RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 RC3H1Q5TC82 1133 aaKnown RBP16.76■□□□□ 0.27
VEGFA-224ENST00000523873 CCDC87Q9NVE4 849 aa16.76■□□□□ 0.27
VEGFA-224ENST00000523873 RPS6KA4O75676 772 aa16.75■□□□□ 0.27
VEGFA-224ENST00000523873 SNRPA1P09661 255 aaKnown RBP16.75■□□□□ 0.27
VEGFA-224ENST00000523873 CANXP27824 592 aaKnown RBP16.75■□□□□ 0.27
VEGFA-224ENST00000523873 CCDC27Q2M243 656 aa16.75■□□□□ 0.27
VEGFA-224ENST00000523873 MBIPQ9NS73 344 aa16.75■□□□□ 0.27
VEGFA-224ENST00000523873 ATF5Q9Y2D1 282 aaPredicted RBP16.75■□□□□ 0.27
VEGFA-224ENST00000523873 RTCBQ9Y3I0 505 aaKnown RBP16.75■□□□□ 0.27
VEGFA-224ENST00000523873 A1BGP04217 495 aa16.74■□□□□ 0.27
VEGFA-224ENST00000523873 SSFA2P28290 1259 aa16.74■□□□□ 0.27
VEGFA-224ENST00000523873 CFAP44Q96MT7 982 aa16.74■□□□□ 0.27
VEGFA-224ENST00000523873 GIGYF1O75420 1035 aaPredicted RBP16.73■□□□□ 0.27
VEGFA-224ENST00000523873 STARD3NLO95772 234 aa16.73■□□□□ 0.27
VEGFA-224ENST00000523873 ZNF853P0CG23 659 aa16.73■□□□□ 0.27
VEGFA-224ENST00000523873 HMGB2P26583 209 aaKnown RBP16.73■□□□□ 0.27
VEGFA-224ENST00000523873 MSL1Q68DK7 614 aa16.73■□□□□ 0.27
VEGFA-224ENST00000523873 IFT57Q9NWB7 429 aa16.73■□□□□ 0.27
VEGFA-224ENST00000523873 BABAM1Q9NWV8 329 aa16.73■□□□□ 0.27
VEGFA-224ENST00000523873 SOS1Q07889 1333 aaPredicted RBP16.72■□□□□ 0.27
VEGFA-224ENST00000523873 CALD1Q05682 793 aaKnown RBP16.72■□□□□ 0.27
VEGFA-224ENST00000523873 TRAPPC3LQ5T215 181 aa16.72■□□□□ 0.27
VEGFA-224ENST00000523873 ARHGEF1Q92888 912 aaKnown RBP16.72■□□□□ 0.27
VEGFA-224ENST00000523873 TEX13AQ9BXU3 409 aaPredicted RBP16.72■□□□□ 0.27
VEGFA-224ENST00000523873 ZNF330Q9Y3S2 320 aaPredicted RBP16.72■□□□□ 0.27
VEGFA-224ENST00000523873 BCORQ6W2J9 1755 aa16.72■□□□□ 0.27
VEGFA-224ENST00000523873 GNAI1P63096 354 aa16.71■□□□□ 0.27
VEGFA-224ENST00000523873 FLAD1Q8NFF5 587 aa16.71■□□□□ 0.27
VEGFA-224ENST00000523873 TSR2Q969E8 191 aaKnown RBP16.71■□□□□ 0.27
VEGFA-224ENST00000523873 MTFR1LQ9H019 292 aa16.71■□□□□ 0.27
VEGFA-224ENST00000523873 SRP68Q9UHB9 627 aaKnown RBP16.71■□□□□ 0.27
VEGFA-224ENST00000523873 SCN7AQ01118 1682 aa16.7■□□□□ 0.26
VEGFA-224ENST00000523873 COL15A1P39059 1388 aa16.7■□□□□ 0.26
VEGFA-224ENST00000523873 NCBP3Q53F19 620 aaKnown RBP16.7■□□□□ 0.26
VEGFA-224ENST00000523873 NECTIN2Q92692 538 aa16.7■□□□□ 0.26
VEGFA-224ENST00000523873 NBPF26B4DH59 902 aa16.69■□□□□ 0.26
VEGFA-224ENST00000523873 EIF2S2P20042 333 aaKnown RBP16.69■□□□□ 0.26
VEGFA-224ENST00000523873 NBPF10Q6P3W6 841 aaKnown RBP16.69■□□□□ 0.26
VEGFA-224ENST00000523873 NBPF15Q8N660 670 aa16.69■□□□□ 0.26
VEGFA-224ENST00000523873 SPON1Q9HCB6 807 aa16.69■□□□□ 0.26
VEGFA-224ENST00000523873 SPINK5Q9NQ38 1064 aaPredicted RBP16.69■□□□□ 0.26
VEGFA-224ENST00000523873 NUP98P52948 1817 aa16.68■□□□□ 0.26
VEGFA-224ENST00000523873 RFC4P35249 363 aa16.68■□□□□ 0.26
VEGFA-224ENST00000523873 PTGER2P43116 358 aa16.68■□□□□ 0.26
VEGFA-224ENST00000523873 SLC16A10Q8TF71 515 aa16.68■□□□□ 0.26
VEGFA-224ENST00000523873 ELL2O00472 640 aaPredicted RBP16.67■□□□□ 0.26
VEGFA-224ENST00000523873 ADRA2BP18089 450 aa16.67■□□□□ 0.26
VEGFA-224ENST00000523873 EIF5P55010 431 aaKnown RBP16.67■□□□□ 0.26
VEGFA-224ENST00000523873 WDR63Q8IWG1 891 aa16.67■□□□□ 0.26
VEGFA-224ENST00000523873 AFDNP55196 1824 aaKnown RBP16.67■□□□□ 0.26
VEGFA-224ENST00000523873 IL16Q14005 1332 aa16.67■□□□□ 0.26
VEGFA-224ENST00000523873 ZNF521Q96K83 1311 aa16.67■□□□□ 0.26
VEGFA-224ENST00000523873 IL6STP40189 918 aaPredicted RBP16.66■□□□□ 0.26
VEGFA-224ENST00000523873 DUSP27Q5VZP5 1158 aa16.66■□□□□ 0.26
VEGFA-224ENST00000523873 NGEFQ8N5V2 710 aa16.66■□□□□ 0.26
VEGFA-224ENST00000523873 C8orf58Q8NAV2 365 aa16.66■□□□□ 0.26
VEGFA-224ENST00000523873 SGIP1Q9BQI5 828 aa16.66■□□□□ 0.26
VEGFA-224ENST00000523873 TBC1D2BQ9UPU7 963 aa16.66■□□□□ 0.26
VEGFA-224ENST00000523873 USP42Q9H9J4 1324 aaKnown RBP16.66■□□□□ 0.26
VEGFA-224ENST00000523873 FANCIQ9NVI1 1328 aa16.66■□□□□ 0.26
VEGFA-224ENST00000523873 ANXA1P04083 346 aa16.65■□□□□ 0.26
VEGFA-224ENST00000523873 GYS1P13807 737 aa16.65■□□□□ 0.26
VEGFA-224ENST00000523873 MYL6BP14649 208 aa16.65■□□□□ 0.26
VEGFA-224ENST00000523873 USPL1Q5W0Q7 1092 aa16.65■□□□□ 0.26
VEGFA-224ENST00000523873 TSPYL6Q8N831 410 aa16.65■□□□□ 0.26
VEGFA-224ENST00000523873 ARXQ96QS3 562 aa16.65■□□□□ 0.26
VEGFA-224ENST00000523873 PROSER3Q2NL68 480 aa16.64■□□□□ 0.25
VEGFA-224ENST00000523873 ZPR1O75312 459 aa16.63■□□□□ 0.25
VEGFA-224ENST00000523873 FKBP8Q14318 412 aa16.63■□□□□ 0.25
VEGFA-224ENST00000523873 PDIA6Q15084 440 aa16.63■□□□□ 0.25
VEGFA-224ENST00000523873 BCL2L12Q9HB09 334 aa16.63■□□□□ 0.25
VEGFA-224ENST00000523873 NARFQ9UHQ1 456 aa16.63■□□□□ 0.25
VEGFA-224ENST00000523873 CACNA1FO60840 1977 aa16.62■□□□□ 0.25
VEGFA-224ENST00000523873 HDGFL1Q5TGJ6 251 aa16.62■□□□□ 0.25
VEGFA-224ENST00000523873 DZIP3Q86Y13 1208 aaKnown RBP16.62■□□□□ 0.25
VEGFA-224ENST00000523873 CDCA7LQ96GN5 454 aa16.62■□□□□ 0.25
VEGFA-224ENST00000523873 PPP1R1BQ9UD71 204 aaPredicted RBP16.62■□□□□ 0.25
VEGFA-224ENST00000523873 ANKRD36CQ5JPF3 1778 aa16.61■□□□□ 0.25
VEGFA-224ENST00000523873 A0A087WZG4 1122 aa16.61■□□□□ 0.25
VEGFA-224ENST00000523873 POLD1P28340 1107 aa16.61■□□□□ 0.25
VEGFA-224ENST00000523873 HNRNPUQ00839 825 aaKnown RBP eCLIP16.61■□□□□ 0.258e-7■□□□□ 10.9
VEGFA-224ENST00000523873 EXOSC9Q06265 439 aaKnown RBP16.61■□□□□ 0.25
VEGFA-224ENST00000523873 CHPF2Q9P2E5 772 aa16.61■□□□□ 0.25
VEGFA-224ENST00000523873 ARFGEF2Q9Y6D5 1785 aa16.6■□□□□ 0.25
VEGFA-224ENST00000523873 TCERG1O14776 1098 aaKnown RBP16.6■□□□□ 0.25
VEGFA-224ENST00000523873 CAMTA2O94983 1202 aa16.6■□□□□ 0.25
VEGFA-224ENST00000523873 MMP10P09238 476 aa16.6■□□□□ 0.25
VEGFA-224ENST00000523873 HOXB7P09629 217 aa16.6■□□□□ 0.25
VEGFA-224ENST00000523873 GOLGA2Q08379 1002 aa16.6■□□□□ 0.25
VEGFA-224ENST00000523873 TTLL7Q6ZT98 887 aa16.6■□□□□ 0.25
VEGFA-224ENST00000523873 LRP10Q7Z4F1 713 aa16.6■□□□□ 0.25
VEGFA-224ENST00000523873 NPM2Q86SE8 214 aaKnown RBP16.6■□□□□ 0.25
VEGFA-224ENST00000523873 KLHL34Q8N239 644 aa16.6■□□□□ 0.25
VEGFA-224ENST00000523873 ERBB4Q15303 1308 aa16.6■□□□□ 0.25
VEGFA-224ENST00000523873 KIF13BQ9NQT8 1826 aa16.59■□□□□ 0.25
VEGFA-224ENST00000523873 TWISTNBQ3B726 338 aaPredicted RBP16.59■□□□□ 0.25
VEGFA-224ENST00000523873 BICDL1Q6ZP65 573 aa16.59■□□□□ 0.25
VEGFA-224ENST00000523873 NLGN1Q8N2Q7 840 aa16.59■□□□□ 0.25
VEGFA-224ENST00000523873 MYH16Q9H6N6 1097 aa16.59■□□□□ 0.25
VEGFA-224ENST00000523873 DDR1Q08345 913 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms