RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 STAP2Q9UGK3 403 aa31.64■■■□□ 2.66
COL13A1-213ENST00000520267 NPHP3Q7Z494 1330 aa31.64■■■□□ 2.66
COL13A1-213ENST00000520267 SCN11AQ9UI33 1791 aa31.64■■■□□ 2.66
COL13A1-213ENST00000520267 REC8O95072 547 aa31.63■■■□□ 2.65
COL13A1-213ENST00000520267 IL1RAPL2Q9NP60 686 aa31.63■■■□□ 2.65
COL13A1-213ENST00000520267 SURF6O75683 361 aaKnown RBP31.63■■■□□ 2.65
COL13A1-213ENST00000520267 HSPA2P54652 639 aa31.63■■■□□ 2.65
COL13A1-213ENST00000520267 FOXD4L1Q9NU39 408 aa31.63■■■□□ 2.65
COL13A1-213ENST00000520267 MAP3K2Q9Y2U5 619 aa31.63■■■□□ 2.65
COL13A1-213ENST00000520267 TNS3Q68CZ2 1445 aa31.62■■■□□ 2.65
COL13A1-213ENST00000520267 SRGAP3O43295 1099 aa31.62■■■□□ 2.65
COL13A1-213ENST00000520267 TATP17735 454 aaPredicted RBP31.61■■■□□ 2.65
COL13A1-213ENST00000520267 MEGF6O75095 1541 aa31.61■■■□□ 2.65
COL13A1-213ENST00000520267 KDM6AO15550 1401 aaPredicted RBP31.61■■■□□ 2.65
COL13A1-213ENST00000520267 RAB11FIP3O75154 756 aa31.61■■■□□ 2.65
COL13A1-213ENST00000520267 CHRNA2Q15822 529 aa31.6■■■□□ 2.65
COL13A1-213ENST00000520267 HSP90AA1P07900 732 aaKnown RBP31.6■■■□□ 2.65
COL13A1-213ENST00000520267 KSR2Q6VAB6 950 aa31.6■■■□□ 2.65
COL13A1-213ENST00000520267 CIZ1Q9ULV3 898 aaPredicted RBP31.6■■■□□ 2.65
COL13A1-213ENST00000520267 PHKG2P15735 406 aa31.59■■■□□ 2.65
COL13A1-213ENST00000520267 CSB-PGBD3P0DP91 1061 aa31.59■■■□□ 2.65
COL13A1-213ENST00000520267 SLC39A6Q13433 755 aa31.59■■■□□ 2.65
COL13A1-213ENST00000520267 SLC52A2Q9HAB3 445 aa31.58■■■□□ 2.65
COL13A1-213ENST00000520267 NUTM1Q86Y26 1132 aa31.58■■■□□ 2.65
COL13A1-213ENST00000520267 RHPN1Q8TCX5 695 aa31.58■■■□□ 2.65
COL13A1-213ENST00000520267 RILPL2Q969X0 211 aa31.58■■■□□ 2.65
COL13A1-213ENST00000520267 HYPKQ9NX55 129 aa31.58■■■□□ 2.65
COL13A1-213ENST00000520267 SPG7Q9UQ90 795 aa31.58■■■□□ 2.65
COL13A1-213ENST00000520267 XIRP1Q702N8 1843 aaKnown RBP31.57■■■□□ 2.64
COL13A1-213ENST00000520267 SPATA31A3Q5VYP0 1347 aa31.56■■■□□ 2.64
COL13A1-213ENST00000520267 C5P01031 1676 aa31.56■■■□□ 2.64
COL13A1-213ENST00000520267 TRIM6-TRIM34B2RNG4 842 aa31.56■■■□□ 2.64
COL13A1-213ENST00000520267 ZNF790Q6PG37 636 aa31.56■■■□□ 2.64
COL13A1-213ENST00000520267 AOX1Q06278 1338 aa31.56■■■□□ 2.64
COL13A1-213ENST00000520267 ESYT1Q9BSJ8 1104 aa31.56■■■□□ 2.64
COL13A1-213ENST00000520267 ALDH1L1O75891 902 aa31.55■■■□□ 2.64
COL13A1-213ENST00000520267 UNC5CLQ8IV45 518 aa31.55■■■□□ 2.64
COL13A1-213ENST00000520267 PDIA6Q15084 440 aa31.55■■■□□ 2.64
COL13A1-213ENST00000520267 DDX21Q9NR30 783 aaKnown RBP eCLIP31.55■■■□□ 2.64
COL13A1-213ENST00000520267 NFATC2IPQ8NCF5 419 aa31.54■■■□□ 2.64
COL13A1-213ENST00000520267 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP31.54■■■□□ 2.64
COL13A1-213ENST00000520267 CHMLP26374 656 aa31.54■■■□□ 2.64
COL13A1-213ENST00000520267 RAB3GAP1Q15042 981 aa31.54■■■□□ 2.64
COL13A1-213ENST00000520267 CWF19L2Q2TBE0 894 aaKnown RBP31.54■■■□□ 2.64
COL13A1-213ENST00000520267 TNPO1Q92973 898 aaKnown RBP31.54■■■□□ 2.64
COL13A1-213ENST00000520267 ABCC6O95255 1503 aa31.53■■■□□ 2.64
COL13A1-213ENST00000520267 KIF1BPQ96EK5 621 aa31.53■■■□□ 2.64
COL13A1-213ENST00000520267 IFNL2Q8IZJ0 200 aa31.52■■■□□ 2.64
COL13A1-213ENST00000520267 C9orf78Q9NZ63 289 aaPredicted RBP31.52■■■□□ 2.64
COL13A1-213ENST00000520267 AIMP1Q12904 312 aaKnown RBP31.51■■■□□ 2.64
COL13A1-213ENST00000520267 MTX1Q13505 466 aa31.51■■■□□ 2.63
COL13A1-213ENST00000520267 CYP27B1O15528 508 aa31.49■■■□□ 2.63
COL13A1-213ENST00000520267 PI4K2BQ8TCG2 481 aa31.49■■■□□ 2.63
COL13A1-213ENST00000520267 PKD1L3Q7Z443 1732 aa31.48■■■□□ 2.63
COL13A1-213ENST00000520267 AK9Q5TCS8 1911 aa31.48■■■□□ 2.63
COL13A1-213ENST00000520267 LINS1Q8NG48 757 aa31.48■■■□□ 2.63
COL13A1-213ENST00000520267 CPDO75976 1380 aa31.48■■■□□ 2.63
COL13A1-213ENST00000520267 DDX58O95786 925 aaKnown RBP31.47■■■□□ 2.63
COL13A1-213ENST00000520267 HSP90AB4PQ58FF6 505 aa31.47■■■□□ 2.63
COL13A1-213ENST00000520267 BRINP3Q76B58 766 aa31.47■■■□□ 2.63
COL13A1-213ENST00000520267 ZNF496Q96IT1 587 aaPredicted RBP31.46■■■□□ 2.63
COL13A1-213ENST00000520267 DDX11L8A8MPP1 907 aa31.46■■■□□ 2.63
COL13A1-213ENST00000520267 ST18O60284 1047 aa31.46■■■□□ 2.63
COL13A1-213ENST00000520267 TRAK2O60296 914 aa31.46■■■□□ 2.63
COL13A1-213ENST00000520267 MAP4K4O95819 1239 aaPredicted RBP31.45■■■□□ 2.63
COL13A1-213ENST00000520267 DCAF5Q96JK2 942 aa31.45■■■□□ 2.63
COL13A1-213ENST00000520267 MRC1P22897 1456 aa31.45■■■□□ 2.63
COL13A1-213ENST00000520267 MYL6BP14649 208 aa31.45■■■□□ 2.62
COL13A1-213ENST00000520267 GRM8O00222 908 aa31.44■■■□□ 2.62
COL13A1-213ENST00000520267 OS9Q13438 667 aaPredicted RBP31.44■■■□□ 2.62
COL13A1-213ENST00000520267 PLEKHG2Q9H7P9 1386 aa31.43■■■□□ 2.62
COL13A1-213ENST00000520267 UTYO14607 1347 aa31.43■■■□□ 2.62
COL13A1-213ENST00000520267 SUCLG2Q96I99 432 aa31.43■■■□□ 2.62
COL13A1-213ENST00000520267 ANO2Q9NQ90 1003 aa31.43■■■□□ 2.62
COL13A1-213ENST00000520267 RIC3Q7Z5B4 369 aa31.42■■■□□ 2.62
COL13A1-213ENST00000520267 KAZALD1Q96I82 304 aa31.42■■■□□ 2.62
COL13A1-213ENST00000520267 PA2G4Q9UQ80 394 aaKnown RBP31.42■■■□□ 2.62
COL13A1-213ENST00000520267 HDAC5Q9UQL6 1122 aa31.42■■■□□ 2.62
COL13A1-213ENST00000520267 IGKV5-2P06315 115 aa31.41■■■□□ 2.62
COL13A1-213ENST00000520267 SSFA2P28290 1259 aa31.41■■■□□ 2.62
COL13A1-213ENST00000520267 GBP4Q96PP9 640 aa31.41■■■□□ 2.62
COL13A1-213ENST00000520267 IL25Q9H293 177 aa31.41■■■□□ 2.62
COL13A1-213ENST00000520267 XAGE3Q8WTP9 111 aa31.41■■■□□ 2.62
COL13A1-213ENST00000520267 PALD1Q9ULE6 856 aa31.4■■■□□ 2.62
COL13A1-213ENST00000520267 USP16Q9Y5T5 823 aa31.4■■■□□ 2.62
COL13A1-213ENST00000520267 TTC5Q8N0Z6 440 aa31.39■■■□□ 2.62
COL13A1-213ENST00000520267 GZF1Q9H116 711 aaPredicted RBP31.39■■■□□ 2.62
COL13A1-213ENST00000520267 BRPF3Q9ULD4 1205 aa31.39■■■□□ 2.62
COL13A1-213ENST00000520267 USP42Q9H9J4 1324 aaKnown RBP31.39■■■□□ 2.62
COL13A1-213ENST00000520267 LARP1Q6PKG0 1096 aaKnown RBP31.38■■■□□ 2.61
COL13A1-213ENST00000520267 COPS6Q7L5N1 327 aa31.38■■■□□ 2.61
COL13A1-213ENST00000520267 SNRPA1P09661 255 aaKnown RBP31.38■■■□□ 2.61
COL13A1-213ENST00000520267 MCCP23508 829 aa31.38■■■□□ 2.61
COL13A1-213ENST00000520267 BICC1Q9H694 974 aaKnown RBP31.38■■■□□ 2.61
COL13A1-213ENST00000520267 STRCQ7RTU9 1775 aa31.37■■■□□ 2.61
COL13A1-213ENST00000520267 NEK4P51957 841 aa31.36■■■□□ 2.61
COL13A1-213ENST00000520267 LRP10Q7Z4F1 713 aa31.36■■■□□ 2.61
COL13A1-213ENST00000520267 CLASRPQ8N2M8 674 aaKnown RBP31.36■■■□□ 2.61
COL13A1-213ENST00000520267 PIP4K2AP48426 406 aaPredicted RBP31.36■■■□□ 2.61
COL13A1-213ENST00000520267 IL27Q8NEV9 243 aa31.36■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms