RNA–Protein interactions for RNA: ENST00000522855.5

SKP1-210, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 2 BASIC

Gene SKP1, Length 802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-210ENST00000522855 FAM200AQ8TCP9 573 aa7.76□□□□□ -1.17
SKP1-210ENST00000522855 STK32AQ8WU08 396 aa7.76□□□□□ -1.17
SKP1-210ENST00000522855 ZNF594Q96JF6 807 aaPredicted RBP7.76□□□□□ -1.17
SKP1-210ENST00000522855 TMEM88BA6NKF7 163 aa7.75□□□□□ -1.17
SKP1-210ENST00000522855 SCNN1DP51172 638 aa7.75□□□□□ -1.17
SKP1-210ENST00000522855 CLDN10P78369 228 aa7.75□□□□□ -1.17
SKP1-210ENST00000522855 KCNA1Q09470 495 aa7.75□□□□□ -1.17
SKP1-210ENST00000522855 RIPOR1Q6ZS17 1223 aa7.75□□□□□ -1.17
SKP1-210ENST00000522855 SIX5Q8N196 739 aa7.75□□□□□ -1.17
SKP1-210ENST00000522855 TIMMDC1Q9NPL8 285 aa7.75□□□□□ -1.17
SKP1-210ENST00000522855 H7C1W4 665 aa7.74□□□□□ -1.17
SKP1-210ENST00000522855 F11P03951 625 aa7.74□□□□□ -1.17
SKP1-210ENST00000522855 CELA2BP08218 269 aaPredicted RBP7.74□□□□□ -1.17
SKP1-210ENST00000522855 DPYDQ12882 1025 aa7.74□□□□□ -1.17
SKP1-210ENST00000522855 GTPBP3Q969Y2 492 aaKnown RBP7.74□□□□□ -1.17
SKP1-210ENST00000522855 GAS2L1Q99501 681 aaPredicted RBP7.74□□□□□ -1.17
SKP1-210ENST00000522855 PODXL2Q9NZ53 605 aa7.74□□□□□ -1.17
SKP1-210ENST00000522855 IGF1RP08069 1367 aa7.73□□□□□ -1.17
SKP1-210ENST00000522855 SWI5Q1ZZU3 235 aa7.73□□□□□ -1.17
SKP1-210ENST00000522855 C4orf17Q53FE4 359 aa7.73□□□□□ -1.17
SKP1-210ENST00000522855 ZSCAN10Q96SZ4 725 aaPredicted RBP7.73□□□□□ -1.17
SKP1-210ENST00000522855 NUCKS1Q9H1E3 243 aaKnown RBP7.73□□□□□ -1.17
SKP1-210ENST00000522855 A0A1B0GTH6 734 aa7.72□□□□□ -1.17
SKP1-210ENST00000522855 RNF225M0QZC1 329 aaPredicted RBP7.72□□□□□ -1.17
SKP1-210ENST00000522855 SEC13P55735 322 aa7.72□□□□□ -1.17
SKP1-210ENST00000522855 RASSF7Q02833 373 aa7.72□□□□□ -1.17
SKP1-210ENST00000522855 ESCO1Q5FWF5 840 aa7.72□□□□□ -1.17
SKP1-210ENST00000522855 CCDC102BQ68D86 513 aa7.72□□□□□ -1.17
SKP1-210ENST00000522855 ZNF295-AS1Q8N0V1 137 aa7.72□□□□□ -1.17
SKP1-210ENST00000522855 TPCN2Q8NHX9 752 aa7.72□□□□□ -1.17
SKP1-210ENST00000522855 PPARGC1BQ86YN6 1023 aaKnown RBP7.71□□□□□ -1.18
SKP1-210ENST00000522855 KIAA1024Q9UPX6 916 aa7.71□□□□□ -1.18
SKP1-210ENST00000522855 PCDHGA11Q9Y5H2 935 aa7.71□□□□□ -1.18
SKP1-210ENST00000522855 RHBDD1Q8TEB9 315 aa7.7□□□□□ -1.18
SKP1-210ENST00000522855 CLP1Q92989 425 aaKnown RBP7.7□□□□□ -1.18
SKP1-210ENST00000522855 ACDQ96AP0 544 aa7.7□□□□□ -1.18
SKP1-210ENST00000522855 INHAP05111 366 aa7.69□□□□□ -1.18
SKP1-210ENST00000522855 PHKA2P46019 1235 aa7.69□□□□□ -1.18
SKP1-210ENST00000522855 LBRQ14739 615 aaKnown RBP7.69□□□□□ -1.18
SKP1-210ENST00000522855 TLR1Q15399 786 aa7.69□□□□□ -1.18
SKP1-210ENST00000522855 FOXR1Q6PIV2 292 aa7.69□□□□□ -1.18
SKP1-210ENST00000522855 TMEM151AQ8N4L1 468 aa7.69□□□□□ -1.18
SKP1-210ENST00000522855 GPAMQ9HCL2 828 aa7.69□□□□□ -1.18
SKP1-210ENST00000522855 CARNS1A5YM72 827 aa7.68□□□□□ -1.18
SKP1-210ENST00000522855 TMEM229AB2RXF0 380 aa7.68□□□□□ -1.18
SKP1-210ENST00000522855 M0R2N6 131 aa7.68□□□□□ -1.18
SKP1-210ENST00000522855 ZBTB7BO15156 539 aaPredicted RBP7.68□□□□□ -1.18
SKP1-210ENST00000522855 ATP4AP20648 1035 aa7.68□□□□□ -1.18
SKP1-210ENST00000522855 MSX1P28360 303 aa7.68□□□□□ -1.18
SKP1-210ENST00000522855 GDF10P55107 478 aa7.68□□□□□ -1.18
SKP1-210ENST00000522855 GNASQ5JWF2 1037 aa7.68□□□□□ -1.18
SKP1-210ENST00000522855 TRERF1Q96PN7 1200 aa7.68□□□□□ -1.18
SKP1-210ENST00000522855 CFHR5Q9BXR6 569 aa7.68□□□□□ -1.18
SKP1-210ENST00000522855 CRISPLD1Q9H336 500 aa7.68□□□□□ -1.18
SKP1-210ENST00000522855 LRRC4BQ9NT99 713 aa7.68□□□□□ -1.18
SKP1-210ENST00000522855 NDFIP2Q9NV92 336 aa7.68□□□□□ -1.18
SKP1-210ENST00000522855 IQSEC3Q9UPP2 1182 aaPredicted RBP7.68□□□□□ -1.18
SKP1-210ENST00000522855 GDF11O95390 407 aa7.67□□□□□ -1.18
SKP1-210ENST00000522855 BCRP11274 1271 aa7.67□□□□□ -1.18
SKP1-210ENST00000522855 MX2P20592 715 aa7.67□□□□□ -1.18
SKP1-210ENST00000522855 MAP3K10Q02779 954 aa7.67□□□□□ -1.18
SKP1-210ENST00000522855 TMEM214Q6NUQ4 689 aaKnown RBP7.67□□□□□ -1.18
SKP1-210ENST00000522855 BACH1O14867 736 aa7.66□□□□□ -1.18
SKP1-210ENST00000522855 DKK1O94907 266 aa7.66□□□□□ -1.18
SKP1-210ENST00000522855 ATP2B4P23634 1241 aa7.66□□□□□ -1.18
SKP1-210ENST00000522855 IRS1P35568 1242 aa7.66□□□□□ -1.18
SKP1-210ENST00000522855 FAM69CQ0P6D2 419 aa7.66□□□□□ -1.18
SKP1-210ENST00000522855 MTFR1Q15390 333 aa7.66□□□□□ -1.18
SKP1-210ENST00000522855 SLC4A9Q96Q91 983 aa7.66□□□□□ -1.18
SKP1-210ENST00000522855 RUBCNLQ9H714 662 aa7.66□□□□□ -1.18
SKP1-210ENST00000522855 CCDC9Q9Y3X0 531 aaKnown RBP7.66□□□□□ -1.18
SKP1-210ENST00000522855 SFI1A8K8P3 1242 aa7.65□□□□□ -1.18
SKP1-210ENST00000522855 KANK3Q6NY19 840 aa7.65□□□□□ -1.18
SKP1-210ENST00000522855 CCER1Q8TC90 406 aaPredicted RBP7.65□□□□□ -1.18
SKP1-210ENST00000522855 HCN2Q9UL51 889 aa7.65□□□□□ -1.18
SKP1-210ENST00000522855 MTMR7Q9Y216 660 aa7.65□□□□□ -1.18
SKP1-210ENST00000522855 USP3Q9Y6I4 520 aa7.65□□□□□ -1.18
SKP1-210ENST00000522855 DNMT3AQ9Y6K1 912 aaPredicted RBP7.65□□□□□ -1.18
SKP1-210ENST00000522855 SSFA2P28290 1259 aa7.64□□□□□ -1.19
SKP1-210ENST00000522855 PLA2G4AP47712 749 aa7.64□□□□□ -1.19
SKP1-210ENST00000522855 SMTNP53814 917 aa7.64□□□□□ -1.19
SKP1-210ENST00000522855 SCARF2Q96GP6 870 aaPredicted RBP7.64□□□□□ -1.19
SKP1-210ENST00000522855 HINFPQ9BQA5 517 aa7.64□□□□□ -1.19
SKP1-210ENST00000522855 ZNF358Q9NW07 568 aa7.64□□□□□ -1.19
SKP1-210ENST00000522855 GNEQ9Y223 722 aaKnown RBP7.64□□□□□ -1.19
SKP1-210ENST00000522855 OIP5O43482 229 aa7.63□□□□□ -1.19
SKP1-210ENST00000522855 MAP2K3P46734 347 aa7.63□□□□□ -1.19
SKP1-210ENST00000522855 MARSP56192 900 aaKnown RBP7.63□□□□□ -1.19
SKP1-210ENST00000522855 C1orf229Q6ZS94 237 aaPredicted RBP7.63□□□□□ -1.19
SKP1-210ENST00000522855 C1orf216Q8TAB5 229 aa7.63□□□□□ -1.19
SKP1-210ENST00000522855 OXCT2Q9BYC2 517 aaPredicted RBP7.63□□□□□ -1.19
SKP1-210ENST00000522855 ATXN7L1Q9ULK2 861 aaPredicted RBP7.63□□□□□ -1.19
SKP1-210ENST00000522855 IVNS1ABPQ9Y6Y0 642 aa7.63□□□□□ -1.19
SKP1-210ENST00000522855 C2CD2LO14523 706 aa7.62□□□□□ -1.19
SKP1-210ENST00000522855 PRMT3O60678 531 aa7.62□□□□□ -1.19
SKP1-210ENST00000522855 GTF2E1P29083 439 aaPredicted RBP7.62□□□□□ -1.19
SKP1-210ENST00000522855 ARID4AP29374 1257 aaPredicted RBP7.62□□□□□ -1.19
SKP1-210ENST00000522855 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.62□□□□□ -1.193e-6■■■■■ 28.6
SKP1-210ENST00000522855 TSEN2Q8NCE0 465 aaKnown RBP7.62□□□□□ -1.19
SKP1-210ENST00000522855 ENAMQ9NRM1 1142 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms