RNA–Protein interactions for RNA: ENST00000515981.1

SCARNA16-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16-201ENST00000515981 KDM3BQ7LBC6 1761 aa12.65□□□□□ -0.38
SCARNA16-201ENST00000515981 UBR2Q8IWV8 1755 aa12.65□□□□□ -0.38
SCARNA16-201ENST00000515981 TJP1Q07157 1748 aa12.65□□□□□ -0.38
SCARNA16-201ENST00000515981 PNPLA7Q6ZV29 1317 aa12.64□□□□□ -0.39
SCARNA16-201ENST00000515981 C5P01031 1676 aa12.64□□□□□ -0.39
SCARNA16-201ENST00000515981 MSH5O43196 834 aa12.64□□□□□ -0.39
SCARNA16-201ENST00000515981 STARD3NLO95772 234 aa12.64□□□□□ -0.39
SCARNA16-201ENST00000515981 EIF2S2P20042 333 aaKnown RBP12.64□□□□□ -0.39
SCARNA16-201ENST00000515981 RC3H1Q5TC82 1133 aaKnown RBP12.64□□□□□ -0.39
SCARNA16-201ENST00000515981 C8orf58Q8NAV2 365 aa12.64□□□□□ -0.39
SCARNA16-201ENST00000515981 ZBTB1Q9Y2K1 713 aa12.64□□□□□ -0.39
SCARNA16-201ENST00000515981 C4BP0C0L5 1744 aa12.64□□□□□ -0.39
SCARNA16-201ENST00000515981 IL16Q14005 1332 aa12.63□□□□□ -0.39
SCARNA16-201ENST00000515981 CNTNAP4Q9C0A0 1308 aa12.63□□□□□ -0.39
SCARNA16-201ENST00000515981 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.63□□□□□ -0.39
SCARNA16-201ENST00000515981 RPS6KA4O75676 772 aa12.63□□□□□ -0.39
SCARNA16-201ENST00000515981 NGEFQ8N5V2 710 aa12.63□□□□□ -0.39
SCARNA16-201ENST00000515981 TSPYL6Q8N831 410 aa12.63□□□□□ -0.39
SCARNA16-201ENST00000515981 TEX13AQ9BXU3 409 aaPredicted RBP12.63□□□□□ -0.39
SCARNA16-201ENST00000515981 NBPF26B4DH59 902 aa12.62□□□□□ -0.39
SCARNA16-201ENST00000515981 DUSP27Q5VZP5 1158 aa12.62□□□□□ -0.39
SCARNA16-201ENST00000515981 NBPF10Q6P3W6 841 aaKnown RBP12.62□□□□□ -0.39
SCARNA16-201ENST00000515981 NBPF15Q8N660 670 aa12.62□□□□□ -0.39
SCARNA16-201ENST00000515981 ARHGEF1Q92888 912 aaKnown RBP12.62□□□□□ -0.39
SCARNA16-201ENST00000515981 RTCBQ9Y3I0 505 aaKnown RBP12.62□□□□□ -0.39
SCARNA16-201ENST00000515981 ZNF330Q9Y3S2 320 aaPredicted RBP12.62□□□□□ -0.39
SCARNA16-201ENST00000515981 FANCIQ9NVI1 1328 aa12.62□□□□□ -0.39
SCARNA16-201ENST00000515981 TUBGCP6Q96RT7 1819 aa12.61□□□□□ -0.39
SCARNA16-201ENST00000515981 ZBTB7AO95365 584 aa12.61□□□□□ -0.39
SCARNA16-201ENST00000515981 ANXA1P04083 346 aa12.61□□□□□ -0.39
SCARNA16-201ENST00000515981 EXOSC9Q06265 439 aaKnown RBP12.61□□□□□ -0.39
SCARNA16-201ENST00000515981 GOLGA2Q08379 1002 aa12.61□□□□□ -0.39
SCARNA16-201ENST00000515981 TRAPPC3LQ5T215 181 aa12.61□□□□□ -0.39
SCARNA16-201ENST00000515981 SRP68Q9UHB9 627 aaKnown RBP12.61□□□□□ -0.39
SCARNA16-201ENST00000515981 ATF5Q9Y2D1 282 aaPredicted RBP12.61□□□□□ -0.39
SCARNA16-201ENST00000515981 COL5A3P25940 1745 aaPredicted RBP12.61□□□□□ -0.39
SCARNA16-201ENST00000515981 ZNF831Q5JPB2 1677 aa12.61□□□□□ -0.39
SCARNA16-201ENST00000515981 TCERG1O14776 1098 aaKnown RBP12.6□□□□□ -0.39
SCARNA16-201ENST00000515981 SLFN5Q08AF3 891 aa12.6□□□□□ -0.39
SCARNA16-201ENST00000515981 PROSER3Q2NL68 480 aa12.6□□□□□ -0.39
SCARNA16-201ENST00000515981 ARXQ96QS3 562 aa12.6□□□□□ -0.39
SCARNA16-201ENST00000515981 SOS1Q07889 1333 aaPredicted RBP12.6□□□□□ -0.39
SCARNA16-201ENST00000515981 UBR3Q6ZT12 1888 aa12.59□□□□□ -0.39
SCARNA16-201ENST00000515981 MYL6BP14649 208 aa12.59□□□□□ -0.39
SCARNA16-201ENST00000515981 SSFA2P28290 1259 aa12.59□□□□□ -0.39
SCARNA16-201ENST00000515981 EIF5P55010 431 aaKnown RBP12.59□□□□□ -0.39
SCARNA16-201ENST00000515981 MSL1Q68DK7 614 aa12.59□□□□□ -0.39
SCARNA16-201ENST00000515981 MYH16Q9H6N6 1097 aa12.59□□□□□ -0.39
SCARNA16-201ENST00000515981 TBC1D2BQ9UPU7 963 aa12.59□□□□□ -0.39
SCARNA16-201ENST00000515981 E9PSI1 815 aa12.58□□□□□ -0.4
SCARNA16-201ENST00000515981 HMGB2P26583 209 aaKnown RBP12.58□□□□□ -0.4
SCARNA16-201ENST00000515981 PDIA6Q15084 440 aa12.58□□□□□ -0.4
SCARNA16-201ENST00000515981 HDGFL1Q5TGJ6 251 aa12.58□□□□□ -0.4
SCARNA16-201ENST00000515981 YTHDC1Q96MU7 727 aaKnown RBP12.58□□□□□ -0.4
SCARNA16-201ENST00000515981 RFC4P35249 363 aa12.57□□□□□ -0.4
SCARNA16-201ENST00000515981 IL6STP40189 918 aaPredicted RBP12.57□□□□□ -0.4
SCARNA16-201ENST00000515981 TWISTNBQ3B726 338 aaPredicted RBP12.57□□□□□ -0.4
SCARNA16-201ENST00000515981 FLAD1Q8NFF5 587 aa12.57□□□□□ -0.4
SCARNA16-201ENST00000515981 CHPF2Q9P2E5 772 aa12.57□□□□□ -0.4
SCARNA16-201ENST00000515981 CICQ96RK0 1608 aaPredicted RBP12.56□□□□□ -0.4
SCARNA16-201ENST00000515981 VAMP4O75379 141 aa12.56□□□□□ -0.4
SCARNA16-201ENST00000515981 USPL1Q5W0Q7 1092 aa12.56□□□□□ -0.4
SCARNA16-201ENST00000515981 TTLL7Q6ZT98 887 aa12.56□□□□□ -0.4
SCARNA16-201ENST00000515981 TRMT2AQ8IZ69 625 aaKnown RBP12.56□□□□□ -0.4
SCARNA16-201ENST00000515981 SRCAPQ6ZRS2 3230 aa12.56□□□□□ -0.4
SCARNA16-201ENST00000515981 COL15A1P39059 1388 aa12.56□□□□□ -0.4
SCARNA16-201ENST00000515981 ADRA2BP18089 450 aa12.55□□□□□ -0.4
SCARNA16-201ENST00000515981 LRP10Q7Z4F1 713 aa12.55□□□□□ -0.4
SCARNA16-201ENST00000515981 CASZ1Q86V15 1759 aa12.54□□□□□ -0.4
SCARNA16-201ENST00000515981 A0A087WZG4 1122 aa12.54□□□□□ -0.4
SCARNA16-201ENST00000515981 ZPR1O75312 459 aa12.54□□□□□ -0.4
SCARNA16-201ENST00000515981 HOXB7P09629 217 aa12.54□□□□□ -0.4
SCARNA16-201ENST00000515981 GYS1P13807 737 aa12.54□□□□□ -0.4
SCARNA16-201ENST00000515981 AIMP1Q12904 312 aaKnown RBP12.54□□□□□ -0.4
SCARNA16-201ENST00000515981 FKBP8Q14318 412 aa12.54□□□□□ -0.4
SCARNA16-201ENST00000515981 DZIP3Q86Y13 1208 aaKnown RBP12.54□□□□□ -0.4
SCARNA16-201ENST00000515981 MTFR1LQ9H019 292 aa12.54□□□□□ -0.4
SCARNA16-201ENST00000515981 BCL2L12Q9HB09 334 aa12.54□□□□□ -0.4
SCARNA16-201ENST00000515981 DDX21Q9NR30 783 aaKnown RBP eCLIP12.54□□□□□ -0.4
SCARNA16-201ENST00000515981 NARFQ9UHQ1 456 aa12.54□□□□□ -0.4
SCARNA16-201ENST00000515981 CAMTA2O94983 1202 aa12.53□□□□□ -0.4
SCARNA16-201ENST00000515981 COPS6Q7L5N1 327 aa12.53□□□□□ -0.4
SCARNA16-201ENST00000515981 G2E3Q7L622 706 aa12.53□□□□□ -0.4
SCARNA16-201ENST00000515981 NPM2Q86SE8 214 aaKnown RBP12.53□□□□□ -0.4
SCARNA16-201ENST00000515981 SLC16A10Q8TF71 515 aa12.53□□□□□ -0.4
SCARNA16-201ENST00000515981 XAGE3Q8WTP9 111 aa12.53□□□□□ -0.4
SCARNA16-201ENST00000515981 PHAXQ9H814 394 aaKnown RBP12.53□□□□□ -0.4
SCARNA16-201ENST00000515981 ZBED9Q6R2W3 1325 aa12.53□□□□□ -0.4
SCARNA16-201ENST00000515981 USP42Q9H9J4 1324 aaKnown RBP12.53□□□□□ -0.4
SCARNA16-201ENST00000515981 QSER1Q2KHR3 1735 aa12.53□□□□□ -0.4
SCARNA16-201ENST00000515981 LAMB4A4D0S4 1761 aa12.53□□□□□ -0.4
SCARNA16-201ENST00000515981 PTGER2P43116 358 aa12.52□□□□□ -0.41
SCARNA16-201ENST00000515981 HLFQ16534 295 aa12.52□□□□□ -0.41
SCARNA16-201ENST00000515981 CCDC30Q5VVM6 783 aa12.52□□□□□ -0.41
SCARNA16-201ENST00000515981 BICDL1Q6ZP65 573 aa12.52□□□□□ -0.41
SCARNA16-201ENST00000515981 ZBTB3Q9H5J0 574 aa12.52□□□□□ -0.41
SCARNA16-201ENST00000515981 SPON1Q9HCB6 807 aa12.52□□□□□ -0.41
SCARNA16-201ENST00000515981 DBF4Q9UBU7 674 aaPredicted RBP12.52□□□□□ -0.41
SCARNA16-201ENST00000515981 ERBB4Q15303 1308 aa12.52□□□□□ -0.41
SCARNA16-201ENST00000515981 SLC4A2P04920 1241 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms