RNA–Protein interactions for RNA: ENST00000512962.5

SDHA-215, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 3

Gene SDHA, Length 935 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-215ENST00000512962 PKD1L3Q7Z443 1732 aa17.48■□□□□ 0.39
SDHA-215ENST00000512962 HTRA3P83110 453 aa17.48■□□□□ 0.39
SDHA-215ENST00000512962 NBPF6Q5VWK0 638 aa17.48■□□□□ 0.39
SDHA-215ENST00000512962 NBPF4Q96M43 638 aa17.48■□□□□ 0.39
SDHA-215ENST00000512962 PXDNLA1KZ92 1463 aa17.48■□□□□ 0.39
SDHA-215ENST00000512962 PHF14O94880 888 aa17.47■□□□□ 0.39
SDHA-215ENST00000512962 FOXK1P85037 733 aa17.47■□□□□ 0.39
SDHA-215ENST00000512962 DPYSL4O14531 572 aa17.46■□□□□ 0.39
SDHA-215ENST00000512962 MLLT3P42568 568 aaPredicted RBP17.46■□□□□ 0.39
SDHA-215ENST00000512962 APLP1P51693 650 aa17.46■□□□□ 0.39
SDHA-215ENST00000512962 COL13A1Q5TAT6 717 aaPredicted RBP17.46■□□□□ 0.39
SDHA-215ENST00000512962 HDGFL2Q7Z4V5 671 aaPredicted RBP17.46■□□□□ 0.39
SDHA-215ENST00000512962 NMRK2Q9NPI5 230 aa17.45■□□□□ 0.38
SDHA-215ENST00000512962 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.43■□□□□ 0.38
SDHA-215ENST00000512962 PLCG2P16885 1265 aa17.43■□□□□ 0.38
SDHA-215ENST00000512962 RRS1Q15050 365 aaKnown RBP17.43■□□□□ 0.38
SDHA-215ENST00000512962 MPRIPQ6WCQ1 1025 aa17.43■□□□□ 0.38
SDHA-215ENST00000512962 CYP27B1O15528 508 aa17.42■□□□□ 0.38
SDHA-215ENST00000512962 AMPHP49418 695 aa17.42■□□□□ 0.38
SDHA-215ENST00000512962 LINC00116Q8NCU8 138 aa17.42■□□□□ 0.38
SDHA-215ENST00000512962 FLAD1Q8NFF5 587 aa17.42■□□□□ 0.38
SDHA-215ENST00000512962 C2orf72A6NCS6 295 aa17.41■□□□□ 0.38
SDHA-215ENST00000512962 G3V3G9 751 aa17.41■□□□□ 0.38
SDHA-215ENST00000512962 GABBR2O75899 941 aa17.41■□□□□ 0.38
SDHA-215ENST00000512962 TOMM70O94826 608 aa17.41■□□□□ 0.38
SDHA-215ENST00000512962 AK7Q96M32 723 aa17.41■□□□□ 0.38
SDHA-215ENST00000512962 RTL1A6NKG5 1358 aa17.4■□□□□ 0.38
SDHA-215ENST00000512962 PDIA6Q15084 440 aa17.4■□□□□ 0.38
SDHA-215ENST00000512962 PLPP6Q8IY26 295 aa17.4■□□□□ 0.38
SDHA-215ENST00000512962 SLC24A3Q9HC58 644 aa17.4■□□□□ 0.38
SDHA-215ENST00000512962 ZMYND10O75800 440 aa17.39■□□□□ 0.37
SDHA-215ENST00000512962 TERF2IPQ9NYB0 399 aa17.39■□□□□ 0.37
SDHA-215ENST00000512962 KIF20BQ96Q89 1820 aa17.39■□□□□ 0.37
SDHA-215ENST00000512962 ARFGEF1Q9Y6D6 1849 aa17.39■□□□□ 0.37
SDHA-215ENST00000512962 C4AP0C0L4 1744 aa17.38■□□□□ 0.37
SDHA-215ENST00000512962 ITPK1Q13572 414 aa17.38■□□□□ 0.37
SDHA-215ENST00000512962 RBM26Q5T8P6 1007 aaKnown RBP17.38■□□□□ 0.37
SDHA-215ENST00000512962 COG3Q96JB2 828 aa17.38■□□□□ 0.37
SDHA-215ENST00000512962 PCDH11XQ9BZA7 1347 aa17.38■□□□□ 0.37
SDHA-215ENST00000512962 PCDH11YQ9BZA8 1340 aa17.38■□□□□ 0.37
SDHA-215ENST00000512962 PCNTO95613 3336 aa17.38■□□□□ 0.37
SDHA-215ENST00000512962 C10orf71Q711Q0 1435 aa17.38■□□□□ 0.37
SDHA-215ENST00000512962 SPDYE16A6NNV3 312 aaPredicted RBP17.37■□□□□ 0.37
SDHA-215ENST00000512962 NEUROD1Q13562 356 aa17.37■□□□□ 0.37
SDHA-215ENST00000512962 PIGBQ92521 554 aa17.37■□□□□ 0.37
SDHA-215ENST00000512962 COL5A3P25940 1745 aaPredicted RBP17.37■□□□□ 0.37
SDHA-215ENST00000512962 KCPQ6ZWJ8 1503 aa17.37■□□□□ 0.37
SDHA-215ENST00000512962 A0A0G2JLW4 131 aa17.36■□□□□ 0.37
SDHA-215ENST00000512962 BRPF1P55201 1214 aaPredicted RBP17.36■□□□□ 0.37
SDHA-215ENST00000512962 TMEM132AQ24JP5 1023 aa17.36■□□□□ 0.37
SDHA-215ENST00000512962 HSP90AB2PQ58FF8 381 aa17.36■□□□□ 0.37
SDHA-215ENST00000512962 RAPGEF4Q8WZA2 1011 aa17.36■□□□□ 0.37
SDHA-215ENST00000512962 KLRG1Q96E93 195 aa17.36■□□□□ 0.37
SDHA-215ENST00000512962 CGNL1Q0VF96 1302 aa17.36■□□□□ 0.37
SDHA-215ENST00000512962 MMP10P09238 476 aa17.35■□□□□ 0.37
SDHA-215ENST00000512962 TATP17735 454 aaPredicted RBP17.35■□□□□ 0.37
SDHA-215ENST00000512962 SSFA2P28290 1259 aa17.35■□□□□ 0.37
SDHA-215ENST00000512962 JMYQ8N9B5 988 aa17.35■□□□□ 0.37
SDHA-215ENST00000512962 CARD11Q9BXL7 1154 aa17.35■□□□□ 0.37
SDHA-215ENST00000512962 BCS1LQ9Y276 419 aa17.35■□□□□ 0.37
SDHA-215ENST00000512962 SBF1O95248 1867 aa17.34■□□□□ 0.37
SDHA-215ENST00000512962 NSD3Q9BZ95 1437 aa17.34■□□□□ 0.37
SDHA-215ENST00000512962 ANKRD26Q9UPS8 1709 aa17.33■□□□□ 0.37
SDHA-215ENST00000512962 TNRC6CQ9HCJ0 1690 aaKnown RBP17.33■□□□□ 0.37
SDHA-215ENST00000512962 NCAPD2Q15021 1401 aa17.33■□□□□ 0.36
SDHA-215ENST00000512962 GNPATO15228 680 aa17.33■□□□□ 0.36
SDHA-215ENST00000512962 L3MBTL3Q96JM7 780 aaPredicted RBP17.33■□□□□ 0.36
SDHA-215ENST00000512962 TESK2Q96S53 571 aa17.33■□□□□ 0.36
SDHA-215ENST00000512962 GGNBP2Q9H3C7 697 aa17.33■□□□□ 0.36
SDHA-215ENST00000512962 SMG6Q86US8 1419 aaKnown RBP17.32■□□□□ 0.36
SDHA-215ENST00000512962 INSRP06213 1382 aa17.32■□□□□ 0.36
SDHA-215ENST00000512962 LOC102724428A0A0B4J2F2 783 aa17.32■□□□□ 0.36
SDHA-215ENST00000512962 SIK1P57059 783 aa17.32■□□□□ 0.36
SDHA-215ENST00000512962 ASAP1Q9ULH1 1129 aa17.32■□□□□ 0.36
SDHA-215ENST00000512962 COLQQ9Y215 455 aaPredicted RBP17.32■□□□□ 0.36
SDHA-215ENST00000512962 MYH14Q7Z406 1995 aaKnown RBP17.31■□□□□ 0.36
SDHA-215ENST00000512962 FYB1O15117 783 aa17.31■□□□□ 0.36
SDHA-215ENST00000512962 DPEP1P16444 411 aa17.31■□□□□ 0.36
SDHA-215ENST00000512962 ARHGAP27Q6ZUM4 889 aa17.31■□□□□ 0.36
SDHA-215ENST00000512962 RBM46Q8TBY0 533 aaKnown RBP17.31■□□□□ 0.36
SDHA-215ENST00000512962 SMARCC1Q92922 1105 aaPredicted RBP17.31■□□□□ 0.36
SDHA-215ENST00000512962 KDRP35968 1356 aa17.3■□□□□ 0.36
SDHA-215ENST00000512962 KCNA3P22001 575 aa17.3■□□□□ 0.36
SDHA-215ENST00000512962 TMEM92Q6UXU6 159 aa17.3■□□□□ 0.36
SDHA-215ENST00000512962 GPIHBP1Q8IV16 184 aa17.3■□□□□ 0.36
SDHA-215ENST00000512962 ZNF831Q5JPB2 1677 aa17.29■□□□□ 0.36
SDHA-215ENST00000512962 C9orf131Q5VYM1 1079 aa17.29■□□□□ 0.36
SDHA-215ENST00000512962 TNS4Q8IZW8 715 aa17.29■□□□□ 0.36
SDHA-215ENST00000512962 DCBLD2Q96PD2 775 aa17.29■□□□□ 0.36
SDHA-215ENST00000512962 SLC4A9Q96Q91 983 aa17.29■□□□□ 0.36
SDHA-215ENST00000512962 FLT4P35916 1363 aa17.28■□□□□ 0.36
SDHA-215ENST00000512962 SEC24BO95487 1268 aa17.28■□□□□ 0.36
SDHA-215ENST00000512962 PUS7Q96PZ0 661 aaKnown RBP17.28■□□□□ 0.36
SDHA-215ENST00000512962 PRELPP51888 382 aa17.27■□□□□ 0.36
SDHA-215ENST00000512962 TGFB2P61812 414 aa17.27■□□□□ 0.36
SDHA-215ENST00000512962 FCHSD2O94868 740 aa17.26■□□□□ 0.35
SDHA-215ENST00000512962 ATP6V1AP38606 617 aa17.26■□□□□ 0.35
SDHA-215ENST00000512962 ATG3Q9NT62 314 aa17.26■□□□□ 0.35
SDHA-215ENST00000512962 EMILIN1Q9Y6C2 1016 aa17.26■□□□□ 0.35
SDHA-215ENST00000512962 ADAMTS7Q9UKP4 1686 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms