaKnown RBP12.52□□□□□ -0.41
SF3B2-204ENST00000525207 TBC1D9BQ66K14 1250 aa12.52□□□□□ -0.41
SF3B2-204ENST00000525207 USP16Q9Y5T5 823 aa12.52□□□□□ -0.41
SF3B2-204ENST00000525207 PIP4K2AP48426 406 aaPredicted RBP12.51□□□□□ -0.41
SF3B2-204ENST00000525207 DDX10Q13206 875 aaKnown RBP12.51□□□□□ -0.41
SF3B2-204ENST00000525207 TAF7Q15545 349 aaPredicted RBP12.51□□□□□ -0.41
SF3B2-204ENST00000525207 GPBP1L1Q9HC44 474 aaPredicted RBP12.51□□□□□ -0.41
SF3B2-204ENST00000525207 TBC1D2BQ9UPU7 963 aa12.51□□□□□ -0.41
SF3B2-204ENST00000525207 TNRC6CQ9HCJ0 1690 aaKnown RBP12.51□□□□□ -0.41
SF3B2-204ENST00000525207 DALRD3Q5D0E6 543 aaKnown RBP12.5□□□□□ -0.41
SF3B2-204ENST00000525207 BICDL1Q6ZP65 573 aa12.5□□□□□ -0.41
SF3B2-204ENST00000525207 NPM2Q86SE8 214 aaKnown RBP12.5□□□□□ -0.41
SF3B2-204ENST00000525207 DZIP3Q86Y13 1208 aaKnown RBP12.5□□□□□ -0.41
SF3B2-204ENST00000525207 PNNQ9H307 717 aaKnown RBP12.5□□□□□ -0.41
SF3B2-204ENST00000525207 FER1L6Q2WGJ9 1857 aa12.49□□□□□ -0.41
SF3B2-204ENST00000525207 NUP98P52948 1817 aa12.49□□□□□ -0.41
SF3B2-204ENST00000525207 ZNF526Q8TF50 670 aaPredicted RBP12.49□□□□□ -0.41
SF3B2-204ENST00000525207 THUMPD2Q9BTF0 503 aaKnown RBP12.49□□□□□ -0.41
SF3B2-204ENST00000525207 CCDC88AQ3V6T2 1871 aa12.48□□□□□ -0.41
SF3B2-204ENST00000525207 NBPF26B4DH59 902 aa12.48□□□□□ -0.41
SF3B2-204ENST00000525207 PRR5LQ6MZQ0 368 aa12.48□□□□□ -0.41
SF3B2-204ENST00000525207 NBPF10Q6P3W6 841 aaKnown RBP12.48□□□□□ -0.41
SF3B2-204ENST00000525207 ARHGAP27Q6ZUM4 889 aa12.48□□□□□ -0.41
SF3B2-204ENST00000525207 NBPF15Q8N660 670 aa12.48□□□□□ -0.41
SF3B2-204ENST00000525207 PNISRQ8TF01 805 aaKnown RBP12.48□□□□□ -0.41
SF3B2-204ENST00000525207 MIS18AQ9NYP9 233 aa12.48□□□□□ -0.41
SF3B2-204ENST00000525207 RGL2O15211 777 aa12.47□□□□□ -0.41
SF3B2-204ENST00000525207 CNBD1Q8NA66 436 aa12.47□□□□□ -0.41
SF3B2-204ENST00000525207 ZNF652Q9Y2D9 606 aa12.47□□□□□ -0.41
SF3B2-204ENST00000525207 DICER1Q9UPY3 1922 aaKnown RBP12.47□□□□□ -0.41
SF3B2-204ENST00000525207 ANKRD36CQ5JPF3 1778 aa12.46□□□□□ -0.41
SF3B2-204ENST00000525207 SENP3-EIF4A1A0A087X0R7 540 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms