RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 GRIP2Q9C0E4 1043 aa8.18□□□□□ -1.1
SQLE-204ENST00000520493 TIMMDC1Q9NPL8 285 aa8.18□□□□□ -1.1
SQLE-204ENST00000520493 GGA1Q9UJY5 639 aa8.18□□□□□ -1.1
SQLE-204ENST00000520493 SPATA31C2B4DYI2 1134 aa8.17□□□□□ -1.1
SQLE-204ENST00000520493 WASLO00401 505 aaPredicted RBP8.17□□□□□ -1.1
SQLE-204ENST00000520493 IL2RAP01589 272 aa8.17□□□□□ -1.1
SQLE-204ENST00000520493 BMP4P12644 408 aa8.17□□□□□ -1.1
SQLE-204ENST00000520493 WDR44Q5JSH3 913 aa8.17□□□□□ -1.1
SQLE-204ENST00000520493 GNASQ5JWF2 1037 aa8.17□□□□□ -1.1
SQLE-204ENST00000520493 XAGE2Q96GT9 111 aa8.17□□□□□ -1.1
SQLE-204ENST00000520493 ZSCAN10Q96SZ4 725 aaPredicted RBP8.17□□□□□ -1.1
SQLE-204ENST00000520493 CENPCQ03188 943 aa8.16□□□□□ -1.1
SQLE-204ENST00000520493 NKAPLQ5M9Q1 402 aa8.16□□□□□ -1.1
SQLE-204ENST00000520493 TMEM214Q6NUQ4 689 aaKnown RBP8.16□□□□□ -1.1
SQLE-204ENST00000520493 PROSER2Q86WR7 435 aaPredicted RBP8.16□□□□□ -1.1
SQLE-204ENST00000520493 KRTAP4-7Q9BYR0 210 aa8.16□□□□□ -1.1
SQLE-204ENST00000520493 GPAMQ9HCL2 828 aa8.16□□□□□ -1.1
SQLE-204ENST00000520493 NOD1Q9Y239 953 aa8.16□□□□□ -1.1
SQLE-204ENST00000520493 PIK3CDO00329 1044 aa8.15□□□□□ -1.1
SQLE-204ENST00000520493 COBLO75128 1261 aa8.15□□□□□ -1.1
SQLE-204ENST00000520493 THBS1P07996 1170 aa8.15□□□□□ -1.1
SQLE-204ENST00000520493 DGKGP49619 791 aa8.15□□□□□ -1.1
SQLE-204ENST00000520493 SLCO4C1Q6ZQN7 724 aa8.15□□□□□ -1.1
SQLE-204ENST00000520493 POM121CA8CG34 1229 aa8.14□□□□□ -1.11
SQLE-204ENST00000520493 GDF10P55107 478 aa8.14□□□□□ -1.11
SQLE-204ENST00000520493 TLR1Q15399 786 aa8.14□□□□□ -1.11
SQLE-204ENST00000520493 HDGFL1Q5TGJ6 251 aa8.14□□□□□ -1.11
SQLE-204ENST00000520493 CLUAP1Q96AJ1 413 aa8.14□□□□□ -1.11
SQLE-204ENST00000520493 ETNK1Q9HBU6 452 aa8.14□□□□□ -1.11
SQLE-204ENST00000520493 TPSG1Q9NRR2 321 aa8.14□□□□□ -1.11
SQLE-204ENST00000520493 C2CD2LO14523 706 aa8.13□□□□□ -1.11
SQLE-204ENST00000520493 DYRK3O43781 588 aa8.13□□□□□ -1.11
SQLE-204ENST00000520493 PSME1Q06323 249 aa8.13□□□□□ -1.11
SQLE-204ENST00000520493 PRSS36Q5K4E3 855 aa8.13□□□□□ -1.11
SQLE-204ENST00000520493 TIMELESSQ9UNS1 1208 aa8.13□□□□□ -1.11
SQLE-204ENST00000520493 USP17L5A8MUK1 530 aa8.12□□□□□ -1.11
SQLE-204ENST00000520493 INHAP05111 366 aa8.12□□□□□ -1.11
SQLE-204ENST00000520493 EPXP11678 715 aa8.12□□□□□ -1.11
SQLE-204ENST00000520493 NCOA4Q13772 614 aa8.12□□□□□ -1.11
SQLE-204ENST00000520493 HRH3Q9Y5N1 445 aa8.12□□□□□ -1.11
SQLE-204ENST00000520493 A0A1B0GTH6 734 aa8.11□□□□□ -1.11
SQLE-204ENST00000520493 GTF2IP78347 998 aa8.11□□□□□ -1.11
SQLE-204ENST00000520493 TRIM50Q86XT4 487 aa8.11□□□□□ -1.11
SQLE-204ENST00000520493 RHBDD1Q8TEB9 315 aa8.11□□□□□ -1.11
SQLE-204ENST00000520493 FHDC1Q9C0D6 1143 aaPredicted RBP8.11□□□□□ -1.11
SQLE-204ENST00000520493 A6NJR5 290 aa8.1□□□□□ -1.11
SQLE-204ENST00000520493 PHKA2P46019 1235 aa8.1□□□□□ -1.11
SQLE-204ENST00000520493 SCNN1DP51172 638 aa8.1□□□□□ -1.11
SQLE-204ENST00000520493 LCE1DQ5T752 114 aa8.1□□□□□ -1.11
SQLE-204ENST00000520493 PPARGC1BQ86YN6 1023 aaKnown RBP8.1□□□□□ -1.11
SQLE-204ENST00000520493 NEURL1BA8MQ27 555 aa8.09□□□□□ -1.11
SQLE-204ENST00000520493 BACH1O14867 736 aa8.09□□□□□ -1.11
SQLE-204ENST00000520493 ATP9BO43861 1147 aa8.09□□□□□ -1.11
SQLE-204ENST00000520493 STAU1O95793 577 aaKnown RBP8.09□□□□□ -1.11
SQLE-204ENST00000520493 CSB-PGBD3P0DP91 1061 aa8.09□□□□□ -1.11
SQLE-204ENST00000520493 ATP1A2P50993 1020 aa8.09□□□□□ -1.11
SQLE-204ENST00000520493 SMTNP53814 917 aa8.09□□□□□ -1.11
SQLE-204ENST00000520493 CTBSQ01459 385 aa8.09□□□□□ -1.11
SQLE-204ENST00000520493 DEPDC4Q8N2C3 294 aa8.09□□□□□ -1.11
SQLE-204ENST00000520493 PGBD3Q8N328 593 aa8.09□□□□□ -1.11
SQLE-204ENST00000520493 ADAMTS19Q8TE59 1207 aa8.09□□□□□ -1.11
SQLE-204ENST00000520493 GLMNQ92990 594 aa8.09□□□□□ -1.11
SQLE-204ENST00000520493 PLVAPQ9BX97 442 aa8.09□□□□□ -1.11
SQLE-204ENST00000520493 USP17L3A6NCW0 530 aa8.08□□□□□ -1.12
SQLE-204ENST00000520493 USP17L4A6NCW7 530 aa8.08□□□□□ -1.12
SQLE-204ENST00000520493 SPATA31C1P0DKV0 1188 aa8.08□□□□□ -1.12
SQLE-204ENST00000520493 LRP8Q14114 963 aa8.08□□□□□ -1.12
SQLE-204ENST00000520493 C4orf17Q53FE4 359 aa8.08□□□□□ -1.12
SQLE-204ENST00000520493 USP17L2Q6R6M4 530 aa8.08□□□□□ -1.12
SQLE-204ENST00000520493 CHSY3Q70JA7 882 aa8.08□□□□□ -1.12
SQLE-204ENST00000520493 USP17L1Q7RTZ2 530 aa8.08□□□□□ -1.12
SQLE-204ENST00000520493 PLEKHM2Q8IWE5 1019 aa8.08□□□□□ -1.12
SQLE-204ENST00000520493 FNBP4Q8N3X1 1017 aaPredicted RBP8.08□□□□□ -1.12
SQLE-204ENST00000520493 ABHD17AQ96GS6 310 aa8.08□□□□□ -1.12
SQLE-204ENST00000520493 SERTAD1Q9UHV2 236 aa8.08□□□□□ -1.12
SQLE-204ENST00000520493 HYAL3O43820 417 aaPredicted RBP8.07□□□□□ -1.12
SQLE-204ENST00000520493 FGFR3P22607 806 aa8.07□□□□□ -1.12
SQLE-204ENST00000520493 TBC1D9Q6ZT07 1266 aa8.07□□□□□ -1.12
SQLE-204ENST00000520493 TRIM11Q96F44 468 aa8.07□□□□□ -1.12
SQLE-204ENST00000520493 CALR3Q96L12 384 aaKnown RBP8.07□□□□□ -1.12
SQLE-204ENST00000520493 NIFKQ9BYG3 293 aaKnown RBP8.07□□□□□ -1.12
SQLE-204ENST00000520493 ATXN7L1Q9ULK2 861 aaPredicted RBP8.07□□□□□ -1.12
SQLE-204ENST00000520493 PCDHGA11Q9Y5H2 935 aa8.07□□□□□ -1.12
SQLE-204ENST00000520493 TMEM229AB2RXF0 380 aa8.06□□□□□ -1.12
SQLE-204ENST00000520493 PLA2G4AP47712 749 aa8.06□□□□□ -1.12
SQLE-204ENST00000520493 LBRQ14739 615 aaKnown RBP8.06□□□□□ -1.12
SQLE-204ENST00000520493 UCN2Q96RP3 112 aa8.06□□□□□ -1.12
SQLE-204ENST00000520493 RBM19Q9Y4C8 960 aaKnown RBP8.06□□□□□ -1.12
SQLE-204ENST00000520493 A6NJY4 79 aa8.05□□□□□ -1.12
SQLE-204ENST00000520493 UBAP2LQ14157 1087 aaKnown RBP8.05□□□□□ -1.12
SQLE-204ENST00000520493 NBPF1Q3BBV0 1214 aa8.05□□□□□ -1.12
SQLE-204ENST00000520493 EFHC2Q5JST6 749 aa8.05□□□□□ -1.12
SQLE-204ENST00000520493 SLC4A9Q96Q91 983 aa8.05□□□□□ -1.12
SQLE-204ENST00000520493 RUBCNLQ9H714 662 aa8.05□□□□□ -1.12
SQLE-204ENST00000520493 CDK2AP1O14519 115 aa8.04□□□□□ -1.12
SQLE-204ENST00000520493 MSX1P28360 303 aa8.04□□□□□ -1.12
SQLE-204ENST00000520493 C1orf216Q8TAB5 229 aa8.04□□□□□ -1.12
SQLE-204ENST00000520493 ARAFP10398 606 aa8.03□□□□□ -1.12
SQLE-204ENST00000520493 MTFR1Q15390 333 aa8.03□□□□□ -1.12
SQLE-204ENST00000520493 TPCN2Q8NHX9 752 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 130.3 ms