RNA–Protein interactions for RNA: ENST00000520497.1

VAPB-206, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 937 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-206ENST00000520497 MYH14Q7Z406 1995 aaKnown RBP10.94□□□□□ -0.66
VAPB-206ENST00000520497 KIF16BQ96L93 1317 aa10.94□□□□□ -0.66
VAPB-206ENST00000520497 TRIM37O94972 964 aa10.94□□□□□ -0.66
VAPB-206ENST00000520497 SLC39A6Q13433 755 aa10.94□□□□□ -0.66
VAPB-206ENST00000520497 EZH2Q15910 746 aaKnown RBP10.94□□□□□ -0.66
VAPB-206ENST00000520497 MRPL50Q8N5N7 158 aaKnown RBP10.94□□□□□ -0.66
VAPB-206ENST00000520497 RREB1Q92766 1687 aa10.94□□□□□ -0.66
VAPB-206ENST00000520497 GIGYF1O75420 1035 aaPredicted RBP10.93□□□□□ -0.66
VAPB-206ENST00000520497 IRX6P78412 446 aaPredicted RBP10.93□□□□□ -0.66
VAPB-206ENST00000520497 PIGBQ92521 554 aa10.93□□□□□ -0.66
VAPB-206ENST00000520497 TMOD3Q9NYL9 352 aa10.93□□□□□ -0.66
VAPB-206ENST00000520497 ARFGEF2Q9Y6D5 1785 aa10.93□□□□□ -0.66
VAPB-206ENST00000520497 NUP188Q5SRE5 1749 aa10.92□□□□□ -0.66
VAPB-206ENST00000520497 BAG6P46379 1132 aa10.92□□□□□ -0.66
VAPB-206ENST00000520497 R3HDM1Q15032 1099 aaKnown RBP10.92□□□□□ -0.66
VAPB-206ENST00000520497 TTC5Q8N0Z6 440 aa10.92□□□□□ -0.66
VAPB-206ENST00000520497 ZNF496Q96IT1 587 aaPredicted RBP10.92□□□□□ -0.66
VAPB-206ENST00000520497 ZNF219Q9P2Y4 722 aaPredicted RBP10.92□□□□□ -0.66
VAPB-206ENST00000520497 AFDNP55196 1824 aaKnown RBP10.92□□□□□ -0.66
VAPB-206ENST00000520497 PDE3AQ14432 1141 aa10.91□□□□□ -0.66
VAPB-206ENST00000520497 C20orf194Q5TEA3 1177 aa10.91□□□□□ -0.66
VAPB-206ENST00000520497 CCDC30Q5VVM6 783 aa10.91□□□□□ -0.66
VAPB-206ENST00000520497 ZKSCAN2Q63HK3 967 aa10.91□□□□□ -0.66
VAPB-206ENST00000520497 PTF1AQ7RTS3 328 aa10.91□□□□□ -0.66
VAPB-206ENST00000520497 ARHGAP45Q92619 1136 aa10.91□□□□□ -0.66
VAPB-206ENST00000520497 FMNL2Q96PY5 1086 aa10.91□□□□□ -0.66
VAPB-206ENST00000520497 CHMP4AQ9BY43 222 aa10.91□□□□□ -0.66
VAPB-206ENST00000520497 PRAMEF22A3QJZ6 481 aa10.9□□□□□ -0.66
VAPB-206ENST00000520497 TCERG1O14776 1098 aaKnown RBP10.9□□□□□ -0.66
VAPB-206ENST00000520497 TRIM27P14373 513 aa10.9□□□□□ -0.66
VAPB-206ENST00000520497 PRIM1P49642 420 aaKnown RBP10.9□□□□□ -0.66
VAPB-206ENST00000520497 HDGFL1Q5TGJ6 251 aa10.9□□□□□ -0.66
VAPB-206ENST00000520497 ATF7IPQ6VMQ6 1270 aa10.9□□□□□ -0.66
VAPB-206ENST00000520497 FRAT1Q92837 279 aaPredicted RBP10.9□□□□□ -0.66
VAPB-206ENST00000520497 CAMKK2Q96RR4 588 aa10.9□□□□□ -0.66
VAPB-206ENST00000520497 ATG3Q9NT62 314 aa10.9□□□□□ -0.66
VAPB-206ENST00000520497 NOB1Q9ULX3 412 aaKnown RBP10.9□□□□□ -0.66
VAPB-206ENST00000520497 ANKRD36CQ5JPF3 1778 aa10.9□□□□□ -0.67
VAPB-206ENST00000520497 NUP98P52948 1817 aa10.89□□□□□ -0.67
VAPB-206ENST00000520497 IPO8O15397 1037 aaKnown RBP10.89□□□□□ -0.67
VAPB-206ENST00000520497 APBA3O96018 575 aa10.89□□□□□ -0.67
VAPB-206ENST00000520497 MYCNP04198 464 aaPredicted RBP10.89□□□□□ -0.67
VAPB-206ENST00000520497 SNRPA1P09661 255 aaKnown RBP10.89□□□□□ -0.67
VAPB-206ENST00000520497 STK31Q9BXU1 1019 aa10.89□□□□□ -0.67
VAPB-206ENST00000520497 PPP4R2Q9NY27 417 aa10.89□□□□□ -0.67
VAPB-206ENST00000520497 ASAP1Q9ULH1 1129 aa10.89□□□□□ -0.67
VAPB-206ENST00000520497 TNNQ9UQP3 1299 aa10.89□□□□□ -0.67
VAPB-206ENST00000520497 RGPD3A6NKT7 1758 aaPredicted RBP10.89□□□□□ -0.67
VAPB-206ENST00000520497 RGPD4Q7Z3J3 1758 aa10.89□□□□□ -0.67
VAPB-206ENST00000520497 ABCC4O15439 1325 aa10.88□□□□□ -0.67
VAPB-206ENST00000520497 PTPRCP08575 1304 aa10.88□□□□□ -0.67
VAPB-206ENST00000520497 PXDNLA1KZ92 1463 aa10.88□□□□□ -0.67
VAPB-206ENST00000520497 RLBP1P12271 317 aa10.88□□□□□ -0.67
VAPB-206ENST00000520497 CANXP27824 592 aaKnown RBP10.88□□□□□ -0.67
VAPB-206ENST00000520497 VSIG10Q8N0Z9 540 aa10.88□□□□□ -0.67
VAPB-206ENST00000520497 ACSBG1Q96GR2 724 aa10.88□□□□□ -0.67
VAPB-206ENST00000520497 MS4A1P11836 297 aa10.87□□□□□ -0.67
VAPB-206ENST00000520497 EIF2S2P20042 333 aaKnown RBP10.87□□□□□ -0.67
VAPB-206ENST00000520497 PDIA6Q15084 440 aa10.87□□□□□ -0.67
VAPB-206ENST00000520497 FAM196AQ6ZSG2 479 aa10.87□□□□□ -0.67
VAPB-206ENST00000520497 G2E3Q7L622 706 aa10.87□□□□□ -0.67
VAPB-206ENST00000520497 DZIP1LQ8IYY4 767 aaKnown RBP10.87□□□□□ -0.67
VAPB-206ENST00000520497 EXOC6Q8TAG9 804 aa10.87□□□□□ -0.67
VAPB-206ENST00000520497 PANK1Q8TE04 598 aa10.87□□□□□ -0.67
VAPB-206ENST00000520497 NECTIN2Q92692 538 aa10.87□□□□□ -0.67
VAPB-206ENST00000520497 SYTL4Q96C24 671 aaPredicted RBP10.87□□□□□ -0.67
VAPB-206ENST00000520497 CRBNQ96SW2 442 aa10.87□□□□□ -0.67
VAPB-206ENST00000520497 CHPF2Q9P2E5 772 aa10.87□□□□□ -0.67
VAPB-206ENST00000520497 USP16Q9Y5T5 823 aa10.87□□□□□ -0.67
VAPB-206ENST00000520497 LRP5O75197 1615 aa10.87□□□□□ -0.67
VAPB-206ENST00000520497 ERBB4Q15303 1308 aa10.86□□□□□ -0.67
VAPB-206ENST00000520497 BCORQ6W2J9 1755 aa10.86□□□□□ -0.67
VAPB-206ENST00000520497 KCNQ2O43526 872 aa10.86□□□□□ -0.67
VAPB-206ENST00000520497 PTCD1O75127 700 aaKnown RBP10.86□□□□□ -0.67
VAPB-206ENST00000520497 FLIIQ13045 1269 aa10.86□□□□□ -0.67
VAPB-206ENST00000520497 LRP10Q7Z4F1 713 aa10.86□□□□□ -0.67
VAPB-206ENST00000520497 API5Q9BZZ5 524 aaKnown RBP10.86□□□□□ -0.67
VAPB-206ENST00000520497 DDX21Q9NR30 783 aaKnown RBP eCLIP10.86□□□□□ -0.67
VAPB-206ENST00000520497 DBF4Q9UBU7 674 aaPredicted RBP10.86□□□□□ -0.67
VAPB-206ENST00000520497 MVPQ14764 893 aaKnown RBP10.85□□□□□ -0.67
VAPB-206ENST00000520497 PROSER3Q2NL68 480 aa10.85□□□□□ -0.67
VAPB-206ENST00000520497 FTSJ3Q8IY81 847 aaKnown RBP10.85□□□□□ -0.67
VAPB-206ENST00000520497 CLUAP1Q96AJ1 413 aa10.85□□□□□ -0.67
VAPB-206ENST00000520497 SLC4A9Q96Q91 983 aa10.85□□□□□ -0.67
VAPB-206ENST00000520497 PHAXQ9H814 394 aaKnown RBP10.85□□□□□ -0.67
VAPB-206ENST00000520497 PALLDQ8WX93 1383 aa10.85□□□□□ -0.67
VAPB-206ENST00000520497 UBR3Q6ZT12 1888 aa10.85□□□□□ -0.67
VAPB-206ENST00000520497 SMARCC1Q92922 1105 aaPredicted RBP10.84□□□□□ -0.67
VAPB-206ENST00000520497 TEX13AQ9BXU3 409 aaPredicted RBP10.84□□□□□ -0.67
VAPB-206ENST00000520497 HYPKQ9NX55 129 aa10.84□□□□□ -0.67
VAPB-206ENST00000520497 COG6Q9Y2V7 657 aa10.84□□□□□ -0.67
VAPB-206ENST00000520497 C4AP0C0L4 1744 aa10.84□□□□□ -0.67
VAPB-206ENST00000520497 C4BP0C0L5 1744 aa10.84□□□□□ -0.67
VAPB-206ENST00000520497 ANXA1P04083 346 aa10.83□□□□□ -0.68
VAPB-206ENST00000520497 DNAJC10Q8IXB1 793 aa10.83□□□□□ -0.68
VAPB-206ENST00000520497 TMEM57Q8N5G2 664 aa10.83□□□□□ -0.68
VAPB-206ENST00000520497 RBM42Q9BTD8 480 aaKnown RBP10.83□□□□□ -0.68
VAPB-206ENST00000520497 TUBGCP6Q96RT7 1819 aa10.83□□□□□ -0.68
VAPB-206ENST00000520497 MYH3P11055 1940 aa10.82□□□□□ -0.68
VAPB-206ENST00000520497 ADCY9O60503 1353 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms