RNA–Protein interactions for RNA: ENST00000524534.5

PTPRK-217, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 2,441 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-217ENST00000524534 FOXD4L6Q3SYB3 417 aaPredicted RBP13.89□□□□□ -0.19
PTPRK-217ENST00000524534 FOXD4L3Q6VB84 417 aaPredicted RBP13.89□□□□□ -0.19
PTPRK-217ENST00000524534 TTC14Q96N46 770 aa13.89□□□□□ -0.19
PTPRK-217ENST00000524534 RAD50Q92878 1312 aa13.89□□□□□ -0.19
PTPRK-217ENST00000524534 SGSM2O43147 1006 aa13.89□□□□□ -0.19
PTPRK-217ENST00000524534 CCDC183Q5T5S1 534 aa13.89□□□□□ -0.19
PTPRK-217ENST00000524534 TMEM2Q9UHN6 1383 aa13.89□□□□□ -0.19
PTPRK-217ENST00000524534 NUTM2FA1L443 756 aa13.88□□□□□ -0.19
PTPRK-217ENST00000524534 UBTFL1P0CB47 393 aaPredicted RBP13.88□□□□□ -0.19
PTPRK-217ENST00000524534 FAM69CQ0P6D2 419 aa13.88□□□□□ -0.19
PTPRK-217ENST00000524534 POLA2Q14181 598 aa13.88□□□□□ -0.19
PTPRK-217ENST00000524534 MTERF4Q7Z6M4 381 aaKnown RBP13.88□□□□□ -0.19
PTPRK-217ENST00000524534 PI4K2BQ8TCG2 481 aa13.88□□□□□ -0.19
PTPRK-217ENST00000524534 IL1RAPL2Q9NP60 686 aa13.88□□□□□ -0.19
PTPRK-217ENST00000524534 SNX14Q9Y5W7 946 aa13.88□□□□□ -0.19
PTPRK-217ENST00000524534 GNAT3A8MTJ3 354 aa13.88□□□□□ -0.19
PTPRK-217ENST00000524534 LETM1O95202 739 aaPredicted RBP13.88□□□□□ -0.19
PTPRK-217ENST00000524534 ZSCAN22P10073 491 aaPredicted RBP13.88□□□□□ -0.19
PTPRK-217ENST00000524534 NUTM1Q86Y26 1132 aa13.88□□□□□ -0.19
PTPRK-217ENST00000524534 NECTIN2Q92692 538 aa13.88□□□□□ -0.19
PTPRK-217ENST00000524534 BABAM1Q9NWV8 329 aa13.88□□□□□ -0.19
PTPRK-217ENST00000524534 LSG1Q9H089 658 aaKnown RBP13.87□□□□□ -0.19
PTPRK-217ENST00000524534 CACNA1FO60840 1977 aa13.87□□□□□ -0.19
PTPRK-217ENST00000524534 KLHL34Q8N239 644 aa13.86□□□□□ -0.19
PTPRK-217ENST00000524534 CNPY2Q9Y2B0 182 aa13.86□□□□□ -0.19
PTPRK-217ENST00000524534 PTPRUQ92729 1446 aa13.86□□□□□ -0.19
PTPRK-217ENST00000524534 UBE2HP62256 183 aa13.86□□□□□ -0.19
PTPRK-217ENST00000524534 RHPN1Q8TCX5 695 aa13.86□□□□□ -0.19
PTPRK-217ENST00000524534 AMPHP49418 695 aa13.85□□□□□ -0.19
PTPRK-217ENST00000524534 AK2P54819 239 aa13.85□□□□□ -0.19
PTPRK-217ENST00000524534 PPP1R42Q7Z4L9 355 aa13.85□□□□□ -0.19
PTPRK-217ENST00000524534 PIBF1Q8WXW3 757 aa13.85□□□□□ -0.19
PTPRK-217ENST00000524534 LIMCH1Q9UPQ0 1083 aa13.85□□□□□ -0.19
PTPRK-217ENST00000524534 TNRQ92752 1358 aa13.85□□□□□ -0.19
PTPRK-217ENST00000524534 DIP2BQ9P265 1576 aa13.85□□□□□ -0.19
PTPRK-217ENST00000524534 STX6O43752 255 aa13.85□□□□□ -0.19
PTPRK-217ENST00000524534 SYT1P21579 422 aa13.85□□□□□ -0.19
PTPRK-217ENST00000524534 RUFY3Q7L099 469 aa13.85□□□□□ -0.19
PTPRK-217ENST00000524534 RASEFQ8IZ41 740 aa13.85□□□□□ -0.19
PTPRK-217ENST00000524534 IL17REQ8NFR9 667 aa13.85□□□□□ -0.19
PTPRK-217ENST00000524534 USP25Q9UHP3 1055 aa13.85□□□□□ -0.19
PTPRK-217ENST00000524534 SURF6O75683 361 aaKnown RBP13.84□□□□□ -0.19
PTPRK-217ENST00000524534 MAP4K4O95819 1239 aaPredicted RBP13.84□□□□□ -0.19
PTPRK-217ENST00000524534 TAF7Q15545 349 aaPredicted RBP13.84□□□□□ -0.19
PTPRK-217ENST00000524534 MYRIPQ8NFW9 859 aa13.84□□□□□ -0.19
PTPRK-217ENST00000524534 KIF1BPQ96EK5 621 aa13.84□□□□□ -0.19
PTPRK-217ENST00000524534 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.84□□□□□ -0.19
PTPRK-217ENST00000524534 ADCY5O95622 1261 aa13.84□□□□□ -0.19
PTPRK-217ENST00000524534 F13A1P00488 732 aa13.84□□□□□ -0.19
PTPRK-217ENST00000524534 CNTROBQ8N137 903 aa13.84□□□□□ -0.19
PTPRK-217ENST00000524534 MAP3K5Q99683 1374 aa13.84□□□□□ -0.19
PTPRK-217ENST00000524534 UBR1Q8IWV7 1749 aa13.83□□□□□ -0.19
PTPRK-217ENST00000524534 FUCA2Q9BTY2 467 aa13.83□□□□□ -0.19
PTPRK-217ENST00000524534 USP42Q9H9J4 1324 aaKnown RBP13.83□□□□□ -0.2
PTPRK-217ENST00000524534 TCHHQ07283 1943 aa13.83□□□□□ -0.2
PTPRK-217ENST00000524534 PLEKHG1Q9ULL1 1385 aa13.83□□□□□ -0.2
PTPRK-217ENST00000524534 NWD1Q149M9 1564 aa13.83□□□□□ -0.2
PTPRK-217ENST00000524534 HCLS1P14317 486 aaPredicted RBP13.83□□□□□ -0.2
PTPRK-217ENST00000524534 NOLC1Q14978 699 aaKnown RBP eCLIP13.83□□□□□ -0.22e-6■■■■□ 20
PTPRK-217ENST00000524534 PHAXQ9H814 394 aaKnown RBP13.83□□□□□ -0.2
PTPRK-217ENST00000524534 ATP6V1DQ9Y5K8 247 aa13.83□□□□□ -0.2
PTPRK-217ENST00000524534 CRYBG1Q9Y4K1 1723 aa13.82□□□□□ -0.2
PTPRK-217ENST00000524534 PRIMPOLQ96LW4 560 aa13.82□□□□□ -0.2
PTPRK-217ENST00000524534 ESF1Q9H501 851 aaKnown RBP13.82□□□□□ -0.2
PTPRK-217ENST00000524534 SMC3Q9UQE7 1217 aa13.82□□□□□ -0.2
PTPRK-217ENST00000524534 KDM4AO75164 1064 aa13.82□□□□□ -0.2
PTPRK-217ENST00000524534 HDGFL1Q5TGJ6 251 aa13.82□□□□□ -0.2
PTPRK-217ENST00000524534 ZNF830Q96NB3 372 aaPredicted RBP13.82□□□□□ -0.2
PTPRK-217ENST00000524534 SRGAP3O43295 1099 aa13.81□□□□□ -0.2
PTPRK-217ENST00000524534 SPTLC3Q9NUV7 552 aa13.81□□□□□ -0.2
PTPRK-217ENST00000524534 HYPKQ9NX55 129 aa13.81□□□□□ -0.2
PTPRK-217ENST00000524534 GTF2F1P35269 517 aaKnown RBP eCLIP13.81□□□□□ -0.21e-7■■■■■ 27.7
PTPRK-217ENST00000524534 TTC12Q9H892 705 aaPredicted RBP13.81□□□□□ -0.2
PTPRK-217ENST00000524534 PIK3C2AO00443 1686 aa13.8□□□□□ -0.2
PTPRK-217ENST00000524534 LARGE1O95461 756 aa13.8□□□□□ -0.2
PTPRK-217ENST00000524534 LTKP29376 864 aa13.8□□□□□ -0.2
PTPRK-217ENST00000524534 HOXC9P31274 260 aa13.8□□□□□ -0.2
PTPRK-217ENST00000524534 HMGN5P82970 282 aaKnown RBP13.8□□□□□ -0.2
PTPRK-217ENST00000524534 CWC27Q6UX04 472 aaKnown RBP13.8□□□□□ -0.2
PTPRK-217ENST00000524534 MPNDQ8N594 471 aa13.8□□□□□ -0.2
PTPRK-217ENST00000524534 KCNB2Q92953 911 aa13.8□□□□□ -0.2
PTPRK-217ENST00000524534 LARP6Q9BRS8 491 aaKnown RBP13.8□□□□□ -0.2
PTPRK-217ENST00000524534 TSPOAP1O95153 1857 aa13.8□□□□□ -0.2
PTPRK-217ENST00000524534 TTC41PQ6P2S7 1318 aa13.8□□□□□ -0.2
PTPRK-217ENST00000524534 FIBPO43427 364 aa13.8□□□□□ -0.2
PTPRK-217ENST00000524534 NBPF7P0C2Y1 421 aaPredicted RBP13.8□□□□□ -0.2
PTPRK-217ENST00000524534 HSP90AB4PQ58FF6 505 aa13.8□□□□□ -0.2
PTPRK-217ENST00000524534 DNTTIP2Q5QJE6 756 aaKnown RBP13.8□□□□□ -0.2
PTPRK-217ENST00000524534 NGDNQ8NEJ9 315 aaKnown RBP13.8□□□□□ -0.2
PTPRK-217ENST00000524534 SPG7Q9UQ90 795 aa13.8□□□□□ -0.2
PTPRK-217ENST00000524534 MTMR6Q9Y217 621 aa13.8□□□□□ -0.2
PTPRK-217ENST00000524534 CASTP20810 708 aaKnown RBP13.79□□□□□ -0.2
PTPRK-217ENST00000524534 BEND3Q5T5X7 828 aa13.79□□□□□ -0.2
PTPRK-217ENST00000524534 VPS53Q5VIR6 699 aa13.79□□□□□ -0.2
PTPRK-217ENST00000524534 CYB5RLQ6IPT4 315 aa13.79□□□□□ -0.2
PTPRK-217ENST00000524534 GLRX3O76003 335 aaKnown RBP13.79□□□□□ -0.2
PTPRK-217ENST00000524534 GJB2P29033 226 aa13.79□□□□□ -0.2
PTPRK-217ENST00000524534 ZSCAN31Q96LW9 406 aaPredicted RBP13.79□□□□□ -0.2
PTPRK-217ENST00000524534 TM6SF1Q9BZW5 370 aa13.79□□□□□ -0.2
PTPRK-217ENST00000524534 CPA1P15085 419 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms