RNA–Protein interactions for RNA: ENST00000513819.1

NIPBL-207, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 452 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-207ENST00000513819 INSM2Q96T92 566 aaPredicted RBP7.51□□□□□ -1.21
NIPBL-207ENST00000513819 CHMP3Q9Y3E7 222 aa7.51□□□□□ -1.21
NIPBL-207ENST00000513819 SERTM1A2A2V5 107 aa7.5□□□□□ -1.21
NIPBL-207ENST00000513819 EML1O00423 815 aa7.5□□□□□ -1.21
NIPBL-207ENST00000513819 NOS2P35228 1153 aa7.5□□□□□ -1.21
NIPBL-207ENST00000513819 MARSP56192 900 aaKnown RBP7.5□□□□□ -1.21
NIPBL-207ENST00000513819 SF3B2Q13435 895 aaKnown RBP7.5□□□□□ -1.21
NIPBL-207ENST00000513819 TEAD4Q15561 434 aa7.5□□□□□ -1.21
NIPBL-207ENST00000513819 COX20Q5RI15 118 aa7.5□□□□□ -1.21
NIPBL-207ENST00000513819 TMEM214Q6NUQ4 689 aaKnown RBP7.5□□□□□ -1.21
NIPBL-207ENST00000513819 C16orf46Q6P387 395 aa7.5□□□□□ -1.21
NIPBL-207ENST00000513819 PPARGC1BQ86YN6 1023 aaKnown RBP7.5□□□□□ -1.21
NIPBL-207ENST00000513819 LINC00528Q8N1L1 170 aa7.5□□□□□ -1.21
NIPBL-207ENST00000513819 TSEN34Q9BSV6 310 aaKnown RBP7.5□□□□□ -1.21
NIPBL-207ENST00000513819 QTRT2Q9H974 415 aaKnown RBP7.5□□□□□ -1.21
NIPBL-207ENST00000513819 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.5□□□□□ -1.21
NIPBL-207ENST00000513819 ZNF232Q9UNY5 417 aa7.5□□□□□ -1.21
NIPBL-207ENST00000513819 PDZRN3Q9UPQ7 1066 aa7.5□□□□□ -1.21
NIPBL-207ENST00000513819 HCN4Q9Y3Q4 1203 aa7.5□□□□□ -1.21
NIPBL-207ENST00000513819 MPSTP25325 297 aa7.49□□□□□ -1.21
NIPBL-207ENST00000513819 NOM1Q5C9Z4 860 aaKnown RBP7.49□□□□□ -1.21
NIPBL-207ENST00000513819 SLC27A3Q5K4L6 730 aa7.49□□□□□ -1.21
NIPBL-207ENST00000513819 L3MBTL2Q969R5 705 aa7.49□□□□□ -1.21
NIPBL-207ENST00000513819 ZNF428Q96B54 188 aa7.49□□□□□ -1.21
NIPBL-207ENST00000513819 POLMQ9NP87 494 aaPredicted RBP7.49□□□□□ -1.21
NIPBL-207ENST00000513819 FAM187AA6NFU0 413 aa7.48□□□□□ -1.21
NIPBL-207ENST00000513819 SPINT1O43278 529 aa7.48□□□□□ -1.21
NIPBL-207ENST00000513819 CTSOP43234 321 aaPredicted RBP7.48□□□□□ -1.21
NIPBL-207ENST00000513819 ARHGAP4P98171 946 aa7.48□□□□□ -1.21
NIPBL-207ENST00000513819 C6orf118Q5T5N4 469 aa7.48□□□□□ -1.21
NIPBL-207ENST00000513819 POTEAQ6S8J7 498 aa7.48□□□□□ -1.21
NIPBL-207ENST00000513819 DNAJC14Q6Y2X3 702 aaPredicted RBP7.48□□□□□ -1.21
NIPBL-207ENST00000513819 NIFKQ9BYG3 293 aaKnown RBP7.48□□□□□ -1.21
NIPBL-207ENST00000513819 GRIP2Q9C0E4 1043 aa7.48□□□□□ -1.21
NIPBL-207ENST00000513819 LRFN2Q9ULH4 789 aa7.48□□□□□ -1.21
NIPBL-207ENST00000513819 TNFRSF10BO14763 440 aa7.47□□□□□ -1.21
NIPBL-207ENST00000513819 UPP2O95045 317 aa7.47□□□□□ -1.21
NIPBL-207ENST00000513819 BMP2P12643 396 aa7.47□□□□□ -1.21
NIPBL-207ENST00000513819 GTF2E1P29083 439 aaPredicted RBP7.47□□□□□ -1.21
NIPBL-207ENST00000513819 RNF144AP50876 292 aaPredicted RBP7.47□□□□□ -1.21
NIPBL-207ENST00000513819 ALDH16A1Q8IZ83 802 aa7.47□□□□□ -1.21
NIPBL-207ENST00000513819 RHBDD1Q8TEB9 315 aa7.47□□□□□ -1.21
NIPBL-207ENST00000513819 NPR3P17342 541 aa7.46□□□□□ -1.22
NIPBL-207ENST00000513819 MAPK1P28482 360 aa7.46□□□□□ -1.22
NIPBL-207ENST00000513819 GPC1P35052 558 aa7.46□□□□□ -1.22
NIPBL-207ENST00000513819 TXLNAP40222 546 aa7.46□□□□□ -1.22
NIPBL-207ENST00000513819 PLA2G4AP47712 749 aa7.46□□□□□ -1.22
NIPBL-207ENST00000513819 HIRAP54198 1017 aaPredicted RBP7.46□□□□□ -1.22
NIPBL-207ENST00000513819 C4orf17Q53FE4 359 aa7.46□□□□□ -1.22
NIPBL-207ENST00000513819 GNASQ5JWF2 1037 aa7.46□□□□□ -1.22
NIPBL-207ENST00000513819 MYO19Q96H55 970 aa7.46□□□□□ -1.22
NIPBL-207ENST00000513819 PHACTR1Q9C0D0 580 aa7.46□□□□□ -1.22
NIPBL-207ENST00000513819 FAM13AO94988 1023 aa7.45□□□□□ -1.22
NIPBL-207ENST00000513819 BMP1P13497 986 aa7.45□□□□□ -1.22
NIPBL-207ENST00000513819 PHKA2P46019 1235 aa7.45□□□□□ -1.22
NIPBL-207ENST00000513819 RBM25P49756 843 aaKnown RBP7.45□□□□□ -1.22
NIPBL-207ENST00000513819 FAM26DQ5JW98 314 aa7.45□□□□□ -1.22
NIPBL-207ENST00000513819 MRPL14Q6P1L8 145 aaKnown RBP7.45□□□□□ -1.22
NIPBL-207ENST00000513819 STIM2Q9P246 746 aa7.45□□□□□ -1.22
NIPBL-207ENST00000513819 EIF1AXP47813 144 aaKnown RBP7.44□□□□□ -1.22
NIPBL-207ENST00000513819 DGKZQ13574 1117 aa7.44□□□□□ -1.22
NIPBL-207ENST00000513819 RTN1Q16799 776 aa7.44□□□□□ -1.22
NIPBL-207ENST00000513819 PRICKLE2Q7Z3G6 844 aa7.44□□□□□ -1.22
NIPBL-207ENST00000513819 AIDAQ96BJ3 306 aa7.44□□□□□ -1.22
NIPBL-207ENST00000513819 KLK14Q9P0G3 267 aa7.44□□□□□ -1.22
NIPBL-207ENST00000513819 DCTN4Q9UJW0 460 aa7.44□□□□□ -1.22
NIPBL-207ENST00000513819 ANKRD33BA6NCL7 494 aa7.43□□□□□ -1.22
NIPBL-207ENST00000513819 ZBTB39O15060 712 aa7.43□□□□□ -1.22
NIPBL-207ENST00000513819 AVPP01185 164 aa7.43□□□□□ -1.22
NIPBL-207ENST00000513819 RANGAP1P46060 587 aaPredicted RBP7.43□□□□□ -1.22
NIPBL-207ENST00000513819 POU4F2Q12837 409 aa7.43□□□□□ -1.22
NIPBL-207ENST00000513819 AAMPQ13685 434 aa7.43□□□□□ -1.22
NIPBL-207ENST00000513819 RNF217Q8TC41 542 aa7.43□□□□□ -1.22
NIPBL-207ENST00000513819 SPATA31C2B4DYI2 1134 aa7.42□□□□□ -1.22
NIPBL-207ENST00000513819 BRD2P25440 801 aaKnown RBP7.42□□□□□ -1.22
NIPBL-207ENST00000513819 C11orf91Q3C1V1 193 aa7.42□□□□□ -1.22
NIPBL-207ENST00000513819 ETFBKMTQ8IXQ9 262 aa7.42□□□□□ -1.22
NIPBL-207ENST00000513819 AMOTL2Q9Y2J4 779 aa7.42□□□□□ -1.22
NIPBL-207ENST00000513819 FIGNL2A6NMB9 653 aa7.41□□□□□ -1.22
NIPBL-207ENST00000513819 RHOQP17081 205 aa7.41□□□□□ -1.22
NIPBL-207ENST00000513819 ERCC3P19447 782 aa7.41□□□□□ -1.22
NIPBL-207ENST00000513819 NBPF10Q6P3W6 841 aaKnown RBP7.41□□□□□ -1.22
NIPBL-207ENST00000513819 LYSMD3Q7Z3D4 306 aa7.41□□□□□ -1.22
NIPBL-207ENST00000513819 TRIM46Q7Z4K8 759 aa7.41□□□□□ -1.22
NIPBL-207ENST00000513819 ATCAYQ86WG3 371 aa7.41□□□□□ -1.22
NIPBL-207ENST00000513819 ABTB2Q8N961 1025 aa7.41□□□□□ -1.22
NIPBL-207ENST00000513819 KLRG1Q96E93 195 aa7.41□□□□□ -1.22
NIPBL-207ENST00000513819 CCDC87Q9NVE4 849 aa7.41□□□□□ -1.22
NIPBL-207ENST00000513819 TTLL8A6PVC2 850 aa7.4□□□□□ -1.22
NIPBL-207ENST00000513819 FZD6O60353 706 aa7.4□□□□□ -1.22
NIPBL-207ENST00000513819 GFRA3O60609 400 aa7.4□□□□□ -1.22
NIPBL-207ENST00000513819 SCARF1Q14162 830 aa7.4□□□□□ -1.22
NIPBL-207ENST00000513819 NBPF1Q3BBV0 1214 aa7.4□□□□□ -1.22
NIPBL-207ENST00000513819 C1orf53Q5VUE5 145 aa7.4□□□□□ -1.22
NIPBL-207ENST00000513819 ALKBH2Q6NS38 261 aa7.4□□□□□ -1.22
NIPBL-207ENST00000513819 NPAS4Q8IUM7 802 aa7.4□□□□□ -1.22
NIPBL-207ENST00000513819 RHPN1Q8TCX5 695 aa7.4□□□□□ -1.22
NIPBL-207ENST00000513819 IFT43Q96FT9 208 aa7.4□□□□□ -1.22
NIPBL-207ENST00000513819 ASB16Q96NS5 453 aa7.4□□□□□ -1.22
NIPBL-207ENST00000513819 BRPF3Q9ULD4 1205 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms