RNA–Protein interactions for RNA: ENST00000521932.1

VPS13B-210, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 1,055 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-210ENST00000521932 UNC5CLQ8IV45 518 aa11.29□□□□□ -0.6
VPS13B-210ENST00000521932 PRKRIP1Q9H875 184 aaPredicted RBP11.29□□□□□ -0.6
VPS13B-210ENST00000521932 RBM27Q9P2N5 1060 aaKnown RBP11.29□□□□□ -0.6
VPS13B-210ENST00000521932 EMILIN1Q9Y6C2 1016 aa11.29□□□□□ -0.6
VPS13B-210ENST00000521932 CAMTA1Q9Y6Y1 1673 aa11.29□□□□□ -0.6
VPS13B-210ENST00000521932 AFF2P51816 1311 aa11.29□□□□□ -0.6
VPS13B-210ENST00000521932 RTL1A6NKG5 1358 aa11.28□□□□□ -0.6
VPS13B-210ENST00000521932 BLMP54132 1417 aaPredicted RBP11.28□□□□□ -0.6
VPS13B-210ENST00000521932 SMG6Q86US8 1419 aaKnown RBP11.28□□□□□ -0.6
VPS13B-210ENST00000521932 LMO7Q8WWI1 1683 aa11.28□□□□□ -0.6
VPS13B-210ENST00000521932 TESPA1A2RU30 521 aaPredicted RBP11.28□□□□□ -0.6
VPS13B-210ENST00000521932 PTGDRQ13258 359 aa11.28□□□□□ -0.6
VPS13B-210ENST00000521932 CNGB1Q14028 1251 aaPredicted RBP11.28□□□□□ -0.6
VPS13B-210ENST00000521932 ZNF772Q68DY9 489 aaPredicted RBP11.28□□□□□ -0.6
VPS13B-210ENST00000521932 TATDN2Q93075 761 aa11.28□□□□□ -0.6
VPS13B-210ENST00000521932 RGS17Q9UGC6 210 aaPredicted RBP11.28□□□□□ -0.6
VPS13B-210ENST00000521932 USP21Q9UK80 565 aa11.28□□□□□ -0.6
VPS13B-210ENST00000521932 FLT4P35916 1363 aa11.28□□□□□ -0.6
VPS13B-210ENST00000521932 PPP2R1AP30153 589 aa11.27□□□□□ -0.61
VPS13B-210ENST00000521932 MTHFSP49914 203 aa11.27□□□□□ -0.61
VPS13B-210ENST00000521932 HSP90AB2PQ58FF8 381 aa11.27□□□□□ -0.61
VPS13B-210ENST00000521932 MAP2P11137 1827 aaKnown RBP11.27□□□□□ -0.61
VPS13B-210ENST00000521932 INSRP06213 1382 aa11.27□□□□□ -0.61
VPS13B-210ENST00000521932 NWD2Q9ULI1 1742 aa11.26□□□□□ -0.61
VPS13B-210ENST00000521932 LTN1O94822 1766 aa11.26□□□□□ -0.61
VPS13B-210ENST00000521932 ZBTB7CA1YPR0 619 aa11.26□□□□□ -0.61
VPS13B-210ENST00000521932 PPM1GO15355 546 aaPredicted RBP11.26□□□□□ -0.61
VPS13B-210ENST00000521932 EVA1CP58658 441 aa11.26□□□□□ -0.61
VPS13B-210ENST00000521932 NUDT18Q6ZVK8 323 aa11.26□□□□□ -0.61
VPS13B-210ENST00000521932 WBP1LQ9NX94 342 aa11.26□□□□□ -0.61
VPS13B-210ENST00000521932 PNMA3Q9UL41 463 aa11.26□□□□□ -0.61
VPS13B-210ENST00000521932 COL5A2P05997 1499 aaPredicted RBP11.25□□□□□ -0.61
VPS13B-210ENST00000521932 PLCH1Q4KWH8 1693 aa11.25□□□□□ -0.61
VPS13B-210ENST00000521932 VPS72Q15906 364 aa11.25□□□□□ -0.61
VPS13B-210ENST00000521932 QTRT2Q9H974 415 aaKnown RBP11.25□□□□□ -0.61
VPS13B-210ENST00000521932 TRPC5Q9UL62 973 aaPredicted RBP11.25□□□□□ -0.61
VPS13B-210ENST00000521932 PEAK1Q9H792 1746 aa11.25□□□□□ -0.61
VPS13B-210ENST00000521932 WDR17Q8IZU2 1322 aa11.25□□□□□ -0.61
VPS13B-210ENST00000521932 NBPF26B4DH59 902 aa11.24□□□□□ -0.61
VPS13B-210ENST00000521932 ANP32CO43423 234 aa11.24□□□□□ -0.61
VPS13B-210ENST00000521932 LARP1Q6PKG0 1096 aaKnown RBP11.24□□□□□ -0.61
VPS13B-210ENST00000521932 ANKRD24Q8TF21 1146 aa11.24□□□□□ -0.61
VPS13B-210ENST00000521932 STRN4Q9NRL3 753 aa11.24□□□□□ -0.61
VPS13B-210ENST00000521932 CDK12Q9NYV4 1490 aaPredicted RBP11.24□□□□□ -0.61
VPS13B-210ENST00000521932 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.23□□□□□ -0.61
VPS13B-210ENST00000521932 SAMD7Q7Z3H4 446 aa11.23□□□□□ -0.61
VPS13B-210ENST00000521932 GJD4Q96KN9 370 aaPredicted RBP11.23□□□□□ -0.61
VPS13B-210ENST00000521932 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.23□□□□□ -0.61
VPS13B-210ENST00000521932 SPATA31A5Q5VU36 1347 aa11.23□□□□□ -0.61
VPS13B-210ENST00000521932 SPATA31A7Q8IWB4 1347 aa11.23□□□□□ -0.61
VPS13B-210ENST00000521932 MYBBP1AQ9BQG0 1328 aaKnown RBP11.23□□□□□ -0.61
VPS13B-210ENST00000521932 ATRNO75882 1429 aa11.23□□□□□ -0.61
VPS13B-210ENST00000521932 NRAPQ86VF7 1730 aa11.23□□□□□ -0.61
VPS13B-210ENST00000521932 CRB1P82279 1406 aa11.22□□□□□ -0.61
VPS13B-210ENST00000521932 EIF4A2Q14240 407 aaKnown RBP11.22□□□□□ -0.61
VPS13B-210ENST00000521932 RBM26Q5T8P6 1007 aaKnown RBP11.22□□□□□ -0.61
VPS13B-210ENST00000521932 SPATA31A1Q5TZJ5 1347 aa11.22□□□□□ -0.61
VPS13B-210ENST00000521932 POTEAQ6S8J7 498 aa11.22□□□□□ -0.61
VPS13B-210ENST00000521932 LRCH3Q96II8 777 aa11.22□□□□□ -0.61
VPS13B-210ENST00000521932 RGPD5Q99666 1765 aa11.22□□□□□ -0.61
VPS13B-210ENST00000521932 CARD10Q9BWT7 1032 aa11.22□□□□□ -0.61
VPS13B-210ENST00000521932 THRAP3Q9Y2W1 955 aaKnown RBP11.22□□□□□ -0.61
VPS13B-210ENST00000521932 CSB-PGBD3P0DP91 1061 aa11.21□□□□□ -0.61
VPS13B-210ENST00000521932 IL13P35225 146 aa11.21□□□□□ -0.61
VPS13B-210ENST00000521932 NBPF6Q5VWK0 638 aa11.21□□□□□ -0.61
VPS13B-210ENST00000521932 DIEXFQ68CQ4 756 aaKnown RBP11.21□□□□□ -0.61
VPS13B-210ENST00000521932 TOM1L2Q6ZVM7 507 aa11.21□□□□□ -0.61
VPS13B-210ENST00000521932 LTV1Q96GA3 475 aaPredicted RBP11.21□□□□□ -0.61
VPS13B-210ENST00000521932 NBPF4Q96M43 638 aa11.21□□□□□ -0.61
VPS13B-210ENST00000521932 HPS5Q9UPZ3 1129 aa11.21□□□□□ -0.61
VPS13B-210ENST00000521932 DIAPH1O60610 1272 aaKnown RBP11.2□□□□□ -0.62
VPS13B-210ENST00000521932 RXRBP28702 533 aa11.2□□□□□ -0.62
VPS13B-210ENST00000521932 RBM6P78332 1123 aaKnown RBP11.2□□□□□ -0.62
VPS13B-210ENST00000521932 BARGINQ6ZT62 677 aa11.2□□□□□ -0.62
VPS13B-210ENST00000521932 TCP11L2Q8N4U5 519 aa11.2□□□□□ -0.62
VPS13B-210ENST00000521932 CFAP53Q96M91 514 aa11.2□□□□□ -0.62
VPS13B-210ENST00000521932 EYA1Q99502 592 aa11.2□□□□□ -0.62
VPS13B-210ENST00000521932 NLRP2Q9NX02 1062 aa11.2□□□□□ -0.62
VPS13B-210ENST00000521932 COL3A1P02461 1466 aaPredicted RBP11.19□□□□□ -0.62
VPS13B-210ENST00000521932 TSR3Q9UJK0 312 aaKnown RBP11.19□□□□□ -0.62
VPS13B-210ENST00000521932 CCDC9Q9Y3X0 531 aaKnown RBP11.19□□□□□ -0.62
VPS13B-210ENST00000521932 NCAPD2Q15021 1401 aa11.18□□□□□ -0.62
VPS13B-210ENST00000521932 IGSF1Q8N6C5 1336 aa11.18□□□□□ -0.62
VPS13B-210ENST00000521932 FAM161AQ3B820 660 aa11.18□□□□□ -0.62
VPS13B-210ENST00000521932 USP35Q9P2H5 1018 aa11.18□□□□□ -0.62
VPS13B-210ENST00000521932 GPR37O15354 613 aa11.17□□□□□ -0.62
VPS13B-210ENST00000521932 CDCA7Q9BWT1 371 aaPredicted RBP11.17□□□□□ -0.62
VPS13B-210ENST00000521932 NUDCQ9Y266 331 aa11.17□□□□□ -0.62
VPS13B-210ENST00000521932 FAM208AQ9UK61 1670 aaKnown RBP11.17□□□□□ -0.62
VPS13B-210ENST00000521932 GLI3P10071 1580 aa11.16□□□□□ -0.62
VPS13B-210ENST00000521932 ADGRG1Q9Y653 693 aa11.16□□□□□ -0.62
VPS13B-210ENST00000521932 KDRP35968 1356 aa11.16□□□□□ -0.62
VPS13B-210ENST00000521932 IL2RBP14784 551 aa11.15□□□□□ -0.62
VPS13B-210ENST00000521932 USHBP1Q8N6Y0 703 aa11.15□□□□□ -0.62
VPS13B-210ENST00000521932 DISP2A7MBM2 1401 aa11.15□□□□□ -0.62
VPS13B-210ENST00000521932 RGPD1P0DJD0 1748 aa11.15□□□□□ -0.63
VPS13B-210ENST00000521932 PLEKHG2Q9H7P9 1386 aa11.15□□□□□ -0.63
VPS13B-210ENST00000521932 FCHSD2O94868 740 aa11.14□□□□□ -0.63
VPS13B-210ENST00000521932 ITGBL1O95965 494 aaPredicted RBP11.14□□□□□ -0.63
VPS13B-210ENST00000521932 CCDC184Q52MB2 194 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms