RNA–Protein interactions for RNA: ENST00000522887.1

EIF3E-216, Transcript of eukaryotic translation initiation factor 3 subunit E, human

TSL 4

Gene EIF3E, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EIF3E-216	ENST00000522887	PPP1R15A	O75807	674 aa	Predicted RBP	9.74	□□□□□ -0.85
EIF3E-216	ENST00000522887	CCDC82	Q8N4S0	544 aa		9.74	□□□□□ -0.85
EIF3E-216	ENST00000522887	PURB	Q96QR8	312 aa	Known RBP	9.74	□□□□□ -0.85
EIF3E-216	ENST00000522887	MAN1A2	O60476	641 aa		9.73	□□□□□ -0.85
EIF3E-216	ENST00000522887	ADD1	P35611	737 aa	Known RBP	9.73	□□□□□ -0.85
EIF3E-216	ENST00000522887	CBLB	Q13191	982 aa		9.73	□□□□□ -0.85
EIF3E-216	ENST00000522887	CLN3	Q13286	438 aa		9.73	□□□□□ -0.85
EIF3E-216	ENST00000522887	LARGE2	Q8N3Y3	721 aa		9.73	□□□□□ -0.85
EIF3E-216	ENST00000522887	FAM196B	A6NMK8	535 aa		9.72	□□□□□ -0.85
EIF3E-216	ENST00000522887	LMOD1	P29536	600 aa	Predicted RBP	9.72	□□□□□ -0.85
EIF3E-216	ENST00000522887	GTF2I	P78347	998 aa		9.72	□□□□□ -0.85
EIF3E-216	ENST00000522887	TSGA10IP	Q3SY00	556 aa		9.72	□□□□□ -0.85
EIF3E-216	ENST00000522887	PBXIP1	Q96AQ6	731 aa		9.72	□□□□□ -0.85
EIF3E-216	ENST00000522887	C1orf115	Q9H7X2	142 aa		9.72	□□□□□ -0.85
EIF3E-216	ENST00000522887	VRTN	Q9H8Y1	702 aa		9.72	□□□□□ -0.85
EIF3E-216	ENST00000522887	MKRN1	Q9UHC7	482 aa	Known RBP	9.72	□□□□□ -0.85
EIF3E-216	ENST00000522887	COL17A1	Q9UMD9	1497 aa	Predicted RBP	9.72	□□□□□ -0.85
EIF3E-216	ENST00000522887		M0R2N6	131 aa		9.71	□□□□□ -0.86
EIF3E-216	ENST00000522887	SIX5	Q8N196	739 aa		9.71	□□□□□ -0.86
EIF3E-216	ENST00000522887	PCDHGA11	Q9Y5H2	935 aa		9.71	□□□□□ -0.86
EIF3E-216	ENST00000522887	IGHA1	P01876	353 aa		9.7	□□□□□ -0.86
EIF3E-216	ENST00000522887	BMP2	P12643	396 aa		9.7	□□□□□ -0.86
EIF3E-216	ENST00000522887	GSK3A	P49840	483 aa		9.7	□□□□□ -0.86
EIF3E-216	ENST00000522887	MLEC	Q14165	292 aa		9.7	□□□□□ -0.86
EIF3E-216	ENST00000522887	ELOA	Q14241	798 aa	Known RBP	9.7	□□□□□ -0.86
EIF3E-216	ENST00000522887	KANK4	Q5T7N3	995 aa	Predicted RBP	9.7	□□□□□ -0.86
EIF3E-216	ENST00000522887	RBM19	Q9Y4C8	960 aa	Known RBP	9.7	□□□□□ -0.86
EIF3E-216	ENST00000522887	RAPGEF6	Q8TEU7	1601 aa		9.7	□□□□□ -0.86
EIF3E-216	ENST00000522887	FMN1	Q68DA7	1419 aa		9.69	□□□□□ -0.86
EIF3E-216	ENST00000522887	GPAT2	Q6NUI2	795 aa		9.69	□□□□□ -0.86
EIF3E-216	ENST00000522887	LARP1	Q6PKG0	1096 aa	Known RBP	9.69	□□□□□ -0.86
EIF3E-216	ENST00000522887	KDF1	Q8NAX2	398 aa	Predicted RBP	9.69	□□□□□ -0.86
EIF3E-216	ENST00000522887	ESYT1	Q9BSJ8	1104 aa		9.69	□□□□□ -0.86
EIF3E-216	ENST00000522887	DNAAF2	Q9NVR5	837 aa	Known RBP	9.69	□□□□□ -0.86
EIF3E-216	ENST00000522887	KIF21B	O75037	1637 aa		9.68	□□□□□ -0.86
EIF3E-216	ENST00000522887	MAGI3	Q5TCQ9	1506 aa		9.68	□□□□□ -0.86
EIF3E-216	ENST00000522887	NUP153	P49790	1475 aa	Known RBP	9.68	□□□□□ -0.86
EIF3E-216	ENST00000522887	SOBP	A7XYQ1	873 aa		9.68	□□□□□ -0.86
EIF3E-216	ENST00000522887	BACH1	O14867	736 aa		9.68	□□□□□ -0.86
EIF3E-216	ENST00000522887	RNF144A	P50876	292 aa	Predicted RBP	9.68	□□□□□ -0.86
EIF3E-216	ENST00000522887	EFCAB2	Q5VUJ9	269 aa		9.68	□□□□□ -0.86
EIF3E-216	ENST00000522887	DEPDC4	Q8N2C3	294 aa		9.68	□□□□□ -0.86
EIF3E-216	ENST00000522887	OGFOD1	Q8N543	542 aa		9.68	□□□□□ -0.86
EIF3E-216	ENST00000522887	XAGE2	Q96GT9	111 aa		9.68	□□□□□ -0.86
EIF3E-216	ENST00000522887	MAP3K4	Q9Y6R4	1608 aa		9.67	□□□□□ -0.86
EIF3E-216	ENST00000522887	SAMD9	Q5K651	1589 aa		9.67	□□□□□ -0.86
EIF3E-216	ENST00000522887	ADGRL1	O94910	1474 aa		9.67	□□□□□ -0.86
EIF3E-216	ENST00000522887	PHLDB1	Q86UU1	1377 aa		9.67	□□□□□ -0.86
EIF3E-216	ENST00000522887		A0A1W2PRU2	124 aa		9.67	□□□□□ -0.86
EIF3E-216	ENST00000522887	INHA	P05111	366 aa		9.67	□□□□□ -0.86
EIF3E-216	ENST00000522887	SRPK2	P78362	688 aa	Known RBP	9.67	□□□□□ -0.86
EIF3E-216	ENST00000522887	RELB	Q01201	579 aa		9.67	□□□□□ -0.86
EIF3E-216	ENST00000522887	NLRP3	Q96P20	1036 aa		9.67	□□□□□ -0.86
EIF3E-216	ENST00000522887	SLC4A9	Q96Q91	983 aa		9.67	□□□□□ -0.86
EIF3E-216	ENST00000522887	EFCAB5	A4FU69	1503 aa		9.66	□□□□□ -0.86
EIF3E-216	ENST00000522887	SOS2	Q07890	1332 aa	Predicted RBP	9.66	□□□□□ -0.86
EIF3E-216	ENST00000522887	ATG7	O95352	703 aa		9.66	□□□□□ -0.86
EIF3E-216	ENST00000522887	RASA1	P20936	1047 aa		9.66	□□□□□ -0.86
EIF3E-216	ENST00000522887	AGBL1	Q96MI9	1066 aa		9.66	□□□□□ -0.86
EIF3E-216	ENST00000522887	ADAMTS8	Q9UP79	889 aa		9.66	□□□□□ -0.86
EIF3E-216	ENST00000522887	HRH3	Q9Y5N1	445 aa		9.66	□□□□□ -0.86
EIF3E-216	ENST00000522887	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	9.66	□□□□□ -0.86
EIF3E-216	ENST00000522887	SCNN1D	P51172	638 aa		9.65	□□□□□ -0.86
EIF3E-216	ENST00000522887	GDF10	P55107	478 aa		9.65	□□□□□ -0.86
EIF3E-216	ENST00000522887	PSME1	Q06323	249 aa		9.65	□□□□□ -0.86
EIF3E-216	ENST00000522887	WDR44	Q5JSH3	913 aa		9.65	□□□□□ -0.86
EIF3E-216	ENST00000522887	ARHGEF10L	Q9HCE6	1279 aa		9.65	□□□□□ -0.86
EIF3E-216	ENST00000522887	CDK13	Q14004	1512 aa	Known RBP	9.65	□□□□□ -0.86
EIF3E-216	ENST00000522887	CLIP1	P30622	1438 aa		9.65	□□□□□ -0.87
EIF3E-216	ENST00000522887	TTLL8	A6PVC2	850 aa		9.64	□□□□□ -0.87
EIF3E-216	ENST00000522887	USP17L15	C9J2P7	530 aa		9.64	□□□□□ -0.87
EIF3E-216	ENST00000522887	USP17L10	C9JJH3	530 aa		9.64	□□□□□ -0.87
EIF3E-216	ENST00000522887	USP17L13	C9JLJ4	530 aa		9.64	□□□□□ -0.87
EIF3E-216	ENST00000522887	USP17L12	C9JPN9	530 aa		9.64	□□□□□ -0.87
EIF3E-216	ENST00000522887	USP17L11	C9JVI0	530 aa		9.64	□□□□□ -0.87
EIF3E-216	ENST00000522887	USP17L21	D6R901	530 aa		9.64	□□□□□ -0.87
EIF3E-216	ENST00000522887	USP17L18	D6R9N7	530 aa		9.64	□□□□□ -0.87
EIF3E-216	ENST00000522887	USP17L22	D6RA61	530 aa		9.64	□□□□□ -0.87
EIF3E-216	ENST00000522887	USP17L17	D6RBQ6	530 aa		9.64	□□□□□ -0.87
EIF3E-216	ENST00000522887	USP17L19	D6RCP7	530 aa		9.64	□□□□□ -0.87
EIF3E-216	ENST00000522887	USP17L20	D6RJB6	530 aa		9.64	□□□□□ -0.87
EIF3E-216	ENST00000522887	PPFIA3	O75145	1194 aa		9.64	□□□□□ -0.87
EIF3E-216	ENST00000522887	CLDN10	P78369	228 aa		9.64	□□□□□ -0.87
EIF3E-216	ENST00000522887	FOXK2	Q01167	660 aa		9.64	□□□□□ -0.87
EIF3E-216	ENST00000522887	USP17L24	Q0WX57	530 aa		9.64	□□□□□ -0.87
EIF3E-216	ENST00000522887	PTK7	Q13308	1070 aa		9.64	□□□□□ -0.87
EIF3E-216	ENST00000522887	CCDC102B	Q68D86	513 aa		9.64	□□□□□ -0.87
EIF3E-216	ENST00000522887	NBPF15	Q8N660	670 aa		9.64	□□□□□ -0.87
EIF3E-216	ENST00000522887	CNKSR1	Q969H4	720 aa		9.64	□□□□□ -0.87
EIF3E-216	ENST00000522887	ETNK1	Q9HBU6	452 aa		9.64	□□□□□ -0.87
EIF3E-216	ENST00000522887	ARHGAP35	Q9NRY4	1499 aa		9.64	□□□□□ -0.87
EIF3E-216	ENST00000522887	PPRC1	Q5VV67	1664 aa	Known RBP	9.64	□□□□□ -0.87
EIF3E-216	ENST00000522887	CFAP43	Q8NDM7	1665 aa		9.64	□□□□□ -0.87
EIF3E-216	ENST00000522887	AKNA	Q7Z591	1439 aa		9.64	□□□□□ -0.87
EIF3E-216	ENST00000522887	GTF2E1	P29083	439 aa	Predicted RBP	9.63	□□□□□ -0.87
EIF3E-216	ENST00000522887	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	9.63	□□□□□ -0.87
EIF3E-216	ENST00000522887	C6orf118	Q5T5N4	469 aa		9.63	□□□□□ -0.87
EIF3E-216	ENST00000522887	FANCA	O15360	1455 aa		9.62	□□□□□ -0.87
EIF3E-216	ENST00000522887	DENND4B	O75064	1496 aa	Predicted RBP	9.62	□□□□□ -0.87
EIF3E-216	ENST00000522887	LOC105371045	A0A1W2PR82	267 aa		9.62	□□□□□ -0.87

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