RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 GLTPD2A6NH11 291 aa26.23■■□□□ 1.79
HMGCS1-206ENST00000511774 POTECB2RU33 542 aa26.23■■□□□ 1.79
HMGCS1-206ENST00000511774 NFIXQ14938 502 aa26.23■■□□□ 1.79
HMGCS1-206ENST00000511774 ZC3H4Q9UPT8 1303 aaKnown RBP26.22■■□□□ 1.79
HMGCS1-206ENST00000511774 BCL2L12Q9HB09 334 aa26.22■■□□□ 1.79
HMGCS1-206ENST00000511774 CARMIL3Q8ND23 1372 aa26.21■■□□□ 1.79
HMGCS1-206ENST00000511774 VIRMAQ69YN4 1812 aaKnown RBP26.21■■□□□ 1.79
HMGCS1-206ENST00000511774 LMNB1P20700 586 aa26.21■■□□□ 1.79
HMGCS1-206ENST00000511774 C1orf141Q5JVX7 400 aa26.21■■□□□ 1.79
HMGCS1-206ENST00000511774 NFKBIEO00221 500 aa26.2■■□□□ 1.78
HMGCS1-206ENST00000511774 VEGFAP15692 232 aaPredicted RBP26.2■■□□□ 1.78
HMGCS1-206ENST00000511774 POLR3GLQ9BT43 218 aa26.2■■□□□ 1.78
HMGCS1-206ENST00000511774 ZPR1O75312 459 aa26.19■■□□□ 1.78
HMGCS1-206ENST00000511774 CYP19A1P11511 503 aaPredicted RBP26.19■■□□□ 1.78
HMGCS1-206ENST00000511774 ANKRD31Q8N7Z5 1873 aa26.17■■□□□ 1.78
HMGCS1-206ENST00000511774 SLC39A6Q13433 755 aa26.17■■□□□ 1.78
HMGCS1-206ENST00000511774 SULT6B1Q6IMI4 303 aa26.17■■□□□ 1.78
HMGCS1-206ENST00000511774 LGR6Q9HBX8 967 aa26.17■■□□□ 1.78
HMGCS1-206ENST00000511774 NARFQ9UHQ1 456 aa26.17■■□□□ 1.78
HMGCS1-206ENST00000511774 ZBTB1Q9Y2K1 713 aa26.16■■□□□ 1.78
HMGCS1-206ENST00000511774 COL15A1P39059 1388 aa26.16■■□□□ 1.78
HMGCS1-206ENST00000511774 SERPINB2P05120 415 aa26.15■■□□□ 1.78
HMGCS1-206ENST00000511774 TTLL6Q8N841 843 aa26.15■■□□□ 1.78
HMGCS1-206ENST00000511774 MRC1P22897 1456 aa26.15■■□□□ 1.78
HMGCS1-206ENST00000511774 DICER1Q9UPY3 1922 aaKnown RBP26.14■■□□□ 1.78
HMGCS1-206ENST00000511774 SLC52A2Q9HAB3 445 aa26.14■■□□□ 1.78
HMGCS1-206ENST00000511774 C2CD5Q86YS7 1000 aa26.13■■□□□ 1.77
HMGCS1-206ENST00000511774 PANK3Q9H999 370 aa26.13■■□□□ 1.77
HMGCS1-206ENST00000511774 COL11A2P13942 1736 aaPredicted RBP26.13■■□□□ 1.77
HMGCS1-206ENST00000511774 FER1L6Q2WGJ9 1857 aa26.13■■□□□ 1.77
HMGCS1-206ENST00000511774 IL13P35225 146 aa26.12■■□□□ 1.77
HMGCS1-206ENST00000511774 POTEIP0CG38 1075 aa26.09■■□□□ 1.77
HMGCS1-206ENST00000511774 POTEJP0CG39 1038 aa26.09■■□□□ 1.77
HMGCS1-206ENST00000511774 AKAP4Q5JQC9 854 aa26.09■■□□□ 1.77
HMGCS1-206ENST00000511774 UBR2Q8IWV8 1755 aa26.09■■□□□ 1.77
HMGCS1-206ENST00000511774 RNMTO43148 476 aaKnown RBP26.08■■□□□ 1.77
HMGCS1-206ENST00000511774 BICDL1Q6ZP65 573 aa26.07■■□□□ 1.76
HMGCS1-206ENST00000511774 H0YIN7 160 aa26.06■■□□□ 1.76
HMGCS1-206ENST00000511774 MORC1Q86VD1 984 aa26.06■■□□□ 1.76
HMGCS1-206ENST00000511774 CCDC24Q8N4L8 307 aa26.06■■□□□ 1.76
HMGCS1-206ENST00000511774 ZNF219Q9P2Y4 722 aaPredicted RBP26.06■■□□□ 1.76
HMGCS1-206ENST00000511774 MKRN1Q9UHC7 482 aaKnown RBP26.05■■□□□ 1.76
HMGCS1-206ENST00000511774 CACNA1SQ13698 1873 aa26.04■■□□□ 1.76
HMGCS1-206ENST00000511774 C21orf2O43822 256 aa26.04■■□□□ 1.76
HMGCS1-206ENST00000511774 CANXP27824 592 aaKnown RBP26.04■■□□□ 1.76
HMGCS1-206ENST00000511774 SCN7AQ01118 1682 aa26.03■■□□□ 1.76
HMGCS1-206ENST00000511774 SLX4Q8IY92 1834 aa26.03■■□□□ 1.76
HMGCS1-206ENST00000511774 TBC1D9BQ66K14 1250 aa26.03■■□□□ 1.76
HMGCS1-206ENST00000511774 EIF5P55010 431 aaKnown RBP26.02■■□□□ 1.76
HMGCS1-206ENST00000511774 ZNF622Q969S3 477 aaKnown RBP eCLIP26.02■■□□□ 1.76
HMGCS1-206ENST00000511774 ERFEQ4G0M1 354 aa26.01■■□□□ 1.75
HMGCS1-206ENST00000511774 CREBZFQ9NS37 354 aa26.01■■□□□ 1.75
HMGCS1-206ENST00000511774 FOXN1O15353 648 aa26■■□□□ 1.75
HMGCS1-206ENST00000511774 DDNO94850 711 aaPredicted RBP26■■□□□ 1.75
HMGCS1-206ENST00000511774 HMOX1P09601 288 aa26■■□□□ 1.75
HMGCS1-206ENST00000511774 CHADLQ6NUI6 762 aa26■■□□□ 1.75
HMGCS1-206ENST00000511774 DPY19L2Q6NUT2 758 aa26■■□□□ 1.75
HMGCS1-206ENST00000511774 MTHFSDQ2M296 383 aaKnown RBP25.99■■□□□ 1.75
HMGCS1-206ENST00000511774 PRR5LQ6MZQ0 368 aa25.99■■□□□ 1.75
HMGCS1-206ENST00000511774 VSIG10Q8N0Z9 540 aa25.99■■□□□ 1.75
HMGCS1-206ENST00000511774 HSPA5P11021 654 aaKnown RBP25.97■■□□□ 1.75
HMGCS1-206ENST00000511774 BRIP1Q9BX63 1249 aa25.97■■□□□ 1.75
HMGCS1-206ENST00000511774 LTBP3Q9NS15 1303 aa25.96■■□□□ 1.75
HMGCS1-206ENST00000511774 ARFGEF2Q9Y6D5 1785 aa25.96■■□□□ 1.75
HMGCS1-206ENST00000511774 CNTNAP1P78357 1384 aa25.95■■□□□ 1.75
HMGCS1-206ENST00000511774 PASKQ96RG2 1323 aa25.94■■□□□ 1.74
HMGCS1-206ENST00000511774 TBC1D2BQ9UPU7 963 aa25.94■■□□□ 1.74
HMGCS1-206ENST00000511774 SIPA1L3O60292 1781 aaPredicted RBP25.93■■□□□ 1.74
HMGCS1-206ENST00000511774 PDE6BP35913 854 aa25.93■■□□□ 1.74
HMGCS1-206ENST00000511774 ZNF496Q96IT1 587 aaPredicted RBP25.93■■□□□ 1.74
HMGCS1-206ENST00000511774 TAOK3Q9H2K8 898 aa25.93■■□□□ 1.74
HMGCS1-206ENST00000511774 AMER1Q5JTC6 1135 aaPredicted RBP25.91■■□□□ 1.74
HMGCS1-206ENST00000511774 SCN4AP35499 1836 aa25.91■■□□□ 1.74
HMGCS1-206ENST00000511774 BCORQ6W2J9 1755 aa25.9■■□□□ 1.74
HMGCS1-206ENST00000511774 A0A087WZG4 1122 aa25.9■■□□□ 1.74
HMGCS1-206ENST00000511774 STARD3NLO95772 234 aa25.9■■□□□ 1.74
HMGCS1-206ENST00000511774 PRPF40BQ6NWY9 871 aaKnown RBP25.9■■□□□ 1.74
HMGCS1-206ENST00000511774 TIMELESSQ9UNS1 1208 aa25.9■■□□□ 1.74
HMGCS1-206ENST00000511774 VEGFBP49765 207 aa25.89■■□□□ 1.74
HMGCS1-206ENST00000511774 PDZRN3Q9UPQ7 1066 aa25.89■■□□□ 1.74
HMGCS1-206ENST00000511774 ZNF330Q9Y3S2 320 aaPredicted RBP25.89■■□□□ 1.74
HMGCS1-206ENST00000511774 HEG1Q9ULI3 1381 aa25.89■■□□□ 1.74
HMGCS1-206ENST00000511774 CAMTA2O94983 1202 aa25.88■■□□□ 1.73
HMGCS1-206ENST00000511774 SRGNP10124 158 aa25.88■■□□□ 1.73
HMGCS1-206ENST00000511774 TAF1DQ9H5J8 278 aaPredicted RBP25.88■■□□□ 1.73
HMGCS1-206ENST00000511774 PRDM10Q9NQV6 1147 aa25.88■■□□□ 1.73
HMGCS1-206ENST00000511774 ADAMTSL1Q8N6G6 1762 aa25.87■■□□□ 1.73
HMGCS1-206ENST00000511774 ITGBL1O95965 494 aaPredicted RBP25.87■■□□□ 1.73
HMGCS1-206ENST00000511774 A1BGP04217 495 aa25.87■■□□□ 1.73
HMGCS1-206ENST00000511774 EIF4G2P78344 907 aaKnown RBP eCLIP25.87■■□□□ 1.73
HMGCS1-206ENST00000511774 STYK1Q6J9G0 422 aa25.87■■□□□ 1.73
HMGCS1-206ENST00000511774 IL17REQ8NFR9 667 aa25.87■■□□□ 1.73
HMGCS1-206ENST00000511774 C7orf43Q8WVR3 580 aa25.87■■□□□ 1.73
HMGCS1-206ENST00000511774 L3MBTL3Q96JM7 780 aaPredicted RBP25.87■■□□□ 1.73
HMGCS1-206ENST00000511774 KNSTRNQ9Y448 316 aa25.87■■□□□ 1.73
HMGCS1-206ENST00000511774 LDHDQ86WU2 507 aa25.86■■□□□ 1.73
HMGCS1-206ENST00000511774 TTC5Q8N0Z6 440 aa25.86■■□□□ 1.73
HMGCS1-206ENST00000511774 ZNF790Q6PG37 636 aa25.85■■□□□ 1.73
HMGCS1-206ENST00000511774 CNBD1Q8NA66 436 aa25.85■■□□□ 1.73
HMGCS1-206ENST00000511774 CNKSR1Q969H4 720 aa25.85■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms