RNA–Protein interactions for RNA: ENST00000517766.5

CD47-205, Transcript of CD47 molecule, humanhuman

TSL 2

Gene CD47, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-205ENST00000517766 POM121Q96HA1 1249 aa7.84□□□□□ -1.15
CD47-205ENST00000517766 ARID3AQ99856 593 aa7.84□□□□□ -1.15
CD47-205ENST00000517766 YTHDC2Q9H6S0 1430 aaKnown RBP7.84□□□□□ -1.15
CD47-205ENST00000517766 NINLQ9Y2I6 1382 aa7.84□□□□□ -1.16
CD47-205ENST00000517766 PTPRMP28827 1452 aa7.83□□□□□ -1.16
CD47-205ENST00000517766 NRXN3Q9Y4C0 1643 aa7.83□□□□□ -1.16
CD47-205ENST00000517766 RTL5Q5HYW3 569 aaPredicted RBP7.83□□□□□ -1.16
CD47-205ENST00000517766 ZNF697Q5TEC3 545 aa7.83□□□□□ -1.16
CD47-205ENST00000517766 TULP4Q9NRJ4 1543 aa7.83□□□□□ -1.16
CD47-205ENST00000517766 NUTM2BA6NNL0 878 aaPredicted RBP7.82□□□□□ -1.16
CD47-205ENST00000517766 NUTM2EB1AL46 878 aaPredicted RBP7.82□□□□□ -1.16
CD47-205ENST00000517766 SNRPBP14678 240 aaKnown RBP7.82□□□□□ -1.16
CD47-205ENST00000517766 GMPRP36959 345 aa7.82□□□□□ -1.16
CD47-205ENST00000517766 KCNMA1Q12791 1236 aa7.82□□□□□ -1.16
CD47-205ENST00000517766 NUTM2AQ8IVF1 878 aaPredicted RBP7.82□□□□□ -1.16
CD47-205ENST00000517766 ANKRD26Q9UPS8 1709 aa7.81□□□□□ -1.16
CD47-205ENST00000517766 RNF223E7ERA6 249 aa7.81□□□□□ -1.16
CD47-205ENST00000517766 HOXA2O43364 376 aa7.81□□□□□ -1.16
CD47-205ENST00000517766 AP1G2O75843 785 aa7.81□□□□□ -1.16
CD47-205ENST00000517766 AVPP01185 164 aa7.81□□□□□ -1.16
CD47-205ENST00000517766 C1orf115Q9H7X2 142 aa7.81□□□□□ -1.16
CD47-205ENST00000517766 POGKQ9P215 609 aa7.81□□□□□ -1.16
CD47-205ENST00000517766 ATAD2Q6PL18 1390 aa7.81□□□□□ -1.16
CD47-205ENST00000517766 APBB1O00213 710 aa7.8□□□□□ -1.16
CD47-205ENST00000517766 CFHP08603 1231 aa7.8□□□□□ -1.16
CD47-205ENST00000517766 FDX1P10109 184 aa7.8□□□□□ -1.16
CD47-205ENST00000517766 PPP2R1AP30153 589 aa7.8□□□□□ -1.16
CD47-205ENST00000517766 LIAT1Q6ZQX7 453 aa7.8□□□□□ -1.16
CD47-205ENST00000517766 SIRT1Q96EB6 747 aa7.8□□□□□ -1.16
CD47-205ENST00000517766 PCDHGC3Q9UN70 934 aa7.8□□□□□ -1.16
CD47-205ENST00000517766 SUPT16HQ9Y5B9 1047 aaKnown RBP7.8□□□□□ -1.16
CD47-205ENST00000517766 NSD2O96028 1365 aa7.8□□□□□ -1.16
CD47-205ENST00000517766 ANKRD36BQ8N2N9 1353 aa7.8□□□□□ -1.16
CD47-205ENST00000517766 ABCC11Q96J66 1382 aa7.8□□□□□ -1.16
CD47-205ENST00000517766 TMEM2Q9UHN6 1383 aa7.8□□□□□ -1.16
CD47-205ENST00000517766 BLMP54132 1417 aaPredicted RBP7.79□□□□□ -1.16
CD47-205ENST00000517766 SMG6Q86US8 1419 aaKnown RBP7.79□□□□□ -1.16
CD47-205ENST00000517766 LILRB3O75022 631 aa7.79□□□□□ -1.16
CD47-205ENST00000517766 FUT2Q10981 343 aa7.79□□□□□ -1.16
CD47-205ENST00000517766 PDE3BQ13370 1112 aa7.79□□□□□ -1.16
CD47-205ENST00000517766 PPP2R2DQ66LE6 453 aa7.79□□□□□ -1.16
CD47-205ENST00000517766 STK26Q9P289 416 aa7.79□□□□□ -1.16
CD47-205ENST00000517766 KIF20BQ96Q89 1820 aa7.79□□□□□ -1.16
CD47-205ENST00000517766 NSD3Q9BZ95 1437 aa7.78□□□□□ -1.16
CD47-205ENST00000517766 SLIT1O75093 1534 aa7.78□□□□□ -1.16
CD47-205ENST00000517766 CPS1P31327 1500 aa7.78□□□□□ -1.16
CD47-205ENST00000517766 AXIN1O15169 862 aa7.78□□□□□ -1.16
CD47-205ENST00000517766 TMEM259Q4ZIN3 620 aa7.78□□□□□ -1.16
CD47-205ENST00000517766 ERICH6BQ5W0A0 696 aa7.78□□□□□ -1.16
CD47-205ENST00000517766 SLF2Q8IX21 1173 aa7.78□□□□□ -1.16
CD47-205ENST00000517766 SYMPKQ92797 1274 aaKnown RBP7.78□□□□□ -1.16
CD47-205ENST00000517766 PRAM1Q96QH2 718 aa7.78□□□□□ -1.16
CD47-205ENST00000517766 CARD14Q9BXL6 1004 aa7.78□□□□□ -1.16
CD47-205ENST00000517766 SETD1BQ9UPS6 1966 aaKnown RBP7.78□□□□□ -1.16
CD47-205ENST00000517766 TECPR2O15040 1411 aa7.78□□□□□ -1.16
CD47-205ENST00000517766 FAM135BQ49AJ0 1406 aa7.78□□□□□ -1.16
CD47-205ENST00000517766 CGNL1Q0VF96 1302 aa7.78□□□□□ -1.16
CD47-205ENST00000517766 RIMS1Q86UR5 1692 aaKnown RBP7.77□□□□□ -1.17
CD47-205ENST00000517766 DIP2AQ14689 1571 aa7.77□□□□□ -1.17
CD47-205ENST00000517766 ARHGAP23Q9P227 1491 aa7.77□□□□□ -1.17
CD47-205ENST00000517766 PLEKHG1Q9ULL1 1385 aa7.77□□□□□ -1.17
CD47-205ENST00000517766 TRAK2O60296 914 aa7.77□□□□□ -1.17
CD47-205ENST00000517766 SRPK2P78362 688 aaKnown RBP7.77□□□□□ -1.17
CD47-205ENST00000517766 WDR43Q15061 677 aaKnown RBP eCLIP7.77□□□□□ -1.17
CD47-205ENST00000517766 TSC1Q92574 1164 aa7.77□□□□□ -1.17
CD47-205ENST00000517766 SLC12A5Q9H2X9 1139 aa7.77□□□□□ -1.17
CD47-205ENST00000517766 NUDCQ9Y266 331 aa7.77□□□□□ -1.17
CD47-205ENST00000517766 POLR3AO14802 1390 aaPredicted RBP7.76□□□□□ -1.17
CD47-205ENST00000517766 ITSN1Q15811 1721 aa7.76□□□□□ -1.17
CD47-205ENST00000517766 SPDYE5A6NIY4 337 aa7.76□□□□□ -1.17
CD47-205ENST00000517766 A6NJR5 290 aa7.76□□□□□ -1.17
CD47-205ENST00000517766 RAD21O60216 631 aa7.76□□□□□ -1.17
CD47-205ENST00000517766 SLC4A3P48751 1232 aa7.76□□□□□ -1.17
CD47-205ENST00000517766 USP46P62068 366 aa7.76□□□□□ -1.17
CD47-205ENST00000517766 TUSC1Q2TAM9 212 aa7.76□□□□□ -1.17
CD47-205ENST00000517766 PUS10Q3MIT2 529 aaKnown RBP7.76□□□□□ -1.17
CD47-205ENST00000517766 MTMR14Q8NCE2 650 aa7.76□□□□□ -1.17
CD47-205ENST00000517766 BANK1Q8NDB2 785 aa7.76□□□□□ -1.17
CD47-205ENST00000517766 ARXQ96QS3 562 aa7.76□□□□□ -1.17
CD47-205ENST00000517766 ZBTB3Q9H5J0 574 aa7.76□□□□□ -1.17
CD47-205ENST00000517766 TERF2IPQ9NYB0 399 aa7.76□□□□□ -1.17
CD47-205ENST00000517766 COG6Q9Y2V7 657 aa7.76□□□□□ -1.17
CD47-205ENST00000517766 EID1Q9Y6B2 187 aa7.76□□□□□ -1.17
CD47-205ENST00000517766 ZNF142P52746 1687 aaPredicted RBP7.76□□□□□ -1.17
CD47-205ENST00000517766 ADAMTSL3P82987 1691 aa7.76□□□□□ -1.17
CD47-205ENST00000517766 ATP7BP35670 1465 aa7.75□□□□□ -1.17
CD47-205ENST00000517766 AKAP12Q02952 1782 aa7.75□□□□□ -1.17
CD47-205ENST00000517766 C6orf229H3BNL8 230 aa7.75□□□□□ -1.17
CD47-205ENST00000517766 APLP1P51693 650 aa7.75□□□□□ -1.17
CD47-205ENST00000517766 SAFB2Q14151 953 aaKnown RBP eCLIP7.75□□□□□ -1.17
CD47-205ENST00000517766 HDGFL2Q7Z4V5 671 aaPredicted RBP7.75□□□□□ -1.17
CD47-205ENST00000517766 MORC1Q86VD1 984 aa7.75□□□□□ -1.17
CD47-205ENST00000517766 PROSER2Q86WR7 435 aaPredicted RBP7.75□□□□□ -1.17
CD47-205ENST00000517766 THEMISQ8N1K5 641 aaPredicted RBP7.75□□□□□ -1.17
CD47-205ENST00000517766 CDK19Q9BWU1 502 aa7.75□□□□□ -1.17
CD47-205ENST00000517766 ADGRB2O60241 1585 aa7.75□□□□□ -1.17
CD47-205ENST00000517766 MED14O60244 1454 aa7.75□□□□□ -1.17
CD47-205ENST00000517766 METP08581 1390 aa7.74□□□□□ -1.17
CD47-205ENST00000517766 SHPRHQ149N8 1683 aa7.74□□□□□ -1.17
CD47-205ENST00000517766 GJA5P36382 358 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms