RNA–Protein interactions for RNA: ENST00000524074.1

PFDN1-207, Transcript of prefoldin subunit 1, humanhuman

TSL 5 BASIC

Gene PFDN1, Length 395 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-207ENST00000524074 ZBTB24O43167 697 aaPredicted RBP13□□□□□ -0.33
PFDN1-207ENST00000524074 PSMA6P60900 246 aaKnown RBP13□□□□□ -0.33
PFDN1-207ENST00000524074 FOXK2Q01167 660 aa13□□□□□ -0.33
PFDN1-207ENST00000524074 NIF3L1Q9GZT8 377 aa13□□□□□ -0.33
PFDN1-207ENST00000524074 SCHIP1Q9P0W5 487 aaPredicted RBP13□□□□□ -0.33
PFDN1-207ENST00000524074 PNMA6FA0A0J9YX94 578 aa12.99□□□□□ -0.33
PFDN1-207ENST00000524074 GNL2Q13823 731 aaKnown RBP12.99□□□□□ -0.33
PFDN1-207ENST00000524074 ENOX2Q16206 610 aaKnown RBP12.99□□□□□ -0.33
PFDN1-207ENST00000524074 SLC43A3Q8NBI5 491 aa12.99□□□□□ -0.33
PFDN1-207ENST00000524074 QTRT2Q9H974 415 aaKnown RBP12.99□□□□□ -0.33
PFDN1-207ENST00000524074 TMPRSS4Q9NRS4 437 aa12.99□□□□□ -0.33
PFDN1-207ENST00000524074 PRKAG2Q9UGJ0 569 aa12.99□□□□□ -0.33
PFDN1-207ENST00000524074 A6NJY4 79 aa12.98□□□□□ -0.33
PFDN1-207ENST00000524074 BRD2P25440 801 aaKnown RBP12.98□□□□□ -0.33
PFDN1-207ENST00000524074 ARID5BQ14865 1188 aa12.98□□□□□ -0.33
PFDN1-207ENST00000524074 TJAP1Q5JTD0 557 aa12.98□□□□□ -0.33
PFDN1-207ENST00000524074 SETDB2Q96T68 719 aa12.98□□□□□ -0.33
PFDN1-207ENST00000524074 DNAJC2Q99543 621 aaKnown RBP12.98□□□□□ -0.33
PFDN1-207ENST00000524074 CADPSQ9ULU8 1353 aa12.97□□□□□ -0.33
PFDN1-207ENST00000524074 GNRH1P01148 92 aa12.97□□□□□ -0.33
PFDN1-207ENST00000524074 NCLP19338 710 aaKnown RBP12.97□□□□□ -0.33
PFDN1-207ENST00000524074 ATP2B1P20020 1258 aa12.97□□□□□ -0.33
PFDN1-207ENST00000524074 MYO19Q96H55 970 aa12.97□□□□□ -0.33
PFDN1-207ENST00000524074 NLRP2Q9NX02 1062 aa12.97□□□□□ -0.33
PFDN1-207ENST00000524074 FSHRP23945 695 aa12.96□□□□□ -0.33
PFDN1-207ENST00000524074 USP5P45974 858 aa12.96□□□□□ -0.33
PFDN1-207ENST00000524074 ATCAYQ86WG3 371 aa12.96□□□□□ -0.33
PFDN1-207ENST00000524074 LRFN2Q9ULH4 789 aa12.96□□□□□ -0.33
PFDN1-207ENST00000524074 POLIQ9UNA4 740 aa12.96□□□□□ -0.33
PFDN1-207ENST00000524074 ZBTB39O15060 712 aa12.95□□□□□ -0.34
PFDN1-207ENST00000524074 GNA15P30679 374 aa12.95□□□□□ -0.34
PFDN1-207ENST00000524074 SMTNP53814 917 aa12.95□□□□□ -0.34
PFDN1-207ENST00000524074 GJD3Q8N144 294 aa12.95□□□□□ -0.34
PFDN1-207ENST00000524074 ZNF784Q8NCA9 323 aaPredicted RBP12.95□□□□□ -0.34
PFDN1-207ENST00000524074 MZF1P28698 734 aaPredicted RBP12.94□□□□□ -0.34
PFDN1-207ENST00000524074 TRIM32Q13049 653 aa12.94□□□□□ -0.34
PFDN1-207ENST00000524074 MTFR1Q15390 333 aa12.94□□□□□ -0.34
PFDN1-207ENST00000524074 KCTD12Q96CX2 325 aaKnown RBP12.94□□□□□ -0.34
PFDN1-207ENST00000524074 ACBD3Q9H3P7 528 aa12.94□□□□□ -0.34
PFDN1-207ENST00000524074 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.94□□□□□ -0.34
PFDN1-207ENST00000524074 WNT7BP56706 349 aa12.93□□□□□ -0.34
PFDN1-207ENST00000524074 MYT1Q01538 1121 aa12.93□□□□□ -0.34
PFDN1-207ENST00000524074 DNM1Q05193 864 aaKnown RBP12.93□□□□□ -0.34
PFDN1-207ENST00000524074 GIMAP6Q6P9H5 292 aa12.93□□□□□ -0.34
PFDN1-207ENST00000524074 NGLY1Q96IV0 654 aa12.93□□□□□ -0.34
PFDN1-207ENST00000524074 CUEDC1Q9NWM3 386 aaPredicted RBP12.93□□□□□ -0.34
PFDN1-207ENST00000524074 GTF2F1P35269 517 aaKnown RBP eCLIP12.92□□□□□ -0.34
PFDN1-207ENST00000524074 NKX2-3Q8TAU0 364 aa12.92□□□□□ -0.34
PFDN1-207ENST00000524074 FBF1Q8TES7 1133 aa12.92□□□□□ -0.34
PFDN1-207ENST00000524074 DHX38Q92620 1227 aaKnown RBP12.92□□□□□ -0.34
PFDN1-207ENST00000524074 EMILIN1Q9Y6C2 1016 aa12.92□□□□□ -0.34
PFDN1-207ENST00000524074 NOP9Q86U38 636 aaKnown RBP12.91□□□□□ -0.34
PFDN1-207ENST00000524074 EHBP1Q8NDI1 1231 aa12.91□□□□□ -0.34
PFDN1-207ENST00000524074 EDEM1Q92611 657 aa12.91□□□□□ -0.34
PFDN1-207ENST00000524074 CRELD1Q96HD1 420 aa12.91□□□□□ -0.34
PFDN1-207ENST00000524074 LNPKQ9C0E8 428 aa12.91□□□□□ -0.34
PFDN1-207ENST00000524074 RAB6BQ9NRW1 208 aa12.91□□□□□ -0.34
PFDN1-207ENST00000524074 NBPF15Q8N660 670 aa12.9□□□□□ -0.34
PFDN1-207ENST00000524074 ARMC5Q96C12 935 aa12.9□□□□□ -0.34
PFDN1-207ENST00000524074 FRMD6Q96NE9 622 aa12.9□□□□□ -0.34
PFDN1-207ENST00000524074 DNAJA1P31689 397 aaKnown RBP12.89□□□□□ -0.35
PFDN1-207ENST00000524074 SKOR1P84550 965 aa12.89□□□□□ -0.35
PFDN1-207ENST00000524074 TLR1Q15399 786 aa12.89□□□□□ -0.35
PFDN1-207ENST00000524074 FAM26DQ5JW98 314 aa12.89□□□□□ -0.35
PFDN1-207ENST00000524074 CDK15Q96Q40 435 aa12.89□□□□□ -0.35
PFDN1-207ENST00000524074 CSRNP1Q96S65 589 aa12.89□□□□□ -0.35
PFDN1-207ENST00000524074 ARHGEF10LQ9HCE6 1279 aa12.89□□□□□ -0.35
PFDN1-207ENST00000524074 IQSEC3Q9UPP2 1182 aaPredicted RBP12.89□□□□□ -0.35
PFDN1-207ENST00000524074 SERTM1A2A2V5 107 aa12.88□□□□□ -0.35
PFDN1-207ENST00000524074 CDK2AP1O14519 115 aa12.88□□□□□ -0.35
PFDN1-207ENST00000524074 PDGFAP04085 211 aa12.88□□□□□ -0.35
PFDN1-207ENST00000524074 PCSK2P16519 638 aa12.88□□□□□ -0.35
PFDN1-207ENST00000524074 TNNI2P48788 182 aa12.88□□□□□ -0.35
PFDN1-207ENST00000524074 CCDC116Q8IYX3 515 aa12.88□□□□□ -0.35
PFDN1-207ENST00000524074 ANKRD62A6NC57 917 aa12.87□□□□□ -0.35
PFDN1-207ENST00000524074 LILRA1O75019 489 aa12.87□□□□□ -0.35
PFDN1-207ENST00000524074 ZAP70P43403 619 aa12.87□□□□□ -0.35
PFDN1-207ENST00000524074 DGKZQ13574 1117 aa12.87□□□□□ -0.35
PFDN1-207ENST00000524074 C11orf91Q3C1V1 193 aa12.87□□□□□ -0.35
PFDN1-207ENST00000524074 INPP5FQ9Y2H2 1132 aa12.87□□□□□ -0.35
PFDN1-207ENST00000524074 AK5Q9Y6K8 562 aa12.87□□□□□ -0.35
PFDN1-207ENST00000524074 PPEF1O14829 653 aaPredicted RBP12.86□□□□□ -0.35
PFDN1-207ENST00000524074 PPP1R26Q5T8A7 1209 aaPredicted RBP12.86□□□□□ -0.35
PFDN1-207ENST00000524074 POTEAQ6S8J7 498 aa12.86□□□□□ -0.35
PFDN1-207ENST00000524074 ETFBKMTQ8IXQ9 262 aa12.86□□□□□ -0.35
PFDN1-207ENST00000524074 TTC16Q8NEE8 873 aa12.86□□□□□ -0.35
PFDN1-207ENST00000524074 XAGE2Q96GT9 111 aa12.86□□□□□ -0.35
PFDN1-207ENST00000524074 ZNF232Q9UNY5 417 aa12.86□□□□□ -0.35
PFDN1-207ENST00000524074 SPG7Q9UQ90 795 aa12.86□□□□□ -0.35
PFDN1-207ENST00000524074 TMA7Q9Y2S6 64 aaKnown RBP12.86□□□□□ -0.35
PFDN1-207ENST00000524074 USP3Q9Y6I4 520 aa12.86□□□□□ -0.35
PFDN1-207ENST00000524074 EML1O00423 815 aa12.85□□□□□ -0.35
PFDN1-207ENST00000524074 NEFLP07196 543 aa12.85□□□□□ -0.35
PFDN1-207ENST00000524074 RTN1Q16799 776 aa12.85□□□□□ -0.35
PFDN1-207ENST00000524074 ALDH16A1Q8IZ83 802 aa12.85□□□□□ -0.35
PFDN1-207ENST00000524074 GMLQ99445 158 aa12.85□□□□□ -0.35
PFDN1-207ENST00000524074 CFHR5Q9BXR6 569 aa12.85□□□□□ -0.35
PFDN1-207ENST00000524074 GRM5P41594 1212 aa12.84□□□□□ -0.35
PFDN1-207ENST00000524074 HIRAP54198 1017 aaPredicted RBP12.84□□□□□ -0.35
PFDN1-207ENST00000524074 PTPN5P54829 565 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms