RNA–Protein interactions for RNA: ENST00000517838.5

PVT1-206, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 518 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-206ENST00000517838 LOC102724428A0A0B4J2F2 783 aa10.12□□□□□ -0.79
PVT1-206ENST00000517838 A0A0G2JLW4 131 aa10.12□□□□□ -0.79
PVT1-206ENST00000517838 ANP32CO43423 234 aa10.12□□□□□ -0.79
PVT1-206ENST00000517838 HSPA5P11021 654 aaKnown RBP10.12□□□□□ -0.79
PVT1-206ENST00000517838 SIK1P57059 783 aa10.12□□□□□ -0.79
PVT1-206ENST00000517838 HTRA3P83110 453 aa10.12□□□□□ -0.79
PVT1-206ENST00000517838 ITPK1Q13572 414 aa10.12□□□□□ -0.79
PVT1-206ENST00000517838 NKX1-1Q15270 411 aaPredicted RBP10.12□□□□□ -0.79
PVT1-206ENST00000517838 COL13A1Q5TAT6 717 aaPredicted RBP10.12□□□□□ -0.79
PVT1-206ENST00000517838 STK24Q9Y6E0 443 aa10.12□□□□□ -0.79
PVT1-206ENST00000517838 ST20-MTHFSA0A0A6YYL1 179 aa10.11□□□□□ -0.79
PVT1-206ENST00000517838 GNPATO15228 680 aa10.11□□□□□ -0.79
PVT1-206ENST00000517838 MMP10P09238 476 aa10.11□□□□□ -0.79
PVT1-206ENST00000517838 TGFB2P61812 414 aa10.11□□□□□ -0.79
PVT1-206ENST00000517838 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.11□□□□□ -0.798e-7■■■□□ 16.9
PVT1-206ENST00000517838 ASAP1Q9ULH1 1129 aa10.11□□□□□ -0.79
PVT1-206ENST00000517838 BCS1LQ9Y276 419 aa10.11□□□□□ -0.79
PVT1-206ENST00000517838 INSRP06213 1382 aa10.11□□□□□ -0.79
PVT1-206ENST00000517838 ARHGAP27Q6ZUM4 889 aa10.1□□□□□ -0.79
PVT1-206ENST00000517838 HS6ST3Q8IZP7 471 aa10.1□□□□□ -0.79
PVT1-206ENST00000517838 JMYQ8N9B5 988 aa10.1□□□□□ -0.79
PVT1-206ENST00000517838 PXDNLA1KZ92 1463 aa10.1□□□□□ -0.79
PVT1-206ENST00000517838 SMG6Q86US8 1419 aaKnown RBP10.09□□□□□ -0.79
PVT1-206ENST00000517838 ATP6V1AP38606 617 aa10.09□□□□□ -0.79
PVT1-206ENST00000517838 RBM46Q8TBY0 533 aaKnown RBP10.09□□□□□ -0.79
PVT1-206ENST00000517838 KLRG1Q96E93 195 aa10.09□□□□□ -0.79
PVT1-206ENST00000517838 C5P01031 1676 aa10.09□□□□□ -0.79
PVT1-206ENST00000517838 NSD3Q9BZ95 1437 aa10.08□□□□□ -0.8
PVT1-206ENST00000517838 C4BP0C0L5 1744 aa10.08□□□□□ -0.8
PVT1-206ENST00000517838 DPEP1P16444 411 aa10.08□□□□□ -0.8
PVT1-206ENST00000517838 KCNA3P22001 575 aa10.08□□□□□ -0.8
PVT1-206ENST00000517838 TMF1P82094 1093 aa10.08□□□□□ -0.8
PVT1-206ENST00000517838 TRAPPC3LQ5T215 181 aa10.08□□□□□ -0.8
PVT1-206ENST00000517838 NLGN1Q8N2Q7 840 aa10.08□□□□□ -0.8
PVT1-206ENST00000517838 ATG3Q9NT62 314 aa10.08□□□□□ -0.8
PVT1-206ENST00000517838 FLT4P35916 1363 aa10.07□□□□□ -0.8
PVT1-206ENST00000517838 FCHSD2O94868 740 aa10.07□□□□□ -0.8
PVT1-206ENST00000517838 C9orf131Q5VYM1 1079 aa10.07□□□□□ -0.8
PVT1-206ENST00000517838 ARHGEF1Q92888 912 aaKnown RBP10.07□□□□□ -0.8
PVT1-206ENST00000517838 SLC4A9Q96Q91 983 aa10.07□□□□□ -0.8
PVT1-206ENST00000517838 TMOD3Q9NYL9 352 aa10.07□□□□□ -0.8
PVT1-206ENST00000517838 SPG7Q9UQ90 795 aa10.07□□□□□ -0.8
PVT1-206ENST00000517838 EMILIN1Q9Y6C2 1016 aa10.07□□□□□ -0.8
PVT1-206ENST00000517838 PCNTO95613 3336 aa10.07□□□□□ -0.8
PVT1-206ENST00000517838 TOGARAM1Q9Y4F4 1720 aa10.07□□□□□ -0.8
PVT1-206ENST00000517838 CICQ96RK0 1608 aaPredicted RBP10.07□□□□□ -0.8
PVT1-206ENST00000517838 KIF24Q5T7B8 1368 aa10.06□□□□□ -0.8
PVT1-206ENST00000517838 GYS1P13807 737 aa10.06□□□□□ -0.8
PVT1-206ENST00000517838 FSTL1Q12841 308 aa10.06□□□□□ -0.8
PVT1-206ENST00000517838 OTUD5Q96G74 571 aa10.06□□□□□ -0.8
PVT1-206ENST00000517838 RTCBQ9Y3I0 505 aaKnown RBP10.06□□□□□ -0.8
PVT1-206ENST00000517838 C10orf71Q711Q0 1435 aa10.06□□□□□ -0.8
PVT1-206ENST00000517838 SLC24A1O60721 1099 aa10.05□□□□□ -0.8
PVT1-206ENST00000517838 PHKG2P15735 406 aa10.05□□□□□ -0.8
PVT1-206ENST00000517838 C16orf71Q8IYS4 520 aaPredicted RBP10.05□□□□□ -0.8
PVT1-206ENST00000517838 POLR3GLQ9BT43 218 aa10.05□□□□□ -0.8
PVT1-206ENST00000517838 RRAGCQ9HB90 399 aa10.05□□□□□ -0.8
PVT1-206ENST00000517838 RGPD2P0DJD1 1756 aa10.05□□□□□ -0.8
PVT1-206ENST00000517838 PRELPP51888 382 aa10.04□□□□□ -0.8
PVT1-206ENST00000517838 RC3H1Q5TC82 1133 aaKnown RBP10.04□□□□□ -0.8
PVT1-206ENST00000517838 IFNL2Q8IZJ0 200 aa10.04□□□□□ -0.8
PVT1-206ENST00000517838 TNS4Q8IZW8 715 aa10.04□□□□□ -0.8
PVT1-206ENST00000517838 EYA1Q99502 592 aa10.04□□□□□ -0.8
PVT1-206ENST00000517838 CARD14Q9BXL6 1004 aa10.04□□□□□ -0.8
PVT1-206ENST00000517838 CCDC87Q9NVE4 849 aa10.04□□□□□ -0.8
PVT1-206ENST00000517838 GTF3C3Q9Y5Q9 886 aa10.04□□□□□ -0.8
PVT1-206ENST00000517838 NCAPD2Q15021 1401 aa10.04□□□□□ -0.8
PVT1-206ENST00000517838 PPM1GO15355 546 aaPredicted RBP10.03□□□□□ -0.8
PVT1-206ENST00000517838 RPS6KA4O75676 772 aa10.03□□□□□ -0.8
PVT1-206ENST00000517838 FBXO22Q8NEZ5 403 aa10.03□□□□□ -0.8
PVT1-206ENST00000517838 DCAF5Q96JK2 942 aa10.03□□□□□ -0.8
PVT1-206ENST00000517838 MS4A4AQ96JQ5 239 aa10.03□□□□□ -0.8
PVT1-206ENST00000517838 MFRPQ9BY79 579 aa10.03□□□□□ -0.8
PVT1-206ENST00000517838 PIM2Q9P1W9 311 aa10.03□□□□□ -0.8
PVT1-206ENST00000517838 PARP3Q9Y6F1 533 aa10.03□□□□□ -0.8
PVT1-206ENST00000517838 WASHC2AQ641Q2 1341 aa10.03□□□□□ -0.8
PVT1-206ENST00000517838 TAF1LQ8IZX4 1826 aa10.03□□□□□ -0.8
PVT1-206ENST00000517838 KDRP35968 1356 aa10.02□□□□□ -0.8
PVT1-206ENST00000517838 UBR3Q6ZT12 1888 aa10.02□□□□□ -0.8
PVT1-206ENST00000517838 RFC4P35249 363 aa10.02□□□□□ -0.81
PVT1-206ENST00000517838 DPY19L2Q6NUT2 758 aa10.02□□□□□ -0.81
PVT1-206ENST00000517838 MAMSTRQ6ZN01 415 aa10.02□□□□□ -0.81
PVT1-206ENST00000517838 RNF181Q9P0P0 153 aa10.02□□□□□ -0.81
PVT1-206ENST00000517838 KDM2BQ8NHM5 1336 aa10.02□□□□□ -0.81
PVT1-206ENST00000517838 MAP2P11137 1827 aaKnown RBP10.01□□□□□ -0.81
PVT1-206ENST00000517838 CCER2I3L3R5 266 aa10.01□□□□□ -0.81
PVT1-206ENST00000517838 DALRD3Q5D0E6 543 aaKnown RBP10.01□□□□□ -0.81
PVT1-206ENST00000517838 KCPQ6ZWJ8 1503 aa10.01□□□□□ -0.81
PVT1-206ENST00000517838 CNTNAP4Q9C0A0 1308 aa10.01□□□□□ -0.81
PVT1-206ENST00000517838 PLEKHG2Q9H7P9 1386 aa10.01□□□□□ -0.81
PVT1-206ENST00000517838 ERVV-2B6SEH9 535 aa10□□□□□ -0.81
PVT1-206ENST00000517838 CHRNA5P30532 468 aa10□□□□□ -0.81
PVT1-206ENST00000517838 DDR1Q08345 913 aa10□□□□□ -0.81
PVT1-206ENST00000517838 SMC1BQ8NDV3 1235 aa10□□□□□ -0.81
PVT1-206ENST00000517838 POLKQ9UBT6 870 aa10□□□□□ -0.81
PVT1-206ENST00000517838 SRP68Q9UHB9 627 aaKnown RBP10□□□□□ -0.81
PVT1-206ENST00000517838 KIAA1551Q9HCM1 1747 aa9.99□□□□□ -0.81
PVT1-206ENST00000517838 SCUBE2Q9NQ36 999 aa9.99□□□□□ -0.81
PVT1-206ENST00000517838 PTCD1O75127 700 aaKnown RBP9.98□□□□□ -0.81
PVT1-206ENST00000517838 HSPA1AP0DMV8 641 aaKnown RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 215 ms