RNA–Protein interactions for RNA: ENST00000514621.5

HIPK1-210, Transcript of homeodomain interacting protein kinase 1, human

TSL 4

Gene HIPK1, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HIPK1-210	ENST00000514621	ZNF395	Q9H8N7	513 aa	Predicted RBP	10.04	□□□□□ -0.8
HIPK1-210	ENST00000514621	MYOM3	Q5VTT5	1437 aa		10.04	□□□□□ -0.8
HIPK1-210	ENST00000514621	KIAA1107	Q9UPP5	1409 aa		10.04	□□□□□ -0.8
HIPK1-210	ENST00000514621	TRAPPC8	Q9Y2L5	1435 aa		10.04	□□□□□ -0.8
HIPK1-210	ENST00000514621	PLEKHH2	Q8IVE3	1493 aa		10.04	□□□□□ -0.8
HIPK1-210	ENST00000514621	FIGNL2	A6NMB9	653 aa		10.03	□□□□□ -0.8
HIPK1-210	ENST00000514621	ERVK-9	P63128	1117 aa		10.03	□□□□□ -0.8
HIPK1-210	ENST00000514621	SLFNL1	Q499Z3	407 aa		10.03	□□□□□ -0.8
HIPK1-210	ENST00000514621	RICTOR	Q6R327	1708 aa		10.03	□□□□□ -0.8
HIPK1-210	ENST00000514621	MIA2	Q96PC5	1412 aa		10.02	□□□□□ -0.81
HIPK1-210	ENST00000514621	GMPR	P36959	345 aa		10.02	□□□□□ -0.81
HIPK1-210	ENST00000514621	PTGIR	P43119	386 aa		10.02	□□□□□ -0.81
HIPK1-210	ENST00000514621	POLM	Q9NP87	494 aa	Predicted RBP	10.02	□□□□□ -0.81
HIPK1-210	ENST00000514621	ZNF518A	Q6AHZ1	1483 aa		10.02	□□□□□ -0.81
HIPK1-210	ENST00000514621	ZMYM4	Q5VZL5	1548 aa		10.02	□□□□□ -0.81
HIPK1-210	ENST00000514621	SYCP2	Q9BX26	1530 aa		10.02	□□□□□ -0.81
HIPK1-210	ENST00000514621	PPFIA3	O75145	1194 aa		10.01	□□□□□ -0.81
HIPK1-210	ENST00000514621	VSIG8	P0DPA2	414 aa		10.01	□□□□□ -0.81
HIPK1-210	ENST00000514621	RNF217	Q8TC41	542 aa		10.01	□□□□□ -0.81
HIPK1-210	ENST00000514621	CAMSAP2	Q08AD1	1489 aa		10.01	□□□□□ -0.81
HIPK1-210	ENST00000514621	MBD5	Q9P267	1494 aa		10.01	□□□□□ -0.81
HIPK1-210	ENST00000514621	FGD6	Q6ZV73	1430 aa		10	□□□□□ -0.81
HIPK1-210	ENST00000514621	MAGI2	Q86UL8	1455 aa		10	□□□□□ -0.81
HIPK1-210	ENST00000514621	ATP5J2-PTCD1	G3V325	749 aa		10	□□□□□ -0.81
HIPK1-210	ENST00000514621	SCTR	P47872	440 aa		10	□□□□□ -0.81
HIPK1-210	ENST00000514621	PTS	Q03393	145 aa		10	□□□□□ -0.81
HIPK1-210	ENST00000514621	FOXD4L5	Q5VV16	416 aa	Predicted RBP	10	□□□□□ -0.81
HIPK1-210	ENST00000514621	RNF135	Q8IUD6	432 aa		10	□□□□□ -0.81
HIPK1-210	ENST00000514621	PHTF2	Q8N3S3	785 aa		10	□□□□□ -0.81
HIPK1-210	ENST00000514621	KDM5C	P41229	1560 aa		10	□□□□□ -0.81
HIPK1-210	ENST00000514621	YEATS2	Q9ULM3	1422 aa		9.99	□□□□□ -0.81
HIPK1-210	ENST00000514621	MYC	P01106	439 aa	Predicted RBP	9.99	□□□□□ -0.81
HIPK1-210	ENST00000514621	CYP2U1	Q7Z449	544 aa		9.99	□□□□□ -0.81
HIPK1-210	ENST00000514621	CCDC85A	Q96PX6	553 aa	Predicted RBP	9.99	□□□□□ -0.81
HIPK1-210	ENST00000514621	SPAG9	O60271	1321 aa	Known RBP	9.99	□□□□□ -0.81
HIPK1-210	ENST00000514621	MLH3	Q9UHC1	1453 aa		9.98	□□□□□ -0.81
HIPK1-210	ENST00000514621	ZFYVE16	Q7Z3T8	1539 aa		9.98	□□□□□ -0.81
HIPK1-210	ENST00000514621	DOLK	Q9UPQ8	538 aa		9.98	□□□□□ -0.81
HIPK1-210	ENST00000514621	ARHGEF40	Q8TER5	1519 aa		9.97	□□□□□ -0.81
HIPK1-210	ENST00000514621	INSM1	Q01101	510 aa	Predicted RBP	9.97	□□□□□ -0.81
HIPK1-210	ENST00000514621	TCOF1	Q13428	1488 aa	Known RBP	9.97	□□□□□ -0.81
HIPK1-210	ENST00000514621	PTPN23	Q9H3S7	1636 aa		9.96	□□□□□ -0.81
HIPK1-210	ENST00000514621	USP4	Q13107	963 aa		9.96	□□□□□ -0.82
HIPK1-210	ENST00000514621	CDCA7	Q9BWT1	371 aa	Predicted RBP	9.96	□□□□□ -0.82
HIPK1-210	ENST00000514621	ALG2	Q9H553	416 aa		9.96	□□□□□ -0.82
HIPK1-210	ENST00000514621	CHIC2	Q9UKJ5	165 aa		9.96	□□□□□ -0.82
HIPK1-210	ENST00000514621	ATP10A	O60312	1499 aa		9.96	□□□□□ -0.82
HIPK1-210	ENST00000514621	CCDC141	Q6ZP82	1450 aa		9.96	□□□□□ -0.82
HIPK1-210	ENST00000514621	ARHGEF5	Q12774	1597 aa		9.96	□□□□□ -0.82
HIPK1-210	ENST00000514621	HECW2	Q9P2P5	1572 aa		9.96	□□□□□ -0.82
HIPK1-210	ENST00000514621	TRAK2	O60296	914 aa		9.95	□□□□□ -0.82
HIPK1-210	ENST00000514621	TSPY4	P0CV99	314 aa		9.95	□□□□□ -0.82
HIPK1-210	ENST00000514621	TSPY10	P0CW01	314 aa		9.95	□□□□□ -0.82
HIPK1-210	ENST00000514621	FAM50A	Q14320	339 aa	Known RBP	9.95	□□□□□ -0.82
HIPK1-210	ENST00000514621	MAP7D1	Q3KQU3	841 aa		9.95	□□□□□ -0.82
HIPK1-210	ENST00000514621	CCDC155	Q8N6L0	562 aa		9.95	□□□□□ -0.82
HIPK1-210	ENST00000514621	SIRT1	Q96EB6	747 aa		9.95	□□□□□ -0.82
HIPK1-210	ENST00000514621	OSBPL3	Q9H4L5	887 aa		9.95	□□□□□ -0.82
HIPK1-210	ENST00000514621	KIDINS220	Q9ULH0	1771 aa		9.94	□□□□□ -0.82
HIPK1-210	ENST00000514621	RTEL1-TNFRSF6B	F6WH68	1400 aa		9.94	□□□□□ -0.82
HIPK1-210	ENST00000514621	ABCC5	O15440	1437 aa		9.94	□□□□□ -0.82
HIPK1-210	ENST00000514621		A0A1W2PRU2	124 aa		9.94	□□□□□ -0.82
HIPK1-210	ENST00000514621	SLC35F4	A4IF30	521 aa		9.94	□□□□□ -0.82
HIPK1-210	ENST00000514621	TSGA10IP	Q3SY00	556 aa		9.94	□□□□□ -0.82
HIPK1-210	ENST00000514621	CLUAP1	Q96AJ1	413 aa		9.94	□□□□□ -0.82
HIPK1-210	ENST00000514621	DIP2C	Q9Y2E4	1556 aa		9.93	□□□□□ -0.82
HIPK1-210	ENST00000514621	ATP7A	Q04656	1500 aa		9.93	□□□□□ -0.82
HIPK1-210	ENST00000514621	C9orf84	Q5VXU9	1444 aa		9.93	□□□□□ -0.82
HIPK1-210	ENST00000514621	ARID4B	Q4LE39	1312 aa	Predicted RBP	9.93	□□□□□ -0.82
HIPK1-210	ENST00000514621	SENP3-EIF4A1	A0A087X0R7	540 aa		9.93	□□□□□ -0.82
HIPK1-210	ENST00000514621	RNF144A	P50876	292 aa	Predicted RBP	9.93	□□□□□ -0.82
HIPK1-210	ENST00000514621	OXLD1	Q5BKU9	147 aa		9.93	□□□□□ -0.82
HIPK1-210	ENST00000514621	PROSER2	Q86WR7	435 aa	Predicted RBP	9.93	□□□□□ -0.82
HIPK1-210	ENST00000514621	ABCA6	Q8N139	1617 aa		9.93	□□□□□ -0.82
HIPK1-210	ENST00000514621	INO80	Q9ULG1	1556 aa	Predicted RBP	9.92	□□□□□ -0.82
HIPK1-210	ENST00000514621	DAPK1	P53355	1430 aa		9.92	□□□□□ -0.82
HIPK1-210	ENST00000514621	MEN1	O00255	615 aa		9.92	□□□□□ -0.82
HIPK1-210	ENST00000514621	GNRH1	P01148	92 aa		9.92	□□□□□ -0.82
HIPK1-210	ENST00000514621	PLPP7	Q8NBV4	271 aa		9.92	□□□□□ -0.82
HIPK1-210	ENST00000514621	NLRP3	Q96P20	1036 aa		9.92	□□□□□ -0.82
HIPK1-210	ENST00000514621	SIGLEC1	Q9BZZ2	1709 aa		9.91	□□□□□ -0.82
HIPK1-210	ENST00000514621	LOR	P23490	312 aa	Predicted RBP	9.91	□□□□□ -0.82
HIPK1-210	ENST00000514621	GPC1	P35052	558 aa		9.91	□□□□□ -0.82
HIPK1-210	ENST00000514621	LYSMD3	Q7Z3D4	306 aa		9.91	□□□□□ -0.82
HIPK1-210	ENST00000514621	STK17A	Q9UEE5	414 aa		9.91	□□□□□ -0.82
HIPK1-210	ENST00000514621	RRBP1	Q9P2E9	1410 aa	Known RBP	9.9	□□□□□ -0.82
HIPK1-210	ENST00000514621	DNMT1	P26358	1616 aa	Known RBP	9.9	□□□□□ -0.82
HIPK1-210	ENST00000514621	RERE	Q9P2R6	1566 aa		9.9	□□□□□ -0.82
HIPK1-210	ENST00000514621	MAST1	Q9Y2H9	1570 aa		9.9	□□□□□ -0.82
HIPK1-210	ENST00000514621		A6NJR5	290 aa		9.9	□□□□□ -0.82
HIPK1-210	ENST00000514621	POM121C	A8CG34	1229 aa		9.9	□□□□□ -0.82
HIPK1-210	ENST00000514621	CLN3	Q13286	438 aa		9.9	□□□□□ -0.82
HIPK1-210	ENST00000514621	FNBP4	Q8N3X1	1017 aa	Predicted RBP	9.9	□□□□□ -0.82
HIPK1-210	ENST00000514621	NFATC2IP	Q8NCF5	419 aa		9.9	□□□□□ -0.82
HIPK1-210	ENST00000514621	ARHGEF10L	Q9HCE6	1279 aa		9.9	□□□□□ -0.82
HIPK1-210	ENST00000514621	A2M	P01023	1474 aa		9.9	□□□□□ -0.83
HIPK1-210	ENST00000514621	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	9.89	□□□□□ -0.83
HIPK1-210	ENST00000514621	ITGA6	P23229	1130 aa		9.89	□□□□□ -0.83
HIPK1-210	ENST00000514621	MLEC	Q14165	292 aa		9.89	□□□□□ -0.83
HIPK1-210	ENST00000514621	HDGFL1	Q5TGJ6	251 aa		9.89	□□□□□ -0.83

Retrieved 100 of 20,778 RNA–protein pairs in 149 ms