RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 EIF2S2P20042 333 aaKnown RBP22.91■■□□□ 1.26
SDC2-205ENST00000520233 KCNQ4P56696 695 aa22.91■■□□□ 1.26
SDC2-205ENST00000520233 CCDC30Q5VVM6 783 aa22.9■■□□□ 1.26
SDC2-205ENST00000520233 EZH2Q15910 746 aaKnown RBP22.89■■□□□ 1.25
SDC2-205ENST00000520233 DEFB132Q7Z7B7 95 aa22.89■■□□□ 1.25
SDC2-205ENST00000520233 LINC00116Q8NCU8 138 aa22.89■■□□□ 1.25
SDC2-205ENST00000520233 ERBB4Q15303 1308 aa22.88■■□□□ 1.25
SDC2-205ENST00000520233 NECTIN2Q92692 538 aa22.88■■□□□ 1.25
SDC2-205ENST00000520233 EP400Q96L91 3159 aa22.87■■□□□ 1.25
SDC2-205ENST00000520233 ALDH1L2Q3SY69 923 aa22.87■■□□□ 1.25
SDC2-205ENST00000520233 COL5A3P25940 1745 aaPredicted RBP22.87■■□□□ 1.25
SDC2-205ENST00000520233 CNTNAP4Q9C0A0 1308 aa22.86■■□□□ 1.25
SDC2-205ENST00000520233 CRKLP46109 303 aaKnown RBP22.86■■□□□ 1.25
SDC2-205ENST00000520233 RARSP54136 660 aaKnown RBP22.86■■□□□ 1.25
SDC2-205ENST00000520233 RC3H1Q5TC82 1133 aaKnown RBP22.86■■□□□ 1.25
SDC2-205ENST00000520233 STK31Q9BXU1 1019 aa22.86■■□□□ 1.25
SDC2-205ENST00000520233 CCDC87Q9NVE4 849 aa22.86■■□□□ 1.25
SDC2-205ENST00000520233 DBF4Q9UBU7 674 aaPredicted RBP22.86■■□□□ 1.25
SDC2-205ENST00000520233 TAF1LQ8IZX4 1826 aa22.85■■□□□ 1.25
SDC2-205ENST00000520233 A1BGP04217 495 aa22.85■■□□□ 1.25
SDC2-205ENST00000520233 PDIA6Q15084 440 aa22.85■■□□□ 1.25
SDC2-205ENST00000520233 INTS5Q6P9B9 1019 aaKnown RBP22.85■■□□□ 1.25
SDC2-205ENST00000520233 DDX21Q9NR30 783 aaKnown RBP eCLIP22.85■■□□□ 1.25
SDC2-205ENST00000520233 SSH1Q8WYL5 1049 aa22.84■■□□□ 1.25
SDC2-205ENST00000520233 CHPF2Q9P2E5 772 aa22.84■■□□□ 1.25
SDC2-205ENST00000520233 RCAN3Q9UKA8 241 aa22.84■■□□□ 1.25
SDC2-205ENST00000520233 NBPF26B4DH59 902 aa22.83■■□□□ 1.25
SDC2-205ENST00000520233 TCERG1O14776 1098 aaKnown RBP22.83■■□□□ 1.25
SDC2-205ENST00000520233 NBPF14Q5TI25 921 aa22.83■■□□□ 1.25
SDC2-205ENST00000520233 NBPF10Q6P3W6 841 aaKnown RBP22.83■■□□□ 1.25
SDC2-205ENST00000520233 NBPF15Q8N660 670 aa22.83■■□□□ 1.25
SDC2-205ENST00000520233 ZBTB1Q9Y2K1 713 aa22.83■■□□□ 1.25
SDC2-205ENST00000520233 C4BP0C0L5 1744 aa22.82■■□□□ 1.24
SDC2-205ENST00000520233 RREB1Q92766 1687 aa22.82■■□□□ 1.24
SDC2-205ENST00000520233 CENPBP07199 599 aaPredicted RBP22.82■■□□□ 1.24
SDC2-205ENST00000520233 SLC4A2P04920 1241 aa22.81■■□□□ 1.24
SDC2-205ENST00000520233 CANXP27824 592 aaKnown RBP22.81■■□□□ 1.24
SDC2-205ENST00000520233 BRPF1P55201 1214 aaPredicted RBP22.81■■□□□ 1.24
SDC2-205ENST00000520233 MRPL50Q8N5N7 158 aaKnown RBP22.81■■□□□ 1.24
SDC2-205ENST00000520233 SMC4Q9NTJ3 1288 aa22.81■■□□□ 1.24
SDC2-205ENST00000520233 HYPKQ9NX55 129 aa22.81■■□□□ 1.24
SDC2-205ENST00000520233 MYL6BP14649 208 aa22.8■■□□□ 1.24
SDC2-205ENST00000520233 IL6STP40189 918 aaPredicted RBP22.8■■□□□ 1.24
SDC2-205ENST00000520233 PIP4K2AP48426 406 aaPredicted RBP22.8■■□□□ 1.24
SDC2-205ENST00000520233 PROSER3Q2NL68 480 aa22.8■■□□□ 1.24
SDC2-205ENST00000520233 LRP10Q7Z4F1 713 aa22.8■■□□□ 1.24
SDC2-205ENST00000520233 AK7Q96M32 723 aa22.8■■□□□ 1.24
SDC2-205ENST00000520233 BCL2L13Q9BXK5 485 aa22.8■■□□□ 1.24
SDC2-205ENST00000520233 RPS6KA4O75676 772 aa22.79■■□□□ 1.24
SDC2-205ENST00000520233 ANXA1P04083 346 aa22.79■■□□□ 1.24
SDC2-205ENST00000520233 BCAR3O75815 825 aa22.78■■□□□ 1.24
SDC2-205ENST00000520233 AKT1S1Q96B36 256 aa22.78■■□□□ 1.24
SDC2-205ENST00000520233 MYH14Q7Z406 1995 aaKnown RBP22.78■■□□□ 1.24
SDC2-205ENST00000520233 GNPATO15228 680 aa22.77■■□□□ 1.24
SDC2-205ENST00000520233 EIF5P55010 431 aaKnown RBP22.77■■□□□ 1.24
SDC2-205ENST00000520233 RTCBQ9Y3I0 505 aaKnown RBP22.77■■□□□ 1.24
SDC2-205ENST00000520233 NUP188Q5SRE5 1749 aa22.77■■□□□ 1.23
SDC2-205ENST00000520233 PHAXQ9H814 394 aaKnown RBP22.76■■□□□ 1.23
SDC2-205ENST00000520233 ZNF827Q17R98 1081 aa22.75■■□□□ 1.23
SDC2-205ENST00000520233 G2E3Q7L622 706 aa22.75■■□□□ 1.23
SDC2-205ENST00000520233 NPM2Q86SE8 214 aaKnown RBP22.75■■□□□ 1.23
SDC2-205ENST00000520233 KIF16BQ96L93 1317 aa22.75■■□□□ 1.23
SDC2-205ENST00000520233 FLIIQ13045 1269 aa22.74■■□□□ 1.23
SDC2-205ENST00000520233 COPS6Q7L5N1 327 aa22.74■■□□□ 1.23
SDC2-205ENST00000520233 XAGE3Q8WTP9 111 aa22.74■■□□□ 1.23
SDC2-205ENST00000520233 STK32BQ9NY57 414 aa22.74■■□□□ 1.23
SDC2-205ENST00000520233 ZNF330Q9Y3S2 320 aaPredicted RBP22.74■■□□□ 1.23
SDC2-205ENST00000520233 CACNA1FO60840 1977 aa22.74■■□□□ 1.23
SDC2-205ENST00000520233 A0A087WZG4 1122 aa22.73■■□□□ 1.23
SDC2-205ENST00000520233 SSFA2P28290 1259 aa22.73■■□□□ 1.23
SDC2-205ENST00000520233 SLC15A2Q16348 729 aa22.73■■□□□ 1.23
SDC2-205ENST00000520233 ANO8Q9HCE9 1232 aaPredicted RBP22.73■■□□□ 1.23
SDC2-205ENST00000520233 COL15A1P39059 1388 aa22.73■■□□□ 1.23
SDC2-205ENST00000520233 ADRA2BP18089 450 aa22.72■■□□□ 1.23
SDC2-205ENST00000520233 AIMP1Q12904 312 aaKnown RBP22.72■■□□□ 1.23
SDC2-205ENST00000520233 TFCP2L1Q9NZI6 479 aa22.72■■□□□ 1.23
SDC2-205ENST00000520233 NOB1Q9ULX3 412 aaKnown RBP22.72■■□□□ 1.23
SDC2-205ENST00000520233 PTPRCP08575 1304 aa22.72■■□□□ 1.23
SDC2-205ENST00000520233 TRAPPC3LQ5T215 181 aa22.71■■□□□ 1.23
SDC2-205ENST00000520233 AMIGO3Q86WK7 504 aa22.71■■□□□ 1.23
SDC2-205ENST00000520233 UBR3Q6ZT12 1888 aa22.71■■□□□ 1.23
SDC2-205ENST00000520233 IPO8O15397 1037 aaKnown RBP22.7■■□□□ 1.22
SDC2-205ENST00000520233 DDX58O95786 925 aaKnown RBP22.7■■□□□ 1.22
SDC2-205ENST00000520233 TTLL7Q6ZT98 887 aa22.7■■□□□ 1.22
SDC2-205ENST00000520233 DZIP3Q86Y13 1208 aaKnown RBP22.7■■□□□ 1.22
SDC2-205ENST00000520233 FLAD1Q8NFF5 587 aa22.7■■□□□ 1.22
SDC2-205ENST00000520233 ARHGAP45Q92619 1136 aa22.7■■□□□ 1.22
SDC2-205ENST00000520233 FRAT1Q92837 279 aaPredicted RBP22.7■■□□□ 1.22
SDC2-205ENST00000520233 ARHGEF1Q92888 912 aaKnown RBP22.7■■□□□ 1.22
SDC2-205ENST00000520233 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.69■■□□□ 1.22
SDC2-205ENST00000520233 PHF14O94880 888 aa22.69■■□□□ 1.22
SDC2-205ENST00000520233 FKBP5Q13451 457 aaPredicted RBP22.69■■□□□ 1.22
SDC2-205ENST00000520233 KIF6Q6ZMV9 814 aa22.69■■□□□ 1.22
SDC2-205ENST00000520233 SMIM5Q71RC9 77 aa22.69■■□□□ 1.22
SDC2-205ENST00000520233 ZKSCAN2Q63HK3 967 aa22.68■■□□□ 1.22
SDC2-205ENST00000520233 ANKRD13DQ6ZTN6 518 aa22.68■■□□□ 1.22
SDC2-205ENST00000520233 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.68■■□□□ 1.22
SDC2-205ENST00000520233 TBC1D2BQ9UPU7 963 aa22.68■■□□□ 1.22
SDC2-205ENST00000520233 MAP3K15Q6ZN16 1313 aa22.67■■□□□ 1.22
SDC2-205ENST00000520233 KSR2Q6VAB6 950 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms