RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 POTEB2H3BUK9 544 aa5.41□□□□□ -1.54
SCARNA13-201ENST00000516672 GPR37L1O60883 481 aa5.41□□□□□ -1.54
SCARNA13-201ENST00000516672 TSPY4P0CV99 314 aa5.41□□□□□ -1.54
SCARNA13-201ENST00000516672 TSPY10P0CW01 314 aa5.41□□□□□ -1.54
SCARNA13-201ENST00000516672 FAM109BQ6ICB4 259 aaPredicted RBP5.41□□□□□ -1.54
SCARNA13-201ENST00000516672 TOM1L2Q6ZVM7 507 aa5.41□□□□□ -1.54
SCARNA13-201ENST00000516672 PNMA8AQ86V59 439 aaPredicted RBP5.41□□□□□ -1.54
SCARNA13-201ENST00000516672 AMIGO3Q86WK7 504 aa5.41□□□□□ -1.54
SCARNA13-201ENST00000516672 PHOX2BQ99453 314 aa5.41□□□□□ -1.54
SCARNA13-201ENST00000516672 C11orf16Q9NQ32 467 aa5.41□□□□□ -1.54
SCARNA13-201ENST00000516672 HACL1Q9UJ83 578 aa5.41□□□□□ -1.54
SCARNA13-201ENST00000516672 RGPD8O14715 1765 aaPredicted RBP5.4□□□□□ -1.54
SCARNA13-201ENST00000516672 SMIM22K7EJ46 135 aa5.4□□□□□ -1.54
SCARNA13-201ENST00000516672 NFKBIEO00221 500 aa5.4□□□□□ -1.54
SCARNA13-201ENST00000516672 FBXL18Q96ME1 805 aa5.4□□□□□ -1.54
SCARNA13-201ENST00000516672 LAMB2P55268 1798 aa5.39□□□□□ -1.55
SCARNA13-201ENST00000516672 AKAP11Q9UKA4 1901 aa5.39□□□□□ -1.55
SCARNA13-201ENST00000516672 MED19A0JLT2 244 aaPredicted RBP5.39□□□□□ -1.55
SCARNA13-201ENST00000516672 FAM155AB1AL88 458 aaPredicted RBP5.39□□□□□ -1.55
SCARNA13-201ENST00000516672 PAK3O75914 559 aaPredicted RBP5.39□□□□□ -1.55
SCARNA13-201ENST00000516672 CELF2O95319 508 aaKnown RBP5.39□□□□□ -1.55
SCARNA13-201ENST00000516672 CHRNA5P30532 468 aa5.39□□□□□ -1.55
SCARNA13-201ENST00000516672 RSPH4AQ5TD94 716 aa5.39□□□□□ -1.55
SCARNA13-201ENST00000516672 ZNF292O60281 2723 aa5.39□□□□□ -1.55
SCARNA13-201ENST00000516672 BMP8BP34820 402 aa5.38□□□□□ -1.55
SCARNA13-201ENST00000516672 ST3GAL2Q16842 350 aa5.38□□□□□ -1.55
SCARNA13-201ENST00000516672 MYLIPQ8WY64 445 aa5.38□□□□□ -1.55
SCARNA13-201ENST00000516672 ARMC5Q96C12 935 aa5.38□□□□□ -1.55
SCARNA13-201ENST00000516672 NECAB3Q96P71 396 aaPredicted RBP5.38□□□□□ -1.55
SCARNA13-201ENST00000516672 ASB2Q96Q27 587 aa5.38□□□□□ -1.55
SCARNA13-201ENST00000516672 CSRNP1Q96S65 589 aa5.38□□□□□ -1.55
SCARNA13-201ENST00000516672 ABCC6O95255 1503 aa5.38□□□□□ -1.55
SCARNA13-201ENST00000516672 KIAA0100Q14667 2235 aaKnown RBP5.38□□□□□ -1.55
SCARNA13-201ENST00000516672 C5P01031 1676 aa5.37□□□□□ -1.55
SCARNA13-201ENST00000516672 TOGARAM1Q9Y4F4 1720 aa5.37□□□□□ -1.55
SCARNA13-201ENST00000516672 FASNP49327 2511 aaKnown RBP5.37□□□□□ -1.55
SCARNA13-201ENST00000516672 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.37□□□□□ -1.55
SCARNA13-201ENST00000516672 TBC1D8O95759 1140 aa5.37□□□□□ -1.55
SCARNA13-201ENST00000516672 USP38Q8NB14 1042 aa5.37□□□□□ -1.55
SCARNA13-201ENST00000516672 ATXN2LQ8WWM7 1075 aaKnown RBP5.37□□□□□ -1.55
SCARNA13-201ENST00000516672 GDF15Q99988 308 aa5.37□□□□□ -1.55
SCARNA13-201ENST00000516672 HTATIP2Q9BUP3 242 aa5.37□□□□□ -1.55
SCARNA13-201ENST00000516672 ASH1LQ9NR48 2969 aaKnown RBP5.37□□□□□ -1.55
SCARNA13-201ENST00000516672 INSRP06213 1382 aa5.37□□□□□ -1.55
SCARNA13-201ENST00000516672 DCHS1Q96JQ0 3298 aa5.37□□□□□ -1.55
SCARNA13-201ENST00000516672 IQGAP3Q86VI3 1631 aa5.37□□□□□ -1.55
SCARNA13-201ENST00000516672 GPR25O00155 361 aa5.36□□□□□ -1.55
SCARNA13-201ENST00000516672 FOSL2P15408 326 aa5.36□□□□□ -1.55
SCARNA13-201ENST00000516672 ID4P47928 161 aa5.36□□□□□ -1.55
SCARNA13-201ENST00000516672 SLC4A8Q2Y0W8 1093 aa5.36□□□□□ -1.55
SCARNA13-201ENST00000516672 ZNF697Q5TEC3 545 aa5.36□□□□□ -1.55
SCARNA13-201ENST00000516672 SAMD7Q7Z3H4 446 aa5.36□□□□□ -1.55
SCARNA13-201ENST00000516672 WAPLQ7Z5K2 1190 aa5.36□□□□□ -1.55
SCARNA13-201ENST00000516672 TDHQ8IZJ6 230 aa5.36□□□□□ -1.55
SCARNA13-201ENST00000516672 TRIM17Q9Y577 477 aa5.36□□□□□ -1.55
SCARNA13-201ENST00000516672 GPRASP1Q5JY77 1395 aa5.36□□□□□ -1.55
SCARNA13-201ENST00000516672 FLNBO75369 2602 aaKnown RBP5.35□□□□□ -1.55
SCARNA13-201ENST00000516672 DICER1Q9UPY3 1922 aaKnown RBP5.35□□□□□ -1.55
SCARNA13-201ENST00000516672 CPDO75976 1380 aa5.35□□□□□ -1.55
SCARNA13-201ENST00000516672 RNF123Q5XPI4 1314 aa5.35□□□□□ -1.55
SCARNA13-201ENST00000516672 NUTM2GQ5VZR2 741 aa5.35□□□□□ -1.55
SCARNA13-201ENST00000516672 BICDL1Q6ZP65 573 aa5.35□□□□□ -1.55
SCARNA13-201ENST00000516672 IL27Q8NEV9 243 aa5.35□□□□□ -1.55
SCARNA13-201ENST00000516672 AK7Q96M32 723 aa5.35□□□□□ -1.55
SCARNA13-201ENST00000516672 ACIN1Q9UKV3 1341 aaKnown RBP5.34□□□□□ -1.55
SCARNA13-201ENST00000516672 GFRA3O60609 400 aa5.34□□□□□ -1.55
SCARNA13-201ENST00000516672 HUNKP57058 714 aa5.34□□□□□ -1.55
SCARNA13-201ENST00000516672 SYTL4Q96C24 671 aaPredicted RBP5.34□□□□□ -1.55
SCARNA13-201ENST00000516672 ZNF408Q9H9D4 720 aa5.34□□□□□ -1.55
SCARNA13-201ENST00000516672 SH2B1Q9NRF2 756 aaPredicted RBP5.34□□□□□ -1.55
SCARNA13-201ENST00000516672 C4AP0C0L4 1744 aa5.34□□□□□ -1.56
SCARNA13-201ENST00000516672 ZNF318Q5VUA4 2279 aa5.34□□□□□ -1.56
SCARNA13-201ENST00000516672 FKTNO75072 461 aa5.33□□□□□ -1.56
SCARNA13-201ENST00000516672 RGMBQ6NW40 437 aa5.33□□□□□ -1.56
SCARNA13-201ENST00000516672 OTOP1Q7RTM1 612 aa5.33□□□□□ -1.56
SCARNA13-201ENST00000516672 ZNF333Q96JL9 665 aa5.33□□□□□ -1.56
SCARNA13-201ENST00000516672 KCNH6Q9H252 994 aa5.33□□□□□ -1.56
SCARNA13-201ENST00000516672 PTPN22Q9Y2R2 807 aa5.33□□□□□ -1.56
SCARNA13-201ENST00000516672 WDFY4Q6ZS81 3184 aa5.32□□□□□ -1.56
SCARNA13-201ENST00000516672 SPTBN4Q9H254 2564 aa5.32□□□□□ -1.56
SCARNA13-201ENST00000516672 ZBTB7CA1YPR0 619 aa5.32□□□□□ -1.56
SCARNA13-201ENST00000516672 PRR33A8MZF0 331 aa5.32□□□□□ -1.56
SCARNA13-201ENST00000516672 EVI5O60447 810 aa5.32□□□□□ -1.56
SCARNA13-201ENST00000516672 SSFA2P28290 1259 aa5.32□□□□□ -1.56
SCARNA13-201ENST00000516672 PTPN5P54829 565 aa5.32□□□□□ -1.56
SCARNA13-201ENST00000516672 SRPK2P78362 688 aaKnown RBP5.32□□□□□ -1.56
SCARNA13-201ENST00000516672 MRPS5P82675 430 aaKnown RBP5.32□□□□□ -1.56
SCARNA13-201ENST00000516672 CCDC102AQ96A19 550 aa5.32□□□□□ -1.56
SCARNA13-201ENST00000516672 HNRNPABQ99729 332 aaKnown RBP5.32□□□□□ -1.56
SCARNA13-201ENST00000516672 PARP3Q9Y6F1 533 aa5.32□□□□□ -1.56
SCARNA13-201ENST00000516672 UBR3Q6ZT12 1888 aa5.32□□□□□ -1.56
SCARNA13-201ENST00000516672 CDH23Q9H251 3354 aa5.32□□□□□ -1.56
SCARNA13-201ENST00000516672 NSD3Q9BZ95 1437 aa5.31□□□□□ -1.56
SCARNA13-201ENST00000516672 C4BP0C0L5 1744 aa5.31□□□□□ -1.56
SCARNA13-201ENST00000516672 COL15A1P39059 1388 aa5.31□□□□□ -1.56
SCARNA13-201ENST00000516672 PLEKHH1Q9ULM0 1364 aa5.31□□□□□ -1.56
SCARNA13-201ENST00000516672 WDR17Q8IZU2 1322 aa5.31□□□□□ -1.56
SCARNA13-201ENST00000516672 ZNF541Q9H0D2 1346 aa5.31□□□□□ -1.56
SCARNA13-201ENST00000516672 ECM2O94769 699 aaPredicted RBP5.31□□□□□ -1.56
SCARNA13-201ENST00000516672 MYCP01106 439 aaPredicted RBP5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms