RNA–Protein interactions for RNA: ENST00000523814.5

SPIDR-221, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 802 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-221ENST00000523814 VIRMAQ69YN4 1812 aaKnown RBP22.52■■□□□ 1.2
SPIDR-221ENST00000523814 POLRMTO00411 1230 aaKnown RBP22.52■■□□□ 1.2
SPIDR-221ENST00000523814 STARD3NLO95772 234 aa22.52■■□□□ 1.2
SPIDR-221ENST00000523814 PRKAR2BP31323 418 aa22.52■■□□□ 1.2
SPIDR-221ENST00000523814 ZNF496Q96IT1 587 aaPredicted RBP22.52■■□□□ 1.2
SPIDR-221ENST00000523814 GPBP1L1Q9HC44 474 aaPredicted RBP22.52■■□□□ 1.2
SPIDR-221ENST00000523814 N4BP2Q86UW6 1770 aaPredicted RBP22.52■■□□□ 1.2
SPIDR-221ENST00000523814 TEX13AQ9BXU3 409 aaPredicted RBP22.51■■□□□ 1.19
SPIDR-221ENST00000523814 CEMIPQ8WUJ3 1361 aa22.5■■□□□ 1.19
SPIDR-221ENST00000523814 FCHSD2O94868 740 aa22.5■■□□□ 1.19
SPIDR-221ENST00000523814 PIM2Q9P1W9 311 aa22.5■■□□□ 1.19
SPIDR-221ENST00000523814 UBR2Q8IWV8 1755 aa22.5■■□□□ 1.19
SPIDR-221ENST00000523814 COL15A1P39059 1388 aa22.5■■□□□ 1.19
SPIDR-221ENST00000523814 SENP3-EIF4A1A0A087X0R7 540 aa22.49■■□□□ 1.19
SPIDR-221ENST00000523814 EIF5P55010 431 aaKnown RBP22.49■■□□□ 1.19
SPIDR-221ENST00000523814 U2AF1L5P0DN76 240 aaPredicted RBP22.48■■□□□ 1.19
SPIDR-221ENST00000523814 CANXP27824 592 aaKnown RBP22.48■■□□□ 1.19
SPIDR-221ENST00000523814 U2AF1Q01081 240 aaKnown RBP eCLIP22.48■■□□□ 1.19
SPIDR-221ENST00000523814 NFIXQ14938 502 aa22.48■■□□□ 1.19
SPIDR-221ENST00000523814 ARHGAP27Q6ZUM4 889 aa22.48■■□□□ 1.19
SPIDR-221ENST00000523814 BCL2L12Q9HB09 334 aa22.48■■□□□ 1.19
SPIDR-221ENST00000523814 HEG1Q9ULI3 1381 aa22.48■■□□□ 1.19
SPIDR-221ENST00000523814 A0A087WZG4 1122 aa22.46■■□□□ 1.19
SPIDR-221ENST00000523814 DALRD3Q5D0E6 543 aaKnown RBP22.46■■□□□ 1.19
SPIDR-221ENST00000523814 ZNF526Q8TF50 670 aaPredicted RBP22.46■■□□□ 1.19
SPIDR-221ENST00000523814 FMNL2Q96PY5 1086 aa22.46■■□□□ 1.19
SPIDR-221ENST00000523814 BTBD11A6QL63 1104 aa22.44■■□□□ 1.18
SPIDR-221ENST00000523814 SIPA1L3O60292 1781 aaPredicted RBP22.44■■□□□ 1.18
SPIDR-221ENST00000523814 CHRNA5P30532 468 aa22.44■■□□□ 1.18
SPIDR-221ENST00000523814 BRCA1P38398 1863 aaKnown RBP22.44■■□□□ 1.18
SPIDR-221ENST00000523814 KCNQ3O43525 872 aa22.43■■□□□ 1.18
SPIDR-221ENST00000523814 SERPINB2P05120 415 aa22.43■■□□□ 1.18
SPIDR-221ENST00000523814 HTATSF1O43719 755 aaKnown RBP22.42■■□□□ 1.18
SPIDR-221ENST00000523814 IL6STP40189 918 aaPredicted RBP22.42■■□□□ 1.18
SPIDR-221ENST00000523814 RTF1Q92541 710 aaKnown RBP22.41■■□□□ 1.18
SPIDR-221ENST00000523814 A1BGP04217 495 aa22.4■■□□□ 1.18
SPIDR-221ENST00000523814 MCM10Q7L590 875 aa22.4■■□□□ 1.18
SPIDR-221ENST00000523814 NRXN2Q9P2S2 1712 aa22.38■■□□□ 1.17
SPIDR-221ENST00000523814 KIF3CO14782 793 aa22.38■■□□□ 1.17
SPIDR-221ENST00000523814 TBC1D2BQ9UPU7 963 aa22.38■■□□□ 1.17
SPIDR-221ENST00000523814 ARFGEF1Q9Y6D6 1849 aa22.38■■□□□ 1.17
SPIDR-221ENST00000523814 C9orf131Q5VYM1 1079 aa22.37■■□□□ 1.17
SPIDR-221ENST00000523814 BICDL1Q6ZP65 573 aa22.37■■□□□ 1.17
SPIDR-221ENST00000523814 USP16Q9Y5T5 823 aa22.37■■□□□ 1.17
SPIDR-221ENST00000523814 TBC1D9BQ66K14 1250 aa22.36■■□□□ 1.17
SPIDR-221ENST00000523814 AFDNP55196 1824 aaKnown RBP22.36■■□□□ 1.17
SPIDR-221ENST00000523814 SNRPA1P09661 255 aaKnown RBP22.35■■□□□ 1.17
SPIDR-221ENST00000523814 DCTN1Q14203 1278 aa22.35■■□□□ 1.17
SPIDR-221ENST00000523814 ZNF330Q9Y3S2 320 aaPredicted RBP22.35■■□□□ 1.17
SPIDR-221ENST00000523814 H0YIN7 160 aa22.34■■□□□ 1.17
SPIDR-221ENST00000523814 CAMTA2O94983 1202 aa22.34■■□□□ 1.17
SPIDR-221ENST00000523814 TAF7Q15545 349 aaPredicted RBP22.34■■□□□ 1.17
SPIDR-221ENST00000523814 NPM2Q86SE8 214 aaKnown RBP22.34■■□□□ 1.17
SPIDR-221ENST00000523814 C2CD5Q86YS7 1000 aa22.34■■□□□ 1.17
SPIDR-221ENST00000523814 TTLL6Q8N841 843 aa22.33■■□□□ 1.17
SPIDR-221ENST00000523814 BRIP1Q9BX63 1249 aa22.33■■□□□ 1.17
SPIDR-221ENST00000523814 PRAMEF22A3QJZ6 481 aa22.32■■□□□ 1.16
SPIDR-221ENST00000523814 HSPA6P17066 643 aa22.32■■□□□ 1.16
SPIDR-221ENST00000523814 PLEKHF1Q96S99 279 aa22.32■■□□□ 1.16
SPIDR-221ENST00000523814 CARMIL3Q8ND23 1372 aa22.31■■□□□ 1.16
SPIDR-221ENST00000523814 NEFMP07197 916 aa22.31■■□□□ 1.16
SPIDR-221ENST00000523814 SETDB2Q96T68 719 aa22.31■■□□□ 1.16
SPIDR-221ENST00000523814 PDZRN3Q9UPQ7 1066 aa22.31■■□□□ 1.16
SPIDR-221ENST00000523814 PRR5LQ6MZQ0 368 aa22.3■■□□□ 1.16
SPIDR-221ENST00000523814 DZIP3Q86Y13 1208 aaKnown RBP22.3■■□□□ 1.16
SPIDR-221ENST00000523814 RNF181Q9P0P0 153 aa22.3■■□□□ 1.16
SPIDR-221ENST00000523814 TOMM70O94826 608 aa22.29■■□□□ 1.16
SPIDR-221ENST00000523814 PDE6BP35913 854 aa22.29■■□□□ 1.16
SPIDR-221ENST00000523814 CLEC4GQ6UXB4 293 aa22.29■■□□□ 1.16
SPIDR-221ENST00000523814 NMRK2Q9NPI5 230 aa22.29■■□□□ 1.16
SPIDR-221ENST00000523814 CEP350Q5VT06 3117 aa22.28■■□□□ 1.16
SPIDR-221ENST00000523814 SCN7AQ01118 1682 aa22.28■■□□□ 1.16
SPIDR-221ENST00000523814 PIP4K2AP48426 406 aaPredicted RBP22.28■■□□□ 1.16
SPIDR-221ENST00000523814 PNNQ9H307 717 aaKnown RBP22.28■■□□□ 1.16
SPIDR-221ENST00000523814 MIS18AQ9NYP9 233 aa22.28■■□□□ 1.16
SPIDR-221ENST00000523814 NBPF26B4DH59 902 aa22.27■■□□□ 1.16
SPIDR-221ENST00000523814 NFE2L2Q16236 605 aa22.27■■□□□ 1.16
SPIDR-221ENST00000523814 NBPF10Q6P3W6 841 aaKnown RBP22.27■■□□□ 1.16
SPIDR-221ENST00000523814 NBPF15Q8N660 670 aa22.27■■□□□ 1.16
SPIDR-221ENST00000523814 DLEC1Q9Y238 1755 aa22.26■■□□□ 1.15
SPIDR-221ENST00000523814 RGL2O15211 777 aa22.26■■□□□ 1.15
SPIDR-221ENST00000523814 PNISRQ8TF01 805 aaKnown RBP22.26■■□□□ 1.15
SPIDR-221ENST00000523814 KDM2BQ8NHM5 1336 aa22.26■■□□□ 1.15
SPIDR-221ENST00000523814 LMNB1P20700 586 aa22.25■■□□□ 1.15
SPIDR-221ENST00000523814 CCDC24Q8N4L8 307 aa22.25■■□□□ 1.15
SPIDR-221ENST00000523814 CNBD1Q8NA66 436 aa22.25■■□□□ 1.15
SPIDR-221ENST00000523814 PRELPP51888 382 aa22.24■■□□□ 1.15
SPIDR-221ENST00000523814 RASSF7Q02833 373 aa22.24■■□□□ 1.15
SPIDR-221ENST00000523814 RALBP1Q15311 655 aa22.24■■□□□ 1.15
SPIDR-221ENST00000523814 ZNF622Q969S3 477 aaKnown RBP eCLIP22.24■■□□□ 1.152e-7■□□□□ 8.8
SPIDR-221ENST00000523814 ZNF652Q9Y2D9 606 aa22.24■■□□□ 1.15
SPIDR-221ENST00000523814 ZC3H4Q9UPT8 1303 aaKnown RBP22.24■■□□□ 1.15
SPIDR-221ENST00000523814 SBF1O95248 1867 aa22.24■■□□□ 1.15
SPIDR-221ENST00000523814 ANKRD31Q8N7Z5 1873 aa22.22■■□□□ 1.15
SPIDR-221ENST00000523814 ST5P78524 1137 aa22.22■■□□□ 1.15
SPIDR-221ENST00000523814 NFKBIEO00221 500 aa22.21■■□□□ 1.15
SPIDR-221ENST00000523814 NPHP1O15259 732 aa22.21■■□□□ 1.15
SPIDR-221ENST00000523814 EIF4A1P60842 406 aaKnown RBP22.21■■□□□ 1.15
SPIDR-221ENST00000523814 STYK1Q6J9G0 422 aa22.21■■□□□ 1.15
SPIDR-221ENST00000523814 RBM46Q8TBY0 533 aaKnown RBP22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms