RNA–Protein interactions for RNA: ENST00000523288.5

FAM49B-225, Transcript of family with sequence similarity 49 member B, human

TSL 2

Gene FAM49B, Length 4,552 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM49B-225	ENST00000523288	PRIM1	P49642	420 aa	Known RBP	4.56	□□□□□ -1.68
FAM49B-225	ENST00000523288	RWDD1	Q9H446	243 aa	Predicted RBP	4.56	□□□□□ -1.68
FAM49B-225	ENST00000523288	DDX49	Q9Y6V7	483 aa	Known RBP	4.56	□□□□□ -1.68
FAM49B-225	ENST00000523288	DUOX2	Q9NRD8	1548 aa		4.56	□□□□□ -1.68
FAM49B-225	ENST00000523288	MINK1	Q8N4C8	1332 aa	Predicted RBP	4.56	□□□□□ -1.68
FAM49B-225	ENST00000523288	KIAA0586	Q9BVV6	1533 aa		4.56	□□□□□ -1.68
FAM49B-225	ENST00000523288	IPO7	O95373	1038 aa	Known RBP	4.56	□□□□□ -1.68
FAM49B-225	ENST00000523288	CT47B1	P0C2W7	299 aa	Predicted RBP	4.56	□□□□□ -1.68
FAM49B-225	ENST00000523288	KCNJ6	P48051	423 aa		4.56	□□□□□ -1.68
FAM49B-225	ENST00000523288	L3MBTL2	Q969R5	705 aa		4.56	□□□□□ -1.68
FAM49B-225	ENST00000523288	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	4.56	□□□□□ -1.68
FAM49B-225	ENST00000523288	GLI2	P10070	1586 aa		4.56	□□□□□ -1.68
FAM49B-225	ENST00000523288	HECW2	Q9P2P5	1572 aa		4.56	□□□□□ -1.68
FAM49B-225	ENST00000523288	SETD1A	O15047	1707 aa	Known RBP	4.56	□□□□□ -1.68
FAM49B-225	ENST00000523288	CORO7	P57737	925 aa		4.56	□□□□□ -1.68
FAM49B-225	ENST00000523288	ADCY2	Q08462	1091 aa		4.56	□□□□□ -1.68
FAM49B-225	ENST00000523288	ZSCAN26	Q16670	478 aa		4.56	□□□□□ -1.68
FAM49B-225	ENST00000523288	NBPF8	Q3BBV2	869 aa		4.56	□□□□□ -1.68
FAM49B-225	ENST00000523288	CERS3	Q8IU89	383 aa		4.56	□□□□□ -1.68
FAM49B-225	ENST00000523288	AEBP1	Q8IUX7	1158 aa		4.56	□□□□□ -1.68
FAM49B-225	ENST00000523288	GPT2	Q8TD30	523 aa		4.56	□□□□□ -1.68
FAM49B-225	ENST00000523288	STK31	Q9BXU1	1019 aa		4.56	□□□□□ -1.68
FAM49B-225	ENST00000523288	SPHKAP	Q2M3C7	1700 aa		4.56	□□□□□ -1.68
FAM49B-225	ENST00000523288	CHD2	O14647	1828 aa	Known RBP	4.56	□□□□□ -1.68
FAM49B-225	ENST00000523288	ZRANB2	O95218	330 aa	Known RBP eCLIP	4.56	□□□□□ -1.68
FAM49B-225	ENST00000523288	C1orf141	Q5JVX7	400 aa		4.56	□□□□□ -1.68
FAM49B-225	ENST00000523288	ERC1	Q8IUD2	1116 aa		4.56	□□□□□ -1.68
FAM49B-225	ENST00000523288	TATDN2	Q93075	761 aa		4.56	□□□□□ -1.68
FAM49B-225	ENST00000523288	RRP15	Q9Y3B9	282 aa	Known RBP	4.56	□□□□□ -1.68
FAM49B-225	ENST00000523288	FHOD1	Q9Y613	1164 aa		4.56	□□□□□ -1.68
FAM49B-225	ENST00000523288	DAPK1	P53355	1430 aa		4.56	□□□□□ -1.68
FAM49B-225	ENST00000523288	HTATSF1	O43719	755 aa	Known RBP	4.55	□□□□□ -1.68
FAM49B-225	ENST00000523288	ZC3H12A	Q5D1E8	599 aa	Known RBP	4.55	□□□□□ -1.68
FAM49B-225	ENST00000523288	TXNDC2	Q86VQ3	553 aa		4.55	□□□□□ -1.68
FAM49B-225	ENST00000523288	FMNL3	Q8IVF7	1028 aa		4.55	□□□□□ -1.68
FAM49B-225	ENST00000523288	AK7	Q96M32	723 aa		4.55	□□□□□ -1.68
FAM49B-225	ENST00000523288	KIF2C	Q99661	725 aa		4.55	□□□□□ -1.68
FAM49B-225	ENST00000523288	ETAA1	Q9NY74	926 aa		4.55	□□□□□ -1.68
FAM49B-225	ENST00000523288	MED14	O60244	1454 aa		4.55	□□□□□ -1.68
FAM49B-225	ENST00000523288	NBPF19	A0A087WUL8	3843 aa		4.55	□□□□□ -1.68
FAM49B-225	ENST00000523288	PREX2	Q70Z35	1606 aa		4.55	□□□□□ -1.68
FAM49B-225	ENST00000523288	SYT10	Q6XYQ8	523 aa		4.55	□□□□□ -1.68
FAM49B-225	ENST00000523288	MAGEC3	Q8TD91	643 aa		4.55	□□□□□ -1.68
FAM49B-225	ENST00000523288	TSPAN18	Q96SJ8	248 aa		4.55	□□□□□ -1.68
FAM49B-225	ENST00000523288	SSH2	Q76I76	1423 aa		4.55	□□□□□ -1.68
FAM49B-225	ENST00000523288	IQGAP3	Q86VI3	1631 aa		4.55	□□□□□ -1.68
FAM49B-225	ENST00000523288	MPHOSPH10	O00566	681 aa	Known RBP	4.55	□□□□□ -1.68
FAM49B-225	ENST00000523288	PER1	O15534	1290 aa	Predicted RBP	4.55	□□□□□ -1.68
FAM49B-225	ENST00000523288	RBM6	P78332	1123 aa	Known RBP	4.55	□□□□□ -1.68
FAM49B-225	ENST00000523288	NUTM2G	Q5VZR2	741 aa		4.55	□□□□□ -1.68
FAM49B-225	ENST00000523288	TTC5	Q8N0Z6	440 aa		4.55	□□□□□ -1.68
FAM49B-225	ENST00000523288	TCP11	Q8WWU5	503 aa		4.55	□□□□□ -1.68
FAM49B-225	ENST00000523288	STRN4	Q9NRL3	753 aa		4.55	□□□□□ -1.68
FAM49B-225	ENST00000523288	NLRP2	Q9NX02	1062 aa		4.55	□□□□□ -1.68
FAM49B-225	ENST00000523288	TBC1D2B	Q9UPU7	963 aa		4.55	□□□□□ -1.68
FAM49B-225	ENST00000523288	NUB1	Q9Y5A7	615 aa		4.55	□□□□□ -1.68
FAM49B-225	ENST00000523288	CRYBG1	Q9Y4K1	1723 aa		4.55	□□□□□ -1.68
FAM49B-225	ENST00000523288	ASXL1	Q8IXJ9	1541 aa		4.55	□□□□□ -1.68
FAM49B-225	ENST00000523288	MAP2K2	P36507	400 aa		4.55	□□□□□ -1.68
FAM49B-225	ENST00000523288	MAGEA8	P43361	318 aa		4.55	□□□□□ -1.68
FAM49B-225	ENST00000523288	MRPL12	P52815	198 aa	Known RBP	4.55	□□□□□ -1.68
FAM49B-225	ENST00000523288	GRIK3	Q13003	919 aa		4.55	□□□□□ -1.68
FAM49B-225	ENST00000523288	TRAF1	Q13077	416 aa		4.55	□□□□□ -1.68
FAM49B-225	ENST00000523288	PDCD2	Q16342	344 aa	Predicted RBP	4.55	□□□□□ -1.68
FAM49B-225	ENST00000523288	SLC5A9	Q2M3M2	681 aa		4.55	□□□□□ -1.68
FAM49B-225	ENST00000523288	KMT5B	Q4FZB7	885 aa		4.55	□□□□□ -1.68
FAM49B-225	ENST00000523288	ANKRD18A	Q8IVF6	992 aa		4.55	□□□□□ -1.68
FAM49B-225	ENST00000523288	NBPF15	Q8N660	670 aa		4.55	□□□□□ -1.68
FAM49B-225	ENST00000523288	ANKRD20A12P	Q8NF67	263 aa		4.55	□□□□□ -1.68
FAM49B-225	ENST00000523288	FBXW7	Q969H0	707 aa		4.55	□□□□□ -1.68
FAM49B-225	ENST00000523288	MMTAG2	Q9BU76	263 aa	Known RBP	4.55	□□□□□ -1.68
FAM49B-225	ENST00000523288	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	4.55	□□□□□ -1.68
FAM49B-225	ENST00000523288	ANKRD26	Q9UPS8	1709 aa		4.54	□□□□□ -1.68
FAM49B-225	ENST00000523288	ARAP3	Q8WWN8	1544 aa		4.54	□□□□□ -1.68
FAM49B-225	ENST00000523288	MAGI2	Q86UL8	1455 aa		4.54	□□□□□ -1.68
FAM49B-225	ENST00000523288	ERBB3	P21860	1342 aa		4.54	□□□□□ -1.68
FAM49B-225	ENST00000523288	SASH1	O94885	1247 aa		4.54	□□□□□ -1.68
FAM49B-225	ENST00000523288	INHBE	P58166	350 aa		4.54	□□□□□ -1.68
FAM49B-225	ENST00000523288	TEF	Q10587	303 aa		4.54	□□□□□ -1.68
FAM49B-225	ENST00000523288	COG3	Q96JB2	828 aa		4.54	□□□□□ -1.68
FAM49B-225	ENST00000523288	MPHOSPH9	Q99550	1183 aa		4.54	□□□□□ -1.68
FAM49B-225	ENST00000523288	L2HGDH	Q9H9P8	463 aa		4.54	□□□□□ -1.68
FAM49B-225	ENST00000523288	ANAPC4	Q9UJX5	808 aa		4.54	□□□□□ -1.68
FAM49B-225	ENST00000523288	KDM5A	P29375	1690 aa	Known RBP	4.54	□□□□□ -1.68
FAM49B-225	ENST00000523288	KDM4A	O75164	1064 aa		4.54	□□□□□ -1.68
FAM49B-225	ENST00000523288	PDIA5	Q14554	519 aa		4.54	□□□□□ -1.68
FAM49B-225	ENST00000523288	CRYM	Q14894	314 aa		4.54	□□□□□ -1.68
FAM49B-225	ENST00000523288	PACS2	Q86VP3	889 aa		4.54	□□□□□ -1.68
FAM49B-225	ENST00000523288	KLHL23	Q8NBE8	558 aa		4.54	□□□□□ -1.68
FAM49B-225	ENST00000523288	MADD	Q8WXG6	1647 aa		4.54	□□□□□ -1.68
FAM49B-225	ENST00000523288	ITSN1	Q15811	1721 aa		4.54	□□□□□ -1.68
FAM49B-225	ENST00000523288	IFT172	Q9UG01	1749 aa		4.54	□□□□□ -1.68
FAM49B-225	ENST00000523288	ARID4A	P29374	1257 aa	Predicted RBP	4.54	□□□□□ -1.68
FAM49B-225	ENST00000523288	ESCO1	Q5FWF5	840 aa		4.54	□□□□□ -1.68
FAM49B-225	ENST00000523288	LEKR1	Q6ZMV7	388 aa		4.54	□□□□□ -1.68
FAM49B-225	ENST00000523288	RBM42	Q9BTD8	480 aa	Known RBP	4.54	□□□□□ -1.68
FAM49B-225	ENST00000523288	KCNF1	Q9H3M0	494 aa		4.54	□□□□□ -1.68
FAM49B-225	ENST00000523288	MCM8	Q9UJA3	840 aa		4.54	□□□□□ -1.68
FAM49B-225	ENST00000523288	TTC37	Q6PGP7	1564 aa		4.53	□□□□□ -1.68
FAM49B-225	ENST00000523288		A0A087WUV0	522 aa	Predicted RBP	4.53	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 29 ms