RNA–Protein interactions for RNA: ENST00000518928.1

TSNARE1-203, Transcript of t-SNARE domain containing 1, humanhuman

TSL 3

Gene TSNARE1, Length 940 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSNARE1-203ENST00000518928 PRAMEF22A3QJZ6 481 aa18.92■□□□□ 0.62
TSNARE1-203ENST00000518928 GRIN3BO60391 1043 aa18.92■□□□□ 0.62
TSNARE1-203ENST00000518928 CANXP27824 592 aaKnown RBP18.92■□□□□ 0.62
TSNARE1-203ENST00000518928 ZNF790Q6PG37 636 aa18.92■□□□□ 0.62
TSNARE1-203ENST00000518928 POLRMTO00411 1230 aaKnown RBP18.91■□□□□ 0.62
TSNARE1-203ENST00000518928 KCNA3P22001 575 aa18.91■□□□□ 0.62
TSNARE1-203ENST00000518928 TEFQ10587 303 aa18.91■□□□□ 0.62
TSNARE1-203ENST00000518928 HEG1Q9ULI3 1381 aa18.91■□□□□ 0.62
TSNARE1-203ENST00000518928 TM4SF1P30408 202 aa18.9■□□□□ 0.62
TSNARE1-203ENST00000518928 PIP4K2AP48426 406 aaPredicted RBP18.9■□□□□ 0.62
TSNARE1-203ENST00000518928 PARP3Q9Y6F1 533 aa18.9■□□□□ 0.62
TSNARE1-203ENST00000518928 BRCA1P38398 1863 aaKnown RBP18.9■□□□□ 0.62
TSNARE1-203ENST00000518928 ATP10DQ9P241 1426 aa18.9■□□□□ 0.62
TSNARE1-203ENST00000518928 TTC5Q8N0Z6 440 aa18.89■□□□□ 0.61
TSNARE1-203ENST00000518928 VSIG10Q8N0Z9 540 aa18.89■□□□□ 0.61
TSNARE1-203ENST00000518928 ADCY9O60503 1353 aa18.89■□□□□ 0.61
TSNARE1-203ENST00000518928 CHRNA5P30532 468 aa18.88■□□□□ 0.61
TSNARE1-203ENST00000518928 NFIXQ14938 502 aa18.88■□□□□ 0.61
TSNARE1-203ENST00000518928 NUDCQ9Y266 331 aa18.88■□□□□ 0.61
TSNARE1-203ENST00000518928 AFDNP55196 1824 aaKnown RBP18.88■□□□□ 0.61
TSNARE1-203ENST00000518928 FCHSD2O94868 740 aa18.87■□□□□ 0.61
TSNARE1-203ENST00000518928 A1BGP04217 495 aa18.87■□□□□ 0.61
TSNARE1-203ENST00000518928 RALBP1Q15311 655 aa18.87■□□□□ 0.61
TSNARE1-203ENST00000518928 CARMIL3Q8ND23 1372 aa18.87■□□□□ 0.61
TSNARE1-203ENST00000518928 NARFQ9UHQ1 456 aa18.87■□□□□ 0.61
TSNARE1-203ENST00000518928 BCS1LQ9Y276 419 aa18.87■□□□□ 0.61
TSNARE1-203ENST00000518928 BTBD11A6QL63 1104 aa18.86■□□□□ 0.61
TSNARE1-203ENST00000518928 ZPR1O75312 459 aa18.86■□□□□ 0.61
TSNARE1-203ENST00000518928 EIF5P55010 431 aaKnown RBP18.86■□□□□ 0.61
TSNARE1-203ENST00000518928 TGFB2P61812 414 aa18.86■□□□□ 0.61
TSNARE1-203ENST00000518928 MIS18AQ9NYP9 233 aa18.86■□□□□ 0.61
TSNARE1-203ENST00000518928 USP16Q9Y5T5 823 aa18.86■□□□□ 0.61
TSNARE1-203ENST00000518928 DLG5Q8TDM6 1919 aa18.85■□□□□ 0.61
TSNARE1-203ENST00000518928 ZNF526Q8TF50 670 aaPredicted RBP18.85■□□□□ 0.61
TSNARE1-203ENST00000518928 PLEKHF1Q96S99 279 aa18.85■□□□□ 0.61
TSNARE1-203ENST00000518928 THUMPD2Q9BTF0 503 aaKnown RBP18.85■□□□□ 0.61
TSNARE1-203ENST00000518928 ZNF330Q9Y3S2 320 aaPredicted RBP18.85■□□□□ 0.61
TSNARE1-203ENST00000518928 NRXN2Q9P2S2 1712 aa18.85■□□□□ 0.61
TSNARE1-203ENST00000518928 TBC1D2BQ9UPU7 963 aa18.84■□□□□ 0.61
TSNARE1-203ENST00000518928 SCN7AQ01118 1682 aa18.84■□□□□ 0.61
TSNARE1-203ENST00000518928 BICDL1Q6ZP65 573 aa18.83■□□□□ 0.6
TSNARE1-203ENST00000518928 CCDC24Q8N4L8 307 aa18.83■□□□□ 0.6
TSNARE1-203ENST00000518928 FMNL2Q96PY5 1086 aa18.83■□□□□ 0.6
TSNARE1-203ENST00000518928 PRKRIP1Q9H875 184 aaPredicted RBP18.83■□□□□ 0.6
TSNARE1-203ENST00000518928 TBC1D9BQ66K14 1250 aa18.82■□□□□ 0.6
TSNARE1-203ENST00000518928 STARD3NLO95772 234 aa18.81■□□□□ 0.6
TSNARE1-203ENST00000518928 C1QTNF8P60827 252 aa18.81■□□□□ 0.6
TSNARE1-203ENST00000518928 MYBBP1AQ9BQG0 1328 aaKnown RBP18.8■□□□□ 0.6
TSNARE1-203ENST00000518928 SERPINB2P05120 415 aa18.8■□□□□ 0.6
TSNARE1-203ENST00000518928 NBPF26B4DH59 902 aa18.79■□□□□ 0.6
TSNARE1-203ENST00000518928 CAMTA2O94983 1202 aa18.79■□□□□ 0.6
TSNARE1-203ENST00000518928 NBPF10Q6P3W6 841 aaKnown RBP18.79■□□□□ 0.6
TSNARE1-203ENST00000518928 NBPF15Q8N660 670 aa18.79■□□□□ 0.6
TSNARE1-203ENST00000518928 RTF1Q92541 710 aaKnown RBP18.79■□□□□ 0.6
TSNARE1-203ENST00000518928 ANKRD31Q8N7Z5 1873 aa18.79■□□□□ 0.6
TSNARE1-203ENST00000518928 GIGYF1O75420 1035 aaPredicted RBP18.78■□□□□ 0.6
TSNARE1-203ENST00000518928 ARHGAP27Q6ZUM4 889 aa18.78■□□□□ 0.6
TSNARE1-203ENST00000518928 ARFGEF1Q9Y6D6 1849 aa18.78■□□□□ 0.6
TSNARE1-203ENST00000518928 BCORQ6W2J9 1755 aa18.78■□□□□ 0.6
TSNARE1-203ENST00000518928 IL6STP40189 918 aaPredicted RBP18.77■□□□□ 0.6
TSNARE1-203ENST00000518928 PIM2Q9P1W9 311 aa18.77■□□□□ 0.6
TSNARE1-203ENST00000518928 KDM3BQ7LBC6 1761 aa18.77■□□□□ 0.6
TSNARE1-203ENST00000518928 NFE2L2Q16236 605 aa18.76■□□□□ 0.59
TSNARE1-203ENST00000518928 COL11A2P13942 1736 aaPredicted RBP18.76■□□□□ 0.59
TSNARE1-203ENST00000518928 HTATSF1O43719 755 aaKnown RBP18.75■□□□□ 0.59
TSNARE1-203ENST00000518928 PRELPP51888 382 aa18.75■□□□□ 0.59
TSNARE1-203ENST00000518928 TAF7Q15545 349 aaPredicted RBP18.75■□□□□ 0.59
TSNARE1-203ENST00000518928 TEX13AQ9BXU3 409 aaPredicted RBP18.75■□□□□ 0.59
TSNARE1-203ENST00000518928 DLEC1Q9Y238 1755 aa18.75■□□□□ 0.59
TSNARE1-203ENST00000518928 SNRPA1P09661 255 aaKnown RBP18.74■□□□□ 0.59
TSNARE1-203ENST00000518928 RASSF7Q02833 373 aa18.74■□□□□ 0.59
TSNARE1-203ENST00000518928 DALRD3Q5D0E6 543 aaKnown RBP18.74■□□□□ 0.59
TSNARE1-203ENST00000518928 PRR5LQ6MZQ0 368 aa18.74■□□□□ 0.59
TSNARE1-203ENST00000518928 GPBP1L1Q9HC44 474 aaPredicted RBP18.74■□□□□ 0.59
TSNARE1-203ENST00000518928 A0A087WZG4 1122 aa18.73■□□□□ 0.59
TSNARE1-203ENST00000518928 SENP3-EIF4A1A0A087X0R7 540 aa18.73■□□□□ 0.59
TSNARE1-203ENST00000518928 DZIP3Q86Y13 1208 aaKnown RBP18.73■□□□□ 0.59
TSNARE1-203ENST00000518928 C9orf131Q5VYM1 1079 aa18.72■□□□□ 0.59
TSNARE1-203ENST00000518928 CCDC146Q8IYE0 955 aa18.72■□□□□ 0.59
TSNARE1-203ENST00000518928 RRP7AQ9Y3A4 280 aaKnown RBP18.72■□□□□ 0.59
TSNARE1-203ENST00000518928 LAMB4A4D0S4 1761 aa18.72■□□□□ 0.59
TSNARE1-203ENST00000518928 KIF3CO14782 793 aa18.71■□□□□ 0.59
TSNARE1-203ENST00000518928 EIF4A1P60842 406 aaKnown RBP18.71■□□□□ 0.59
TSNARE1-203ENST00000518928 C2CD5Q86YS7 1000 aa18.71■□□□□ 0.59
TSNARE1-203ENST00000518928 HLFQ16534 295 aa18.7■□□□□ 0.58
TSNARE1-203ENST00000518928 NMRK2Q9NPI5 230 aa18.69■□□□□ 0.58
TSNARE1-203ENST00000518928 SBF1O95248 1867 aa18.69■□□□□ 0.58
TSNARE1-203ENST00000518928 CEP350Q5VT06 3117 aa18.68■□□□□ 0.58
TSNARE1-203ENST00000518928 CCDC184Q52MB2 194 aa18.68■□□□□ 0.58
TSNARE1-203ENST00000518928 NGEFQ8N5V2 710 aa18.68■□□□□ 0.58
TSNARE1-203ENST00000518928 ZNF219Q9P2Y4 722 aaPredicted RBP18.68■□□□□ 0.58
TSNARE1-203ENST00000518928 MAPK8IP3Q9UPT6 1336 aa18.68■□□□□ 0.58
TSNARE1-203ENST00000518928 RIPK4P57078 832 aa18.67■□□□□ 0.58
TSNARE1-203ENST00000518928 RNF181Q9P0P0 153 aa18.67■□□□□ 0.58
TSNARE1-203ENST00000518928 FAM177BA6PVY3 158 aa18.66■□□□□ 0.58
TSNARE1-203ENST00000518928 NFKBIEO00221 500 aa18.66■□□□□ 0.58
TSNARE1-203ENST00000518928 ANP32CO43423 234 aa18.66■□□□□ 0.58
TSNARE1-203ENST00000518928 TMPOP42166 694 aaKnown RBP18.66■□□□□ 0.58
TSNARE1-203ENST00000518928 TTLL7Q6ZT98 887 aa18.66■□□□□ 0.58
TSNARE1-203ENST00000518928 SETDB2Q96T68 719 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms