RNA–Protein interactions for RNA: ENST00000515391.5

CDK7-213, Transcript of cyclin dependent kinase 7, humanhuman

TSL 2

Gene CDK7, Length 809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-213ENST00000515391 SOS1Q07889 1333 aaPredicted RBP17.34■□□□□ 0.37
CDK7-213ENST00000515391 WWC3Q9ULE0 1092 aa17.34■□□□□ 0.37
CDK7-213ENST00000515391 USP42Q9H9J4 1324 aaKnown RBP17.33■□□□□ 0.36
CDK7-213ENST00000515391 HTATSF1O43719 755 aaKnown RBP17.33■□□□□ 0.36
CDK7-213ENST00000515391 YBX3P16989 372 aaKnown RBP eCLIP17.33■□□□□ 0.361e-6■■□□□ 12.8
CDK7-213ENST00000515391 FKBP8Q14318 412 aa17.33■□□□□ 0.36
CDK7-213ENST00000515391 FMNL2Q96PY5 1086 aa17.33■□□□□ 0.36
CDK7-213ENST00000515391 THUMPD2Q9BTF0 503 aaKnown RBP17.33■□□□□ 0.36
CDK7-213ENST00000515391 MIS18AQ9NYP9 233 aa17.33■□□□□ 0.36
CDK7-213ENST00000515391 PRAMEF22A3QJZ6 481 aa17.32■□□□□ 0.36
CDK7-213ENST00000515391 NFE2L2Q16236 605 aa17.32■□□□□ 0.36
CDK7-213ENST00000515391 USPL1Q5W0Q7 1092 aa17.32■□□□□ 0.36
CDK7-213ENST00000515391 MAPK8IP3Q9UPT6 1336 aa17.31■□□□□ 0.36
CDK7-213ENST00000515391 STARD3NLO95772 234 aa17.31■□□□□ 0.36
CDK7-213ENST00000515391 PRKRIP1Q9H875 184 aaPredicted RBP17.31■□□□□ 0.36
CDK7-213ENST00000515391 COL15A1P39059 1388 aa17.3■□□□□ 0.36
CDK7-213ENST00000515391 A1BGP04217 495 aa17.3■□□□□ 0.36
CDK7-213ENST00000515391 TAF7Q15545 349 aaPredicted RBP17.3■□□□□ 0.36
CDK7-213ENST00000515391 USP16Q9Y5T5 823 aa17.3■□□□□ 0.36
CDK7-213ENST00000515391 PARP3Q9Y6F1 533 aa17.3■□□□□ 0.36
CDK7-213ENST00000515391 ZPR1O75312 459 aa17.29■□□□□ 0.36
CDK7-213ENST00000515391 PIP4K2AP48426 406 aaPredicted RBP17.29■□□□□ 0.36
CDK7-213ENST00000515391 DDR1Q08345 913 aa17.29■□□□□ 0.36
CDK7-213ENST00000515391 CCDC146Q8IYE0 955 aa17.29■□□□□ 0.36
CDK7-213ENST00000515391 TEX13AQ9BXU3 409 aaPredicted RBP17.29■□□□□ 0.36
CDK7-213ENST00000515391 PNNQ9H307 717 aaKnown RBP17.29■□□□□ 0.36
CDK7-213ENST00000515391 NARFQ9UHQ1 456 aa17.29■□□□□ 0.36
CDK7-213ENST00000515391 ZNF330Q9Y3S2 320 aaPredicted RBP17.29■□□□□ 0.36
CDK7-213ENST00000515391 BCL2L12Q9HB09 334 aa17.28■□□□□ 0.36
CDK7-213ENST00000515391 EIF5P55010 431 aaKnown RBP17.27■□□□□ 0.36
CDK7-213ENST00000515391 RRP7AQ9Y3A4 280 aaKnown RBP17.27■□□□□ 0.36
CDK7-213ENST00000515391 TM4SF1P30408 202 aa17.26■□□□□ 0.35
CDK7-213ENST00000515391 RIPK4P57078 832 aa17.26■□□□□ 0.35
CDK7-213ENST00000515391 TBC1D2BQ9UPU7 963 aa17.26■□□□□ 0.35
CDK7-213ENST00000515391 N4BP2Q86UW6 1770 aaPredicted RBP17.25■□□□□ 0.35
CDK7-213ENST00000515391 C10orf71Q711Q0 1435 aa17.25■□□□□ 0.35
CDK7-213ENST00000515391 A0A0G2JLW4 131 aa17.25■□□□□ 0.35
CDK7-213ENST00000515391 ZNF316A6NFI3 1004 aaPredicted RBP17.25■□□□□ 0.35
CDK7-213ENST00000515391 POLRMTO00411 1230 aaKnown RBP17.25■□□□□ 0.35
CDK7-213ENST00000515391 SNRPA1P09661 255 aaKnown RBP17.25■□□□□ 0.35
CDK7-213ENST00000515391 TMPOP42166 694 aaKnown RBP17.25■□□□□ 0.35
CDK7-213ENST00000515391 NFIXQ14938 502 aa17.25■□□□□ 0.35
CDK7-213ENST00000515391 WDR43Q15061 677 aaKnown RBP eCLIP17.25■□□□□ 0.35
CDK7-213ENST00000515391 NEUROD2Q15784 382 aa17.25■□□□□ 0.35
CDK7-213ENST00000515391 ADAMTS8Q9UP79 889 aa17.25■□□□□ 0.35
CDK7-213ENST00000515391 CHD4Q14839 1912 aa17.25■□□□□ 0.35
CDK7-213ENST00000515391 PXDNLA1KZ92 1463 aa17.24■□□□□ 0.35
CDK7-213ENST00000515391 KIAA1551Q9HCM1 1747 aa17.24■□□□□ 0.35
CDK7-213ENST00000515391 KIF13BQ9NQT8 1826 aa17.24■□□□□ 0.35
CDK7-213ENST00000515391 IL6STP40189 918 aaPredicted RBP17.24■□□□□ 0.35
CDK7-213ENST00000515391 BICDL1Q6ZP65 573 aa17.24■□□□□ 0.35
CDK7-213ENST00000515391 A0A087WZG4 1122 aa17.23■□□□□ 0.35
CDK7-213ENST00000515391 DPEP1P16444 411 aa17.23■□□□□ 0.35
CDK7-213ENST00000515391 GRIN3BO60391 1043 aa17.22■□□□□ 0.35
CDK7-213ENST00000515391 TGFB2P61812 414 aa17.22■□□□□ 0.35
CDK7-213ENST00000515391 CCDC184Q52MB2 194 aa17.22■□□□□ 0.35
CDK7-213ENST00000515391 PNISRQ8TF01 805 aaKnown RBP17.22■□□□□ 0.35
CDK7-213ENST00000515391 RUNDC1Q96C34 613 aa17.22■□□□□ 0.35
CDK7-213ENST00000515391 KDM3BQ7LBC6 1761 aa17.22■□□□□ 0.35
CDK7-213ENST00000515391 NBPF26B4DH59 902 aa17.21■□□□□ 0.35
CDK7-213ENST00000515391 EIF4A1P60842 406 aaKnown RBP17.21■□□□□ 0.35
CDK7-213ENST00000515391 TBC1D9BQ66K14 1250 aa17.21■□□□□ 0.35
CDK7-213ENST00000515391 NBPF10Q6P3W6 841 aaKnown RBP17.21■□□□□ 0.35
CDK7-213ENST00000515391 NBPF15Q8N660 670 aa17.21■□□□□ 0.35
CDK7-213ENST00000515391 AFDNP55196 1824 aaKnown RBP17.2■□□□□ 0.34
CDK7-213ENST00000515391 ZBTB22O15209 634 aa17.2■□□□□ 0.34
CDK7-213ENST00000515391 SERPINB2P05120 415 aa17.2■□□□□ 0.34
CDK7-213ENST00000515391 CHRNA5P30532 468 aa17.2■□□□□ 0.34
CDK7-213ENST00000515391 DZIP3Q86Y13 1208 aaKnown RBP17.2■□□□□ 0.34
CDK7-213ENST00000515391 CAMTA2O94983 1202 aa17.19■□□□□ 0.34
CDK7-213ENST00000515391 KCNA3P22001 575 aa17.19■□□□□ 0.34
CDK7-213ENST00000515391 NPM2Q86SE8 214 aaKnown RBP17.19■□□□□ 0.34
CDK7-213ENST00000515391 BCS1LQ9Y276 419 aa17.19■□□□□ 0.34
CDK7-213ENST00000515391 GIGYF1O75420 1035 aaPredicted RBP17.18■□□□□ 0.34
CDK7-213ENST00000515391 CCDC24Q8N4L8 307 aa17.18■□□□□ 0.34
CDK7-213ENST00000515391 ZNF784Q8NCA9 323 aaPredicted RBP17.18■□□□□ 0.34
CDK7-213ENST00000515391 TSPYL4Q9UJ04 414 aa17.18■□□□□ 0.34
CDK7-213ENST00000515391 TRIM35Q9UPQ4 493 aa17.18■□□□□ 0.34
CDK7-213ENST00000515391 SCN7AQ01118 1682 aa17.17■□□□□ 0.34
CDK7-213ENST00000515391 NGEFQ8N5V2 710 aa17.17■□□□□ 0.34
CDK7-213ENST00000515391 NRXN2Q9P2S2 1712 aa17.16■□□□□ 0.34
CDK7-213ENST00000515391 LAMB4A4D0S4 1761 aa17.16■□□□□ 0.34
CDK7-213ENST00000515391 LMOD3Q0VAK6 560 aa17.16■□□□□ 0.34
CDK7-213ENST00000515391 CARMIL3Q8ND23 1372 aa17.15■□□□□ 0.34
CDK7-213ENST00000515391 LAS1LQ9Y4W2 734 aaKnown RBP17.15■□□□□ 0.34
CDK7-213ENST00000515391 BRCA1P38398 1863 aaKnown RBP17.14■□□□□ 0.33
CDK7-213ENST00000515391 SENP3-EIF4A1A0A087X0R7 540 aa17.14■□□□□ 0.33
CDK7-213ENST00000515391 PIM2Q9P1W9 311 aa17.14■□□□□ 0.33
CDK7-213ENST00000515391 BCORQ6W2J9 1755 aa17.14■□□□□ 0.33
CDK7-213ENST00000515391 APAF1O14727 1248 aa17.13■□□□□ 0.33
CDK7-213ENST00000515391 MYL6BP14649 208 aa17.13■□□□□ 0.33
CDK7-213ENST00000515391 EIF2S2P20042 333 aaKnown RBP17.12■□□□□ 0.33
CDK7-213ENST00000515391 HLFQ16534 295 aa17.12■□□□□ 0.33
CDK7-213ENST00000515391 KRT24Q2M2I5 525 aa17.12■□□□□ 0.33
CDK7-213ENST00000515391 PRR5LQ6MZQ0 368 aa17.12■□□□□ 0.33
CDK7-213ENST00000515391 ARHGAP27Q6ZUM4 889 aa17.12■□□□□ 0.33
CDK7-213ENST00000515391 SETDB2Q96T68 719 aa17.12■□□□□ 0.33
CDK7-213ENST00000515391 CHL1O00533 1208 aa17.11■□□□□ 0.33
CDK7-213ENST00000515391 DALRD3Q5D0E6 543 aaKnown RBP17.11■□□□□ 0.33
CDK7-213ENST00000515391 TTLL7Q6ZT98 887 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms