RNA–Protein interactions for RNA: ENST00000515174.5

SNF8-214, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 823 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-214ENST00000515174 STK31Q9BXU1 1019 aa12.9□□□□□ -0.34
SNF8-214ENST00000515174 BACH2Q9BYV9 841 aa12.9□□□□□ -0.34
SNF8-214ENST00000515174 SPON1Q9HCB6 807 aa12.9□□□□□ -0.34
SNF8-214ENST00000515174 C5P01031 1676 aa12.89□□□□□ -0.35
SNF8-214ENST00000515174 CARD10Q9BWT7 1032 aa12.89□□□□□ -0.35
SNF8-214ENST00000515174 UBR2Q8IWV8 1755 aa12.89□□□□□ -0.35
SNF8-214ENST00000515174 KDM6AO15550 1401 aaPredicted RBP12.88□□□□□ -0.35
SNF8-214ENST00000515174 BTBD11A6QL63 1104 aa12.88□□□□□ -0.35
SNF8-214ENST00000515174 PHKG2P15735 406 aa12.88□□□□□ -0.35
SNF8-214ENST00000515174 PDE4AP27815 886 aa12.88□□□□□ -0.35
SNF8-214ENST00000515174 CCT4P50991 539 aaKnown RBP12.88□□□□□ -0.35
SNF8-214ENST00000515174 LAMB4A4D0S4 1761 aa12.88□□□□□ -0.35
SNF8-214ENST00000515174 TNS1Q9HBL0 1735 aaKnown RBP12.88□□□□□ -0.35
SNF8-214ENST00000515174 MPRIPQ6WCQ1 1025 aa12.87□□□□□ -0.35
SNF8-214ENST00000515174 DCAF5Q96JK2 942 aa12.87□□□□□ -0.35
SNF8-214ENST00000515174 SBF2Q86WG5 1849 aa12.87□□□□□ -0.35
SNF8-214ENST00000515174 KCNQ2O43526 872 aa12.86□□□□□ -0.35
SNF8-214ENST00000515174 NKX1-1Q15270 411 aaPredicted RBP12.86□□□□□ -0.35
SNF8-214ENST00000515174 RPAP2Q8IXW5 612 aaPredicted RBP12.86□□□□□ -0.35
SNF8-214ENST00000515174 GCC1Q96CN9 775 aa12.86□□□□□ -0.35
SNF8-214ENST00000515174 SLC52A2Q9HAB3 445 aa12.86□□□□□ -0.35
SNF8-214ENST00000515174 FLIIQ13045 1269 aa12.85□□□□□ -0.35
SNF8-214ENST00000515174 PDZRN3Q9UPQ7 1066 aa12.85□□□□□ -0.35
SNF8-214ENST00000515174 IBTKQ9P2D0 1353 aaPredicted RBP12.84□□□□□ -0.35
SNF8-214ENST00000515174 NHSQ6T4R5 1651 aa12.84□□□□□ -0.35
SNF8-214ENST00000515174 GIGYF1O75420 1035 aaPredicted RBP12.84□□□□□ -0.35
SNF8-214ENST00000515174 IL2RBP14784 551 aa12.84□□□□□ -0.35
SNF8-214ENST00000515174 FAM161AQ3B820 660 aa12.84□□□□□ -0.35
SNF8-214ENST00000515174 HDGFL1Q5TGJ6 251 aa12.84□□□□□ -0.35
SNF8-214ENST00000515174 PXDNLA1KZ92 1463 aa12.84□□□□□ -0.35
SNF8-214ENST00000515174 ERVV-2B6SEH9 535 aa12.83□□□□□ -0.36
SNF8-214ENST00000515174 CYP27B1O15528 508 aa12.83□□□□□ -0.36
SNF8-214ENST00000515174 BARGINQ6ZT62 677 aa12.83□□□□□ -0.36
SNF8-214ENST00000515174 G2E3Q7L622 706 aa12.83□□□□□ -0.36
SNF8-214ENST00000515174 ZCRB1Q8TBF4 217 aaKnown RBP12.83□□□□□ -0.36
SNF8-214ENST00000515174 KAT6BQ8WYB5 2073 aa12.83□□□□□ -0.36
SNF8-214ENST00000515174 PCDH11XQ9BZA7 1347 aa12.83□□□□□ -0.36
SNF8-214ENST00000515174 PCDH11YQ9BZA8 1340 aa12.83□□□□□ -0.36
SNF8-214ENST00000515174 NUCB1Q02818 461 aa12.82□□□□□ -0.36
SNF8-214ENST00000515174 ZNF790Q6PG37 636 aa12.82□□□□□ -0.36
SNF8-214ENST00000515174 ANKRD44Q8N8A2 993 aa12.82□□□□□ -0.36
SNF8-214ENST00000515174 DBF4Q9UBU7 674 aaPredicted RBP12.82□□□□□ -0.36
SNF8-214ENST00000515174 BTAF1O14981 1849 aa12.81□□□□□ -0.36
SNF8-214ENST00000515174 KCNQ3O43525 872 aa12.81□□□□□ -0.36
SNF8-214ENST00000515174 SIRT2Q8IXJ6 389 aa12.81□□□□□ -0.36
SNF8-214ENST00000515174 DCTPP1Q9H773 170 aa12.81□□□□□ -0.36
SNF8-214ENST00000515174 GNAI3P08754 354 aa12.8□□□□□ -0.36
SNF8-214ENST00000515174 HYPKQ9NX55 129 aa12.8□□□□□ -0.36
SNF8-214ENST00000515174 TJP1Q07157 1748 aa12.79□□□□□ -0.36
SNF8-214ENST00000515174 RGS3P49796 1198 aa12.79□□□□□ -0.36
SNF8-214ENST00000515174 FKBP5Q13451 457 aaPredicted RBP12.79□□□□□ -0.36
SNF8-214ENST00000515174 C8orf34Q49A92 452 aa12.79□□□□□ -0.36
SNF8-214ENST00000515174 NFATC2IPQ8NCF5 419 aa12.79□□□□□ -0.36
SNF8-214ENST00000515174 BCL11BQ9C0K0 894 aaPredicted RBP12.79□□□□□ -0.36
SNF8-214ENST00000515174 NUP188Q5SRE5 1749 aa12.79□□□□□ -0.36
SNF8-214ENST00000515174 N4BP2Q86UW6 1770 aaPredicted RBP12.79□□□□□ -0.36
SNF8-214ENST00000515174 RREB1Q92766 1687 aa12.78□□□□□ -0.36
SNF8-214ENST00000515174 CHD1LQ86WJ1 897 aa12.78□□□□□ -0.36
SNF8-214ENST00000515174 DDX21Q9NR30 783 aaKnown RBP eCLIP12.78□□□□□ -0.36
SNF8-214ENST00000515174 THRAP3Q9Y2W1 955 aaKnown RBP12.78□□□□□ -0.36
SNF8-214ENST00000515174 ATP10DQ9P241 1426 aa12.78□□□□□ -0.36
SNF8-214ENST00000515174 KCPQ6ZWJ8 1503 aa12.78□□□□□ -0.36
SNF8-214ENST00000515174 HMMRO75330 724 aa12.77□□□□□ -0.37
SNF8-214ENST00000515174 ZBTB7AO95365 584 aa12.77□□□□□ -0.37
SNF8-214ENST00000515174 GNAI2P04899 355 aa12.77□□□□□ -0.37
SNF8-214ENST00000515174 SNRPA1P09661 255 aaKnown RBP12.77□□□□□ -0.37
SNF8-214ENST00000515174 CABP4P57796 275 aa12.77□□□□□ -0.37
SNF8-214ENST00000515174 CEP85Q6P2H3 762 aa12.77□□□□□ -0.37
SNF8-214ENST00000515174 SKAP1Q86WV1 359 aa12.77□□□□□ -0.37
SNF8-214ENST00000515174 MEIS3Q99687 375 aa12.77□□□□□ -0.37
SNF8-214ENST00000515174 CDCA7Q9BWT1 371 aaPredicted RBP12.77□□□□□ -0.37
SNF8-214ENST00000515174 ERBB4Q15303 1308 aa12.77□□□□□ -0.37
SNF8-214ENST00000515174 CICQ96RK0 1608 aaPredicted RBP12.77□□□□□ -0.37
SNF8-214ENST00000515174 F6X3S4 739 aa12.76□□□□□ -0.37
SNF8-214ENST00000515174 ALDH1L1O75891 902 aa12.76□□□□□ -0.37
SNF8-214ENST00000515174 EIF2S2P20042 333 aaKnown RBP12.76□□□□□ -0.37
SNF8-214ENST00000515174 ZNF784Q8NCA9 323 aaPredicted RBP12.76□□□□□ -0.37
SNF8-214ENST00000515174 DNAAF4Q8WXU2 420 aa12.76□□□□□ -0.37
SNF8-214ENST00000515174 FMNL2Q96PY5 1086 aa12.76□□□□□ -0.37
SNF8-214ENST00000515174 CHPF2Q9P2E5 772 aa12.76□□□□□ -0.37
SNF8-214ENST00000515174 HDAC5Q9UQL6 1122 aa12.76□□□□□ -0.37
SNF8-214ENST00000515174 COL5A3P25940 1745 aaPredicted RBP12.75□□□□□ -0.37
SNF8-214ENST00000515174 ATP8B2P98198 1209 aa12.75□□□□□ -0.37
SNF8-214ENST00000515174 PDIA6Q15084 440 aa12.75□□□□□ -0.37
SNF8-214ENST00000515174 BEND3Q5T5X7 828 aa12.75□□□□□ -0.37
SNF8-214ENST00000515174 SLC4A10Q6U841 1118 aa12.75□□□□□ -0.37
SNF8-214ENST00000515174 KSR2Q6VAB6 950 aa12.75□□□□□ -0.37
SNF8-214ENST00000515174 DDX54Q8TDD1 881 aaKnown RBP12.75□□□□□ -0.37
SNF8-214ENST00000515174 USP44Q9H0E7 712 aa12.75□□□□□ -0.37
SNF8-214ENST00000515174 PHAXQ9H814 394 aaKnown RBP12.75□□□□□ -0.37
SNF8-214ENST00000515174 ATF5Q9Y2D1 282 aaPredicted RBP12.75□□□□□ -0.37
SNF8-214ENST00000515174 LY75O60449 1722 aa12.74□□□□□ -0.37
SNF8-214ENST00000515174 DDX58O95786 925 aaKnown RBP12.74□□□□□ -0.37
SNF8-214ENST00000515174 ANP32AP39687 249 aaKnown RBP12.74□□□□□ -0.37
SNF8-214ENST00000515174 DDB1Q16531 1140 aa12.74□□□□□ -0.37
SNF8-214ENST00000515174 TTC5Q8N0Z6 440 aa12.74□□□□□ -0.37
SNF8-214ENST00000515174 ZNF496Q96IT1 587 aaPredicted RBP12.74□□□□□ -0.37
SNF8-214ENST00000515174 SRCIN1Q9C0H9 1055 aa12.74□□□□□ -0.37
SNF8-214ENST00000515174 ANO8Q9HCE9 1232 aaPredicted RBP12.74□□□□□ -0.37
SNF8-214ENST00000515174 PI4KAP2A4QPH2 592 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms