RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 RFX1P22670 979 aa8.8□□□□□ -1
HMGB1P1-201ENST00000522557 SRPK2P78362 688 aaKnown RBP8.8□□□□□ -1
HMGB1P1-201ENST00000522557 FOXK2Q01167 660 aa8.8□□□□□ -1
HMGB1P1-201ENST00000522557 FOXR1Q6PIV2 292 aa8.8□□□□□ -1
HMGB1P1-201ENST00000522557 LARP1Q6PKG0 1096 aaKnown RBP8.8□□□□□ -1
HMGB1P1-201ENST00000522557 SLC9A9Q8IVB4 645 aa8.8□□□□□ -1
HMGB1P1-201ENST00000522557 TSEN2Q8NCE0 465 aaKnown RBP8.8□□□□□ -1
HMGB1P1-201ENST00000522557 ZDHHC1Q8WTX9 485 aa8.8□□□□□ -1
HMGB1P1-201ENST00000522557 CSB-PGBD3P0DP91 1061 aa8.79□□□□□ -1
HMGB1P1-201ENST00000522557 TRIM26Q12899 539 aaPredicted RBP8.79□□□□□ -1
HMGB1P1-201ENST00000522557 PTK7Q13308 1070 aa8.79□□□□□ -1
HMGB1P1-201ENST00000522557 UBAP2LQ14157 1087 aaKnown RBP8.79□□□□□ -1
HMGB1P1-201ENST00000522557 PGBD3Q8N328 593 aa8.79□□□□□ -1
HMGB1P1-201ENST00000522557 STK17AQ9UEE5 414 aa8.79□□□□□ -1
HMGB1P1-201ENST00000522557 ATP4AP20648 1035 aa8.78□□□□□ -1
HMGB1P1-201ENST00000522557 L3MBTL2Q969R5 705 aa8.78□□□□□ -1
HMGB1P1-201ENST00000522557 TRAIPQ9BWF2 469 aa8.78□□□□□ -1
HMGB1P1-201ENST00000522557 TSPAN10Q9H1Z9 355 aaPredicted RBP8.78□□□□□ -1
HMGB1P1-201ENST00000522557 M0R2N6 131 aa8.77□□□□□ -1.01
HMGB1P1-201ENST00000522557 LGR5O75473 907 aa8.77□□□□□ -1.01
HMGB1P1-201ENST00000522557 NOS2P35228 1153 aa8.77□□□□□ -1.01
HMGB1P1-201ENST00000522557 TXLNAP40222 546 aa8.77□□□□□ -1.01
HMGB1P1-201ENST00000522557 SEC13P55735 322 aa8.77□□□□□ -1.01
HMGB1P1-201ENST00000522557 DPYDQ12882 1025 aa8.77□□□□□ -1.01
HMGB1P1-201ENST00000522557 TEAD4Q15561 434 aa8.77□□□□□ -1.01
HMGB1P1-201ENST00000522557 SH3PXD2AQ5TCZ1 1133 aa8.77□□□□□ -1.01
HMGB1P1-201ENST00000522557 WHAMMQ8TF30 809 aa8.77□□□□□ -1.01
HMGB1P1-201ENST00000522557 TRERF1Q96PN7 1200 aa8.77□□□□□ -1.01
HMGB1P1-201ENST00000522557 RBM19Q9Y4C8 960 aaKnown RBP8.77□□□□□ -1.01
HMGB1P1-201ENST00000522557 ADAMTS2O95450 1211 aa8.76□□□□□ -1.01
HMGB1P1-201ENST00000522557 SLURP2P0DP57 97 aa8.76□□□□□ -1.01
HMGB1P1-201ENST00000522557 ARSJQ5FYB0 599 aaPredicted RBP8.76□□□□□ -1.01
HMGB1P1-201ENST00000522557 EFHC2Q5JST6 749 aa8.76□□□□□ -1.01
HMGB1P1-201ENST00000522557 CRISPLD1Q9H336 500 aa8.76□□□□□ -1.01
HMGB1P1-201ENST00000522557 A0A1W2PNR3 127 aa8.75□□□□□ -1.01
HMGB1P1-201ENST00000522557 FAM196BA6NMK8 535 aa8.75□□□□□ -1.01
HMGB1P1-201ENST00000522557 USP17L15C9J2P7 530 aa8.75□□□□□ -1.01
HMGB1P1-201ENST00000522557 USP17L10C9JJH3 530 aa8.75□□□□□ -1.01
HMGB1P1-201ENST00000522557 USP17L13C9JLJ4 530 aa8.75□□□□□ -1.01
HMGB1P1-201ENST00000522557 USP17L12C9JPN9 530 aa8.75□□□□□ -1.01
HMGB1P1-201ENST00000522557 USP17L11C9JVI0 530 aa8.75□□□□□ -1.01
HMGB1P1-201ENST00000522557 USP17L21D6R901 530 aa8.75□□□□□ -1.01
HMGB1P1-201ENST00000522557 USP17L18D6R9N7 530 aa8.75□□□□□ -1.01
HMGB1P1-201ENST00000522557 USP17L22D6RA61 530 aa8.75□□□□□ -1.01
HMGB1P1-201ENST00000522557 USP17L17D6RBQ6 530 aa8.75□□□□□ -1.01
HMGB1P1-201ENST00000522557 USP17L19D6RCP7 530 aa8.75□□□□□ -1.01
HMGB1P1-201ENST00000522557 USP17L20D6RJB6 530 aa8.75□□□□□ -1.01
HMGB1P1-201ENST00000522557 PPP1R15AO75807 674 aaPredicted RBP8.75□□□□□ -1.01
HMGB1P1-201ENST00000522557 USP17L24Q0WX57 530 aa8.75□□□□□ -1.01
HMGB1P1-201ENST00000522557 LBRQ14739 615 aaKnown RBP8.75□□□□□ -1.01
HMGB1P1-201ENST00000522557 NBPF1Q3BBV0 1214 aa8.75□□□□□ -1.01
HMGB1P1-201ENST00000522557 ANKMY2Q8IV38 441 aa8.75□□□□□ -1.01
HMGB1P1-201ENST00000522557 C1orf216Q8TAB5 229 aa8.75□□□□□ -1.01
HMGB1P1-201ENST00000522557 ZIC5Q96T25 663 aa8.75□□□□□ -1.01
HMGB1P1-201ENST00000522557 ZNF232Q9UNY5 417 aa8.75□□□□□ -1.01
HMGB1P1-201ENST00000522557 SERTM1A2A2V5 107 aa8.74□□□□□ -1.01
HMGB1P1-201ENST00000522557 C21orf2O43822 256 aa8.74□□□□□ -1.01
HMGB1P1-201ENST00000522557 SRSF11Q05519 484 aaKnown RBP8.74□□□□□ -1.01
HMGB1P1-201ENST00000522557 GAS2L2Q8NHY3 880 aa8.74□□□□□ -1.01
HMGB1P1-201ENST00000522557 HINFPQ9BQA5 517 aa8.74□□□□□ -1.01
HMGB1P1-201ENST00000522557 CFHR5Q9BXR6 569 aa8.74□□□□□ -1.01
HMGB1P1-201ENST00000522557 ZCCHC2Q9C0B9 1178 aaKnown RBP8.74□□□□□ -1.01
HMGB1P1-201ENST00000522557 MBIPQ9NS73 344 aa8.74□□□□□ -1.01
HMGB1P1-201ENST00000522557 IGF1RP08069 1367 aa8.73□□□□□ -1.01
HMGB1P1-201ENST00000522557 BNIP3LO60238 219 aa8.73□□□□□ -1.01
HMGB1P1-201ENST00000522557 TATP17735 454 aaPredicted RBP8.73□□□□□ -1.01
HMGB1P1-201ENST00000522557 ZNF385CQ66K41 422 aaPredicted RBP8.73□□□□□ -1.01
HMGB1P1-201ENST00000522557 C7orf43Q8WVR3 580 aa8.73□□□□□ -1.01
HMGB1P1-201ENST00000522557 KLRG1Q96E93 195 aa8.73□□□□□ -1.01
HMGB1P1-201ENST00000522557 ZDHHC3Q9NYG2 299 aa8.73□□□□□ -1.01
HMGB1P1-201ENST00000522557 HCN4Q9Y3Q4 1203 aa8.73□□□□□ -1.01
HMGB1P1-201ENST00000522557 ATAD2Q6PL18 1390 aa8.73□□□□□ -1.01
HMGB1P1-201ENST00000522557 EML1O00423 815 aa8.72□□□□□ -1.01
HMGB1P1-201ENST00000522557 MX2P20592 715 aa8.72□□□□□ -1.01
HMGB1P1-201ENST00000522557 PSMA6P60900 246 aaKnown RBP8.72□□□□□ -1.01
HMGB1P1-201ENST00000522557 LYPD4Q6UWN0 246 aa8.72□□□□□ -1.01
HMGB1P1-201ENST00000522557 BICDL1Q6ZP65 573 aa8.72□□□□□ -1.01
HMGB1P1-201ENST00000522557 RETREG2Q8NC44 543 aa8.72□□□□□ -1.01
HMGB1P1-201ENST00000522557 SCG3Q8WXD2 468 aaKnown RBP8.72□□□□□ -1.01
HMGB1P1-201ENST00000522557 ABHD17AQ96GS6 310 aa8.72□□□□□ -1.01
HMGB1P1-201ENST00000522557 NDFIP2Q9NV92 336 aa8.72□□□□□ -1.01
HMGB1P1-201ENST00000522557 PPP1R12BO60237 982 aaPredicted RBP8.71□□□□□ -1.02
HMGB1P1-201ENST00000522557 NLRP8Q86W28 1048 aa8.71□□□□□ -1.02
HMGB1P1-201ENST00000522557 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.7□□□□□ -1.02
HMGB1P1-201ENST00000522557 FAM181BA6NEQ2 426 aa8.7□□□□□ -1.02
HMGB1P1-201ENST00000522557 CTBSQ01459 385 aa8.7□□□□□ -1.02
HMGB1P1-201ENST00000522557 SVOPQ8N4V2 548 aa8.7□□□□□ -1.02
HMGB1P1-201ENST00000522557 CHMP7Q8WUX9 453 aaPredicted RBP8.7□□□□□ -1.02
HMGB1P1-201ENST00000522557 PODXL2Q9NZ53 605 aa8.7□□□□□ -1.02
HMGB1P1-201ENST00000522557 HCN2Q9UL51 889 aa8.7□□□□□ -1.02
HMGB1P1-201ENST00000522557 PHF24Q9UPV7 400 aa8.7□□□□□ -1.02
HMGB1P1-201ENST00000522557 PCDHGC4Q9Y5F7 938 aa8.7□□□□□ -1.02
HMGB1P1-201ENST00000522557 C2CD2LO14523 706 aa8.69□□□□□ -1.02
HMGB1P1-201ENST00000522557 ATXN7O15265 892 aaPredicted RBP8.69□□□□□ -1.02
HMGB1P1-201ENST00000522557 CELA2BP08218 269 aaPredicted RBP8.69□□□□□ -1.02
HMGB1P1-201ENST00000522557 PDIA4P13667 645 aaKnown RBP8.69□□□□□ -1.02
HMGB1P1-201ENST00000522557 ACDQ96AP0 544 aa8.69□□□□□ -1.02
HMGB1P1-201ENST00000522557 ATXN7L1Q9ULK2 861 aaPredicted RBP8.69□□□□□ -1.02
HMGB1P1-201ENST00000522557 GJA3Q9Y6H8 435 aa8.69□□□□□ -1.02
HMGB1P1-201ENST00000522557 ARHGEF15O94989 841 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms