RNA–Protein interactions for RNA: ENST00000512725.5

DDR1-269, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 539 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-269ENST00000512725 TTLL6Q8N841 843 aa21.84■■□□□ 1.09
DDR1-269ENST00000512725 ZC3H4Q9UPT8 1303 aaKnown RBP21.83■■□□□ 1.09
DDR1-269ENST00000512725 NFIXQ14938 502 aa21.83■■□□□ 1.09
DDR1-269ENST00000512725 C2CD5Q86YS7 1000 aa21.83■■□□□ 1.09
DDR1-269ENST00000512725 SOS1Q07889 1333 aaPredicted RBP21.82■■□□□ 1.08
DDR1-269ENST00000512725 SERPINB2P05120 415 aa21.82■■□□□ 1.08
DDR1-269ENST00000512725 SLC39A6Q13433 755 aa21.82■■□□□ 1.08
DDR1-269ENST00000512725 BICDL1Q6ZP65 573 aa21.82■■□□□ 1.08
DDR1-269ENST00000512725 PANK3Q9H999 370 aa21.82■■□□□ 1.08
DDR1-269ENST00000512725 ZNF219Q9P2Y4 722 aaPredicted RBP21.82■■□□□ 1.08
DDR1-269ENST00000512725 AFDNP55196 1824 aaKnown RBP21.82■■□□□ 1.08
DDR1-269ENST00000512725 CCDC88AQ3V6T2 1871 aa21.81■■□□□ 1.08
DDR1-269ENST00000512725 H0YIN7 160 aa21.81■■□□□ 1.08
DDR1-269ENST00000512725 NARFQ9UHQ1 456 aa21.81■■□□□ 1.08
DDR1-269ENST00000512725 COL15A1P39059 1388 aa21.8■■□□□ 1.08
DDR1-269ENST00000512725 SLC52A2Q9HAB3 445 aa21.8■■□□□ 1.08
DDR1-269ENST00000512725 SCN11AQ9UI33 1791 aa21.79■■□□□ 1.08
DDR1-269ENST00000512725 CYP19A1P11511 503 aaPredicted RBP21.79■■□□□ 1.08
DDR1-269ENST00000512725 AKAP4Q5JQC9 854 aa21.79■■□□□ 1.08
DDR1-269ENST00000512725 DPY19L2Q6NUT2 758 aa21.79■■□□□ 1.08
DDR1-269ENST00000512725 LGR6Q9HBX8 967 aa21.79■■□□□ 1.08
DDR1-269ENST00000512725 ZBTB1Q9Y2K1 713 aa21.79■■□□□ 1.08
DDR1-269ENST00000512725 TIAM2Q8IVF5 1701 aa21.79■■□□□ 1.08
DDR1-269ENST00000512725 ADAMTS7Q9UKP4 1686 aa21.79■■□□□ 1.08
DDR1-269ENST00000512725 CANXP27824 592 aaKnown RBP21.78■■□□□ 1.08
DDR1-269ENST00000512725 ZNF622Q969S3 477 aaKnown RBP eCLIP21.78■■□□□ 1.08
DDR1-269ENST00000512725 NFKBIEO00221 500 aa21.76■■□□□ 1.07
DDR1-269ENST00000512725 RNMTO43148 476 aaKnown RBP21.75■■□□□ 1.07
DDR1-269ENST00000512725 BCL2L12Q9HB09 334 aa21.75■■□□□ 1.07
DDR1-269ENST00000512725 ZNF330Q9Y3S2 320 aaPredicted RBP21.75■■□□□ 1.07
DDR1-269ENST00000512725 CARMIL3Q8ND23 1372 aa21.74■■□□□ 1.07
DDR1-269ENST00000512725 C21orf2O43822 256 aa21.74■■□□□ 1.07
DDR1-269ENST00000512725 ERFEQ4G0M1 354 aa21.74■■□□□ 1.07
DDR1-269ENST00000512725 CCDC24Q8N4L8 307 aa21.74■■□□□ 1.07
DDR1-269ENST00000512725 MKRN1Q9UHC7 482 aaKnown RBP21.74■■□□□ 1.07
DDR1-269ENST00000512725 DLEC1Q9Y238 1755 aa21.74■■□□□ 1.07
DDR1-269ENST00000512725 NPHP1O15259 732 aa21.73■■□□□ 1.07
DDR1-269ENST00000512725 HMOX1P09601 288 aa21.73■■□□□ 1.07
DDR1-269ENST00000512725 IL13P35225 146 aa21.73■■□□□ 1.07
DDR1-269ENST00000512725 NRXN2Q9P2S2 1712 aa21.72■■□□□ 1.07
DDR1-269ENST00000512725 POTECB2RU33 542 aa21.71■■□□□ 1.07
DDR1-269ENST00000512725 KNSTRNQ9Y448 316 aa21.71■■□□□ 1.07
DDR1-269ENST00000512725 TTC5Q8N0Z6 440 aa21.7■■□□□ 1.06
DDR1-269ENST00000512725 VIRMAQ69YN4 1812 aaKnown RBP21.69■■□□□ 1.06
DDR1-269ENST00000512725 A0A087WZG4 1122 aa21.69■■□□□ 1.06
DDR1-269ENST00000512725 STARD3NLO95772 234 aa21.69■■□□□ 1.06
DDR1-269ENST00000512725 PDE6BP35913 854 aa21.69■■□□□ 1.06
DDR1-269ENST00000512725 EIF4G2P78344 907 aaKnown RBP eCLIP21.69■■□□□ 1.06
DDR1-269ENST00000512725 TBC1D9BQ66K14 1250 aa21.69■■□□□ 1.06
DDR1-269ENST00000512725 CHADLQ6NUI6 762 aa21.69■■□□□ 1.06
DDR1-269ENST00000512725 HSPA5P11021 654 aaKnown RBP21.68■■□□□ 1.06
DDR1-269ENST00000512725 NPM2Q86SE8 214 aaKnown RBP21.67■■□□□ 1.06
DDR1-269ENST00000512725 VSIG10Q8N0Z9 540 aa21.67■■□□□ 1.06
DDR1-269ENST00000512725 CREBZFQ9NS37 354 aa21.67■■□□□ 1.06
DDR1-269ENST00000512725 DDNO94850 711 aaPredicted RBP21.66■■□□□ 1.06
DDR1-269ENST00000512725 POTEIP0CG38 1075 aa21.66■■□□□ 1.06
DDR1-269ENST00000512725 POTEJP0CG39 1038 aa21.66■■□□□ 1.06
DDR1-269ENST00000512725 MTHFSDQ2M296 383 aaKnown RBP21.66■■□□□ 1.06
DDR1-269ENST00000512725 TBC1D2BQ9UPU7 963 aa21.66■■□□□ 1.06
DDR1-269ENST00000512725 BRIP1Q9BX63 1249 aa21.65■■□□□ 1.06
DDR1-269ENST00000512725 TAOK3Q9H2K8 898 aa21.65■■□□□ 1.06
DDR1-269ENST00000512725 TIMELESSQ9UNS1 1208 aa21.65■■□□□ 1.06
DDR1-269ENST00000512725 MRC1P22897 1456 aa21.64■■□□□ 1.06
DDR1-269ENST00000512725 EIF5P55010 431 aaKnown RBP21.64■■□□□ 1.05
DDR1-269ENST00000512725 PRR5LQ6MZQ0 368 aa21.64■■□□□ 1.05
DDR1-269ENST00000512725 PDZRN3Q9UPQ7 1066 aa21.64■■□□□ 1.05
DDR1-269ENST00000512725 DICER1Q9UPY3 1922 aaKnown RBP21.64■■□□□ 1.05
DDR1-269ENST00000512725 ANKRD31Q8N7Z5 1873 aa21.64■■□□□ 1.05
DDR1-269ENST00000512725 AIDAQ96BJ3 306 aa21.63■■□□□ 1.05
DDR1-269ENST00000512725 CACNA1SQ13698 1873 aa21.62■■□□□ 1.05
DDR1-269ENST00000512725 FOXN1O15353 648 aa21.62■■□□□ 1.05
DDR1-269ENST00000512725 ST5P78524 1137 aa21.62■■□□□ 1.05
DDR1-269ENST00000512725 CNBD1Q8NA66 436 aa21.62■■□□□ 1.05
DDR1-269ENST00000512725 FER1L6Q2WGJ9 1857 aa21.62■■□□□ 1.05
DDR1-269ENST00000512725 TEFQ10587 303 aa21.61■■□□□ 1.05
DDR1-269ENST00000512725 CNKSR1Q969H4 720 aa21.61■■□□□ 1.05
DDR1-269ENST00000512725 SETDB2Q96T68 719 aa21.61■■□□□ 1.05
DDR1-269ENST00000512725 COL11A2P13942 1736 aaPredicted RBP21.6■■□□□ 1.05
DDR1-269ENST00000512725 TRIM26Q12899 539 aaPredicted RBP21.6■■□□□ 1.05
DDR1-269ENST00000512725 EAPPQ56P03 285 aaPredicted RBP21.6■■□□□ 1.05
DDR1-269ENST00000512725 ZNF496Q96IT1 587 aaPredicted RBP21.6■■□□□ 1.05
DDR1-269ENST00000512725 PRPF40BQ6NWY9 871 aaKnown RBP21.59■■□□□ 1.05
DDR1-269ENST00000512725 PCGF6Q9BYE7 350 aa21.59■■□□□ 1.05
DDR1-269ENST00000512725 CLEC11AQ9Y240 323 aa21.59■■□□□ 1.05
DDR1-269ENST00000512725 IQCA1LA6NCM1 817 aa21.58■■□□□ 1.05
DDR1-269ENST00000512725 DIAPH1O60610 1272 aaKnown RBP21.58■■□□□ 1.05
DDR1-269ENST00000512725 SOGA3Q5TF21 947 aa21.58■■□□□ 1.05
DDR1-269ENST00000512725 TEX13AQ9BXU3 409 aaPredicted RBP21.58■■□□□ 1.05
DDR1-269ENST00000512725 UBR2Q8IWV8 1755 aa21.58■■□□□ 1.04
DDR1-269ENST00000512725 CNTNAP1P78357 1384 aa21.58■■□□□ 1.04
DDR1-269ENST00000512725 LTBP3Q9NS15 1303 aa21.57■■□□□ 1.04
DDR1-269ENST00000512725 SLX4Q8IY92 1834 aa21.57■■□□□ 1.04
DDR1-269ENST00000512725 A1BGP04217 495 aa21.57■■□□□ 1.04
DDR1-269ENST00000512725 CNGB1Q14028 1251 aaPredicted RBP21.57■■□□□ 1.04
DDR1-269ENST00000512725 STYK1Q6J9G0 422 aa21.57■■□□□ 1.04
DDR1-269ENST00000512725 LDHDQ86WU2 507 aa21.57■■□□□ 1.04
DDR1-269ENST00000512725 HEG1Q9ULI3 1381 aa21.57■■□□□ 1.04
DDR1-269ENST00000512725 SCN7AQ01118 1682 aa21.56■■□□□ 1.04
DDR1-269ENST00000512725 IL6STP40189 918 aaPredicted RBP21.56■■□□□ 1.04
DDR1-269ENST00000512725 CTCFP49711 727 aaPredicted RBP21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms