RNA–Protein interactions for RNA: ENST00000519482.1

TRAPPC9-206, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-206ENST00000519482 RSPH6AQ9H0K4 717 aa16.65■□□□□ 0.26
TRAPPC9-206ENST00000519482 COL15A1P39059 1388 aa16.64■□□□□ 0.26
TRAPPC9-206ENST00000519482 CEMIPQ8WUJ3 1361 aa16.64■□□□□ 0.26
TRAPPC9-206ENST00000519482 STARD3NLO95772 234 aa16.64■□□□□ 0.25
TRAPPC9-206ENST00000519482 TM4SF1P30408 202 aa16.64■□□□□ 0.25
TRAPPC9-206ENST00000519482 USPL1Q5W0Q7 1092 aa16.64■□□□□ 0.25
TRAPPC9-206ENST00000519482 ZNF790Q6PG37 636 aa16.64■□□□□ 0.25
TRAPPC9-206ENST00000519482 PHACTR3Q96KR7 559 aa16.64■□□□□ 0.25
TRAPPC9-206ENST00000519482 TEX13AQ9BXU3 409 aaPredicted RBP16.64■□□□□ 0.25
TRAPPC9-206ENST00000519482 NARFQ9UHQ1 456 aa16.64■□□□□ 0.25
TRAPPC9-206ENST00000519482 ZBTB1Q9Y2K1 713 aa16.64■□□□□ 0.25
TRAPPC9-206ENST00000519482 NRXN2Q9P2S2 1712 aa16.63■□□□□ 0.25
TRAPPC9-206ENST00000519482 DPEP1P16444 411 aa16.63■□□□□ 0.25
TRAPPC9-206ENST00000519482 DDR1Q08345 913 aa16.63■□□□□ 0.25
TRAPPC9-206ENST00000519482 BCS1LQ9Y276 419 aa16.63■□□□□ 0.25
TRAPPC9-206ENST00000519482 HEG1Q9ULI3 1381 aa16.63■□□□□ 0.25
TRAPPC9-206ENST00000519482 POLRMTO00411 1230 aaKnown RBP16.62■□□□□ 0.25
TRAPPC9-206ENST00000519482 FCHSD2O94868 740 aa16.62■□□□□ 0.25
TRAPPC9-206ENST00000519482 U2AF1L5P0DN76 240 aaPredicted RBP16.61■□□□□ 0.25
TRAPPC9-206ENST00000519482 KCNA3P22001 575 aa16.61■□□□□ 0.25
TRAPPC9-206ENST00000519482 U2AF1Q01081 240 aaKnown RBP eCLIP16.61■□□□□ 0.25
TRAPPC9-206ENST00000519482 ZNF496Q96IT1 587 aaPredicted RBP16.61■□□□□ 0.25
TRAPPC9-206ENST00000519482 A0A087WZG4 1122 aa16.6■□□□□ 0.25
TRAPPC9-206ENST00000519482 FMNL2Q96PY5 1086 aa16.6■□□□□ 0.25
TRAPPC9-206ENST00000519482 GPBP1L1Q9HC44 474 aaPredicted RBP16.6■□□□□ 0.25
TRAPPC9-206ENST00000519482 PIM2Q9P1W9 311 aa16.6■□□□□ 0.25
TRAPPC9-206ENST00000519482 DLEC1Q9Y238 1755 aa16.59■□□□□ 0.25
TRAPPC9-206ENST00000519482 CANXP27824 592 aaKnown RBP16.59■□□□□ 0.25
TRAPPC9-206ENST00000519482 EIF5P55010 431 aaKnown RBP16.59■□□□□ 0.25
TRAPPC9-206ENST00000519482 SCN7AQ01118 1682 aa16.59■□□□□ 0.25
TRAPPC9-206ENST00000519482 SENP3-EIF4A1A0A087X0R7 540 aa16.58■□□□□ 0.24
TRAPPC9-206ENST00000519482 BTBD11A6QL63 1104 aa16.58■□□□□ 0.24
TRAPPC9-206ENST00000519482 NFIXQ14938 502 aa16.58■□□□□ 0.24
TRAPPC9-206ENST00000519482 RTF1Q92541 710 aaKnown RBP16.58■□□□□ 0.24
TRAPPC9-206ENST00000519482 BCL2L12Q9HB09 334 aa16.58■□□□□ 0.24
TRAPPC9-206ENST00000519482 DLG5Q8TDM6 1919 aa16.58■□□□□ 0.24
TRAPPC9-206ENST00000519482 HTATSF1O43719 755 aaKnown RBP16.57■□□□□ 0.24
TRAPPC9-206ENST00000519482 IL6STP40189 918 aaPredicted RBP16.57■□□□□ 0.24
TRAPPC9-206ENST00000519482 ARHGAP27Q6ZUM4 889 aa16.57■□□□□ 0.24
TRAPPC9-206ENST00000519482 SERPINB2P05120 415 aa16.56■□□□□ 0.24
TRAPPC9-206ENST00000519482 DALRD3Q5D0E6 543 aaKnown RBP16.56■□□□□ 0.24
TRAPPC9-206ENST00000519482 SBF1O95248 1867 aa16.55■□□□□ 0.24
TRAPPC9-206ENST00000519482 ZNF526Q8TF50 670 aaPredicted RBP16.55■□□□□ 0.24
TRAPPC9-206ENST00000519482 BCORQ6W2J9 1755 aa16.55■□□□□ 0.24
TRAPPC9-206ENST00000519482 KCNQ3O43525 872 aa16.54■□□□□ 0.24
TRAPPC9-206ENST00000519482 CHRNA5P30532 468 aa16.54■□□□□ 0.24
TRAPPC9-206ENST00000519482 MCM10Q7L590 875 aa16.54■□□□□ 0.24
TRAPPC9-206ENST00000519482 NPM2Q86SE8 214 aaKnown RBP16.54■□□□□ 0.24
TRAPPC9-206ENST00000519482 NEFMP07197 916 aa16.53■□□□□ 0.24
TRAPPC9-206ENST00000519482 ANKRD31Q8N7Z5 1873 aa16.52■□□□□ 0.24
TRAPPC9-206ENST00000519482 A1BGP04217 495 aa16.52■□□□□ 0.24
TRAPPC9-206ENST00000519482 SNRPA1P09661 255 aaKnown RBP16.51■□□□□ 0.23
TRAPPC9-206ENST00000519482 TAF7Q15545 349 aaPredicted RBP16.51■□□□□ 0.23
TRAPPC9-206ENST00000519482 TBC1D2BQ9UPU7 963 aa16.51■□□□□ 0.23
TRAPPC9-206ENST00000519482 ZNF330Q9Y3S2 320 aaPredicted RBP16.51■□□□□ 0.23
TRAPPC9-206ENST00000519482 USP16Q9Y5T5 823 aa16.51■□□□□ 0.23
TRAPPC9-206ENST00000519482 LAMB4A4D0S4 1761 aa16.51■□□□□ 0.23
TRAPPC9-206ENST00000519482 KDM3BQ7LBC6 1761 aa16.51■□□□□ 0.23
TRAPPC9-206ENST00000519482 DCTN1Q14203 1278 aa16.5■□□□□ 0.23
TRAPPC9-206ENST00000519482 TBC1D9BQ66K14 1250 aa16.5■□□□□ 0.23
TRAPPC9-206ENST00000519482 BICDL1Q6ZP65 573 aa16.5■□□□□ 0.23
TRAPPC9-206ENST00000519482 PNNQ9H307 717 aaKnown RBP16.5■□□□□ 0.23
TRAPPC9-206ENST00000519482 PDZRN3Q9UPQ7 1066 aa16.5■□□□□ 0.23
TRAPPC9-206ENST00000519482 CARMIL3Q8ND23 1372 aa16.5■□□□□ 0.23
TRAPPC9-206ENST00000519482 H0YIN7 160 aa16.49■□□□□ 0.23
TRAPPC9-206ENST00000519482 KIF3CO14782 793 aa16.49■□□□□ 0.23
TRAPPC9-206ENST00000519482 CAMTA2O94983 1202 aa16.49■□□□□ 0.23
TRAPPC9-206ENST00000519482 C9orf131Q5VYM1 1079 aa16.49■□□□□ 0.23
TRAPPC9-206ENST00000519482 CCDC88AQ3V6T2 1871 aa16.48■□□□□ 0.23
TRAPPC9-206ENST00000519482 DZIP3Q86Y13 1208 aaKnown RBP16.48■□□□□ 0.23
TRAPPC9-206ENST00000519482 C2CD5Q86YS7 1000 aa16.48■□□□□ 0.23
TRAPPC9-206ENST00000519482 MIER1Q8N108 512 aa16.48■□□□□ 0.23
TRAPPC9-206ENST00000519482 TTLL6Q8N841 843 aa16.48■□□□□ 0.23
TRAPPC9-206ENST00000519482 PLEKHF1Q96S99 279 aa16.48■□□□□ 0.23
TRAPPC9-206ENST00000519482 PRAMEF22A3QJZ6 481 aa16.47■□□□□ 0.23
TRAPPC9-206ENST00000519482 PDE6BP35913 854 aa16.47■□□□□ 0.23
TRAPPC9-206ENST00000519482 RALBP1Q15311 655 aa16.47■□□□□ 0.23
TRAPPC9-206ENST00000519482 PRR5LQ6MZQ0 368 aa16.47■□□□□ 0.23
TRAPPC9-206ENST00000519482 CLEC4GQ6UXB4 293 aa16.47■□□□□ 0.23
TRAPPC9-206ENST00000519482 PNISRQ8TF01 805 aaKnown RBP16.47■□□□□ 0.23
TRAPPC9-206ENST00000519482 SETDB2Q96T68 719 aa16.47■□□□□ 0.23
TRAPPC9-206ENST00000519482 BRIP1Q9BX63 1249 aa16.47■□□□□ 0.23
TRAPPC9-206ENST00000519482 COL11A2P13942 1736 aaPredicted RBP16.47■□□□□ 0.23
TRAPPC9-206ENST00000519482 RGL2O15211 777 aa16.46■□□□□ 0.23
TRAPPC9-206ENST00000519482 NFE2L2Q16236 605 aa16.46■□□□□ 0.23
TRAPPC9-206ENST00000519482 RNF181Q9P0P0 153 aa16.45■□□□□ 0.22
TRAPPC9-206ENST00000519482 ZNF652Q9Y2D9 606 aa16.45■□□□□ 0.22
TRAPPC9-206ENST00000519482 TNRC6CQ9HCJ0 1690 aaKnown RBP16.45■□□□□ 0.22
TRAPPC9-206ENST00000519482 ARFGEF2Q9Y6D5 1785 aa16.45■□□□□ 0.22
TRAPPC9-206ENST00000519482 CACNA1SQ13698 1873 aa16.45■□□□□ 0.22
TRAPPC9-206ENST00000519482 MAPK8IP3Q9UPT6 1336 aa16.45■□□□□ 0.22
TRAPPC9-206ENST00000519482 TOMM70O94826 608 aa16.44■□□□□ 0.22
TRAPPC9-206ENST00000519482 HSPA6P17066 643 aa16.44■□□□□ 0.22
TRAPPC9-206ENST00000519482 PIP4K2AP48426 406 aaPredicted RBP16.44■□□□□ 0.22
TRAPPC9-206ENST00000519482 CNBD1Q8NA66 436 aa16.44■□□□□ 0.22
TRAPPC9-206ENST00000519482 FER1L6Q2WGJ9 1857 aa16.44■□□□□ 0.22
TRAPPC9-206ENST00000519482 ZC3H4Q9UPT8 1303 aaKnown RBP16.44■□□□□ 0.22
TRAPPC9-206ENST00000519482 DICER1Q9UPY3 1922 aaKnown RBP16.43■□□□□ 0.22
TRAPPC9-206ENST00000519482 NBPF26B4DH59 902 aa16.43■□□□□ 0.22
TRAPPC9-206ENST00000519482 ST5P78524 1137 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms